More than 300 homologs were found in PanDaTox collection
for query gene Snas_0625 on replicon NC_013947
Organism: Stackebrandtia nassauensis DSM 44728



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013947  Snas_0625  two component transcriptional regulator, LuxR family  100 
 
 
216 aa  424  1e-118  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.732521  normal 
 
 
-
 
NC_013595  Sros_5499  response regulator receiver protein  64.19 
 
 
213 aa  244  6.999999999999999e-64  Streptosporangium roseum DSM 43021  Bacteria  decreased coverage  0.00659712  normal  0.108677 
 
 
-
 
NC_012669  Bcav_0236  two component transcriptional regulator, LuxR family  59.09 
 
 
224 aa  241  7e-63  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_6351  two component LuxR family transcriptional regulator  55.61 
 
 
244 aa  238  4e-62  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_2469  two component transcriptional regulator, LuxR family  56.94 
 
 
214 aa  235  5.0000000000000005e-61  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.126163  normal 
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  54.38 
 
 
221 aa  218  7e-56  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal 
 
 
-
 
NC_013739  Cwoe_0262  two component transcriptional regulator, LuxR family  53.92 
 
 
225 aa  218  7e-56  Conexibacter woesei DSM 14684  Bacteria  normal  0.0721339  normal  0.623073 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  54.71 
 
 
226 aa  217  1e-55  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  52.63 
 
 
227 aa  215  5e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  53.95 
 
 
219 aa  211  7e-54  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  54.88 
 
 
219 aa  211  7.999999999999999e-54  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  50.68 
 
 
224 aa  211  1e-53  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  54.84 
 
 
215 aa  209  2e-53  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_009380  Strop_2458  response regulator receiver  53.49 
 
 
220 aa  209  3e-53  Salinispora tropica CNB-440  Bacteria  normal  0.0554598  normal 
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  52.29 
 
 
218 aa  209  3e-53  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  51.11 
 
 
226 aa  208  5e-53  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  52.97 
 
 
225 aa  208  5e-53  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_013947  Snas_3359  two component transcriptional regulator, LuxR family  53.02 
 
 
219 aa  207  1e-52  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0172663  normal 
 
 
-
 
NC_014210  Ndas_4652  two component transcriptional regulator, LuxR family  55.35 
 
 
219 aa  207  1e-52  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0949639  normal 
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  53 
 
 
224 aa  206  2e-52  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  51.33 
 
 
229 aa  206  2e-52  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  52.8 
 
 
234 aa  204  1e-51  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  50.92 
 
 
220 aa  201  6e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  50.69 
 
 
222 aa  199  1.9999999999999998e-50  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_1782  two component LuxR family transcriptional regulator  50.91 
 
 
230 aa  198  3.9999999999999996e-50  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.0025253 
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  50.92 
 
 
225 aa  198  5e-50  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_013595  Sros_5619  response regulator receiver protein  52.31 
 
 
226 aa  197  1.0000000000000001e-49  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0556461  normal  0.802866 
 
 
-
 
NC_013530  Xcel_0239  two component transcriptional regulator, LuxR family  50.23 
 
 
230 aa  197  1.0000000000000001e-49  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_1269  two component transcriptional regulator, LuxR family  50.91 
 
 
226 aa  196  2.0000000000000003e-49  Conexibacter woesei DSM 14684  Bacteria  normal  hitchhiker  0.00432991 
 
 
-
 
NC_013739  Cwoe_0549  two component transcriptional regulator, LuxR family  50.92 
 
 
220 aa  196  2.0000000000000003e-49  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_2842  two component transcriptional regulator, LuxR family  52 
 
 
226 aa  196  2.0000000000000003e-49  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.622781  decreased coverage  0.00305681 
 
 
-
 
NC_014210  Ndas_2190  two component transcriptional regulator, LuxR family  53.74 
 
 
218 aa  196  2.0000000000000003e-49  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000643495  hitchhiker  0.000215707 
 
 
-
 
NC_013131  Caci_7415  two component transcriptional regulator, LuxR family  49.54 
 
 
228 aa  196  2.0000000000000003e-49  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.933403  normal 
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  50.66 
 
 
226 aa  195  4.0000000000000005e-49  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  49.55 
 
 
221 aa  195  5.000000000000001e-49  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal 
 
 
-
 
NC_013131  Caci_1951  two component transcriptional regulator, LuxR family  52.05 
 
 
226 aa  193  1e-48  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0924411 
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  50.23 
 
 
221 aa  194  1e-48  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_009664  Krad_1981  two component transcriptional regulator, LuxR family  49.11 
 
 
230 aa  193  1e-48  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  48.85 
 
 
239 aa  194  1e-48  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_013739  Cwoe_0676  two component transcriptional regulator, LuxR family  52.34 
 
 
215 aa  193  2e-48  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  50.68 
 
 
221 aa  192  2e-48  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_013235  Namu_0651  two component transcriptional regulator, LuxR family  51.1 
 
 
241 aa  192  2e-48  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  49.77 
 
 
221 aa  193  2e-48  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  50 
 
 
215 aa  193  2e-48  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_013595  Sros_2533  response regulator receiver protein  48.18 
 
 
220 aa  192  3e-48  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.495874 
 
 
-
 
NC_011886  Achl_2270  two component transcriptional regulator, LuxR family  50 
 
 
242 aa  192  3e-48  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000000113212 
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  49.11 
 
 
225 aa  192  4e-48  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_013595  Sros_8243  response regulator receiver protein  52.27 
 
 
217 aa  191  5e-48  Streptosporangium roseum DSM 43021  Bacteria  normal  0.931194  normal  0.230681 
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  49.09 
 
 
230 aa  191  5e-48  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_6963  two component transcriptional regulator, LuxR family  49.1 
 
 
225 aa  191  6e-48  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.029709  normal 
 
 
-
 
NC_013947  Snas_1740  two component transcriptional regulator, LuxR family  50.93 
 
 
228 aa  191  7e-48  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_2599  two component transcriptional regulator, LuxR family  50.24 
 
 
211 aa  191  9e-48  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_11600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  48.39 
 
 
225 aa  190  1e-47  Brachybacterium faecium DSM 4810  Bacteria  decreased coverage  0.00120804  n/a   
 
 
-
 
NC_013595  Sros_0609  response regulator receiver protein  48.17 
 
 
218 aa  190  1e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0404  two component transcriptional regulator, LuxR family  51.87 
 
 
218 aa  190  1e-47  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0987348  normal 
 
 
-
 
NC_014210  Ndas_1477  two component transcriptional regulator, LuxR family  48.88 
 
 
234 aa  190  1e-47  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.594471  normal 
 
 
-
 
NC_013510  Tcur_4491  two component transcriptional regulator, LuxR family  51.56 
 
 
225 aa  190  1e-47  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  49.55 
 
 
220 aa  190  2e-47  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_008697  Noca_4902  response regulator receiver  50.93 
 
 
216 aa  189  2e-47  Nocardioides sp. JS614  Bacteria  normal  0.443208  normal  0.676579 
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  49.07 
 
 
217 aa  190  2e-47  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000794288  unclonable  0.0000000332591 
 
 
-
 
NC_013441  Gbro_4119  response regulator receiver  49.33 
 
 
230 aa  189  2e-47  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_0544  two component transcriptional regulator, LuxR family  51.64 
 
 
215 aa  190  2e-47  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  48.39 
 
 
218 aa  189  2.9999999999999997e-47  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_013530  Xcel_2601  two component transcriptional regulator, LuxR family  50.67 
 
 
234 aa  189  2.9999999999999997e-47  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.1212  n/a   
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  49.55 
 
 
225 aa  189  4e-47  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_014210  Ndas_2087  two component transcriptional regulator, LuxR family  51.17 
 
 
247 aa  188  4e-47  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.73112  normal 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  47.25 
 
 
218 aa  188  5e-47  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_013947  Snas_3287  two component transcriptional regulator, LuxR family  47.47 
 
 
233 aa  188  5e-47  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0842926  normal  0.330639 
 
 
-
 
NC_013521  Sked_08490  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  48.02 
 
 
236 aa  188  5e-47  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.199706  normal  0.526513 
 
 
-
 
NC_013510  Tcur_1300  two component transcriptional regulator, LuxR family  49.07 
 
 
215 aa  188  5e-47  Thermomonospora curvata DSM 43183  Bacteria  normal  0.145336  n/a   
 
 
-
 
NC_013595  Sros_0199  response regulator receiver protein  50.47 
 
 
213 aa  187  8e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_4662  two component transcriptional regulator, LuxR family  49.77 
 
 
221 aa  187  1e-46  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.142047  hitchhiker  0.00679998 
 
 
-
 
NC_009921  Franean1_4684  two component LuxR family transcriptional regulator  50.7 
 
 
223 aa  187  1e-46  Frankia sp. EAN1pec  Bacteria  normal  0.51425  normal 
 
 
-
 
NC_013947  Snas_3639  two component transcriptional regulator, LuxR family  49.77 
 
 
215 aa  187  1e-46  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.274763  normal 
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  49.32 
 
 
229 aa  187  1e-46  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  49.11 
 
 
218 aa  186  2e-46  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_4115  response regulator receiver protein  51.66 
 
 
216 aa  186  2e-46  Streptosporangium roseum DSM 43021  Bacteria  normal  0.071707  normal  0.0608108 
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  50.68 
 
 
227 aa  186  2e-46  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  50 
 
 
222 aa  186  3e-46  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal 
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  50.68 
 
 
223 aa  186  3e-46  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal 
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  49.1 
 
 
241 aa  186  3e-46  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_012803  Mlut_21900  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  50.68 
 
 
230 aa  186  3e-46  Micrococcus luteus NCTC 2665  Bacteria  hitchhiker  0.00486265  n/a   
 
 
-
 
NC_014151  Cfla_0857  two component transcriptional regulator, LuxR family  48.37 
 
 
219 aa  185  5e-46  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0762303  normal 
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  46.54 
 
 
224 aa  185  6e-46  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_013204  Elen_2822  two component transcriptional regulator, LuxR family  48.65 
 
 
228 aa  185  6e-46  Eggerthella lenta DSM 2243  Bacteria  normal  0.0415698  normal  0.590713 
 
 
-
 
NC_013093  Amir_4511  two component transcriptional regulator, LuxR family  50.23 
 
 
226 aa  185  6e-46  Actinosynnema mirum DSM 43827  Bacteria  normal  0.11054  n/a   
 
 
-
 
NC_014151  Cfla_3337  two component transcriptional regulator, LuxR family  49.55 
 
 
254 aa  184  7e-46  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0952095  normal  0.130531 
 
 
-
 
NC_013739  Cwoe_3768  two component transcriptional regulator, LuxR family  50 
 
 
223 aa  184  8e-46  Conexibacter woesei DSM 14684  Bacteria  normal  0.28303  normal  0.763501 
 
 
-
 
NC_013170  Ccur_01320  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  45.66 
 
 
261 aa  184  9e-46  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_6405  two component transcriptional regulator, LuxR family  48.64 
 
 
225 aa  184  1.0000000000000001e-45  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_1618  two component transcriptional regulator, LuxR family  50.46 
 
 
220 aa  183  1.0000000000000001e-45  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_2015  two component transcriptional regulator, LuxR family  47.81 
 
 
232 aa  183  2.0000000000000003e-45  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.706703  n/a   
 
 
-
 
NC_009767  Rcas_1142  two component LuxR family transcriptional regulator  45.5 
 
 
222 aa  183  2.0000000000000003e-45  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.661777  normal 
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  47.49 
 
 
225 aa  183  2.0000000000000003e-45  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  47.53 
 
 
239 aa  183  2.0000000000000003e-45  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_3988  two component transcriptional regulator, LuxR family  50 
 
 
228 aa  183  2.0000000000000003e-45  Conexibacter woesei DSM 14684  Bacteria  normal  0.0354189  normal  0.736565 
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  48.18 
 
 
220 aa  182  3e-45  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_3251  response regulator receiver protein  47.06 
 
 
221 aa  182  4.0000000000000006e-45  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0793449  normal 
 
 
-
 
NC_013947  Snas_0541  two component transcriptional regulator, LuxR family  47 
 
 
221 aa  182  4.0000000000000006e-45  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.318618  normal 
 
 
-
 
NC_012669  Bcav_2449  two component transcriptional regulator, LuxR family  49.32 
 
 
220 aa  182  4.0000000000000006e-45  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.729355  normal 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>