More than 300 homologs were found in PanDaTox collection
for query gene Snas_0503 on replicon NC_013947
Organism: Stackebrandtia nassauensis DSM 44728



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013947  Snas_0503  two component transcriptional regulator, LuxR family  100 
 
 
202 aa  392  1e-108  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.900292 
 
 
-
 
NC_013595  Sros_4334  response regulator receiver protein  77.5 
 
 
200 aa  276  1e-73  Streptosporangium roseum DSM 43021  Bacteria  normal  0.574495  normal  0.636855 
 
 
-
 
NC_013159  Svir_11510  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  64.5 
 
 
203 aa  251  4.0000000000000004e-66  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.575058  normal 
 
 
-
 
NC_013739  Cwoe_5628  two component transcriptional regulator, LuxR family  64.5 
 
 
200 aa  236  1e-61  Conexibacter woesei DSM 14684  Bacteria  normal  0.946433  normal  0.876589 
 
 
-
 
NC_014165  Tbis_0907  LuxR family two component transcriptional regulator  55.5 
 
 
197 aa  211  7.999999999999999e-54  Thermobispora bispora DSM 43833  Bacteria  normal  0.365102  normal 
 
 
-
 
NC_013521  Sked_06600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  58 
 
 
200 aa  206  2e-52  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.680692  normal 
 
 
-
 
NC_014210  Ndas_1079  two component transcriptional regulator, LuxR family  52.02 
 
 
200 aa  199  1.9999999999999998e-50  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.782019  normal  0.0499592 
 
 
-
 
NC_013510  Tcur_1624  two component transcriptional regulator, LuxR family  54 
 
 
201 aa  196  1.0000000000000001e-49  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0305603  n/a   
 
 
-
 
NC_013595  Sros_1680  response regulator receiver protein  51.5 
 
 
197 aa  194  7e-49  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.516841 
 
 
-
 
NC_013521  Sked_03860  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  51 
 
 
204 aa  194  8.000000000000001e-49  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0649288  normal  0.281143 
 
 
-
 
NC_012669  Bcav_0286  two component transcriptional regulator, LuxR family  52.74 
 
 
203 aa  193  1e-48  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.784033  normal  0.130384 
 
 
-
 
NC_012669  Bcav_1588  two component transcriptional regulator, LuxR family  52.48 
 
 
201 aa  192  3e-48  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.117504  normal 
 
 
-
 
NC_007333  Tfu_0288  LuxR response regulator receiver  50 
 
 
201 aa  187  1e-46  Thermobifida fusca YX  Bacteria  normal  0.0935286  n/a   
 
 
-
 
NC_014158  Tpau_3534  two component transcriptional regulator, LuxR family  50.49 
 
 
206 aa  184  7e-46  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_014211  Ndas_5200  two component transcriptional regulator, LuxR family  50 
 
 
223 aa  184  8e-46  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0156716  normal  0.415255 
 
 
-
 
NC_013131  Caci_1897  two component transcriptional regulator, LuxR family  48 
 
 
200 aa  183  1.0000000000000001e-45  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.299419  normal 
 
 
-
 
NC_009921  Franean1_0528  two component LuxR family transcriptional regulator  49 
 
 
201 aa  183  1.0000000000000001e-45  Frankia sp. EAN1pec  Bacteria  normal  0.653057  normal 
 
 
-
 
NC_013172  Bfae_06340  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  47.14 
 
 
211 aa  181  5.0000000000000004e-45  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_0118  two component transcriptional regulator, LuxR family  47.03 
 
 
205 aa  181  6e-45  Jonesia denitrificans DSM 20603  Bacteria  normal  0.137239  normal  0.184056 
 
 
-
 
NC_009674  Bcer98_3871  two component LuxR family transcriptional regulator  43.5 
 
 
200 aa  181  6e-45  Bacillus cytotoxicus NVH 391-98  Bacteria  hitchhiker  0.00685623  n/a   
 
 
-
 
NC_013510  Tcur_2957  two component transcriptional regulator, LuxR family  51 
 
 
201 aa  181  8.000000000000001e-45  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00144362  n/a   
 
 
-
 
NC_013169  Ksed_00990  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  49.25 
 
 
201 aa  181  9.000000000000001e-45  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.666199  normal 
 
 
-
 
NC_014210  Ndas_1808  two component transcriptional regulator, LuxR family  49.25 
 
 
201 aa  179  2e-44  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.207018 
 
 
-
 
NC_013739  Cwoe_4753  two component transcriptional regulator, LuxR family  49.5 
 
 
201 aa  177  9e-44  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.226774 
 
 
-
 
NC_008578  Acel_0195  two component LuxR family transcriptional regulator  51.24 
 
 
205 aa  172  1.9999999999999998e-42  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.116105 
 
 
-
 
NC_012669  Bcav_0588  two component transcriptional regulator, LuxR family  49.5 
 
 
204 aa  173  1.9999999999999998e-42  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal 
 
 
-
 
NC_011772  BCG9842_B5477  DNA-binding response regulator  42.5 
 
 
200 aa  172  3.9999999999999995e-42  Bacillus cereus G9842  Bacteria  hitchhiker  0.00156963  hitchhiker  0.00000000000102018 
 
 
-
 
NC_013947  Snas_2068  two component transcriptional regulator, LuxR family  47.76 
 
 
212 aa  171  5.999999999999999e-42  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.385073  normal  0.894995 
 
 
-
 
NC_011658  BCAH187_A5531  DNA-binding response regulator  41.5 
 
 
200 aa  170  1e-41  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS5200  DNA-binding response regulator  41.5 
 
 
200 aa  169  2e-41  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5597  DNA-binding response regulator  41.5 
 
 
200 aa  169  2e-41  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_3006  two component transcriptional regulator, LuxR family  46 
 
 
204 aa  169  2e-41  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.000248543  hitchhiker  0.000146029 
 
 
-
 
NC_003909  BCE_5482  DNA-binding response regulator  41 
 
 
200 aa  169  3e-41  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5150  two component LuxR family transcriptional regulator  41.5 
 
 
200 aa  168  5e-41  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_5034  DNA-binding response regulator  41.5 
 
 
200 aa  168  5e-41  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.617082  n/a   
 
 
-
 
NC_011773  BCAH820_5444  DNA-binding response regulator  41.5 
 
 
200 aa  168  5e-41  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_011725  BCB4264_A5475  DNA-binding response regulator  41.5 
 
 
200 aa  168  6e-41  Bacillus cereus B4264  Bacteria  normal  0.132453  n/a   
 
 
-
 
NC_013757  Gobs_1641  two component transcriptional regulator, LuxR family  48.5 
 
 
201 aa  167  8e-41  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK5050  DNA-binding response regulator  41 
 
 
200 aa  167  1e-40  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_012803  Mlut_16250  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  48 
 
 
224 aa  166  2e-40  Micrococcus luteus NCTC 2665  Bacteria  normal  0.216822  n/a   
 
 
-
 
NC_013510  Tcur_2770  two component transcriptional regulator, LuxR family  43.5 
 
 
201 aa  163  1.0000000000000001e-39  Thermomonospora curvata DSM 43183  Bacteria  normal  0.282039  n/a   
 
 
-
 
NC_013757  Gobs_4836  two component transcriptional regulator, LuxR family  50 
 
 
201 aa  163  1.0000000000000001e-39  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.16538  n/a   
 
 
-
 
NC_011071  Smal_0258  two component transcriptional regulator, LuxR family  46.5 
 
 
200 aa  163  1.0000000000000001e-39  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_0655  two component transcriptional regulator, LuxR family  44.5 
 
 
200 aa  163  2.0000000000000002e-39  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_8146  response regulator receiver protein  47.26 
 
 
202 aa  162  4.0000000000000004e-39  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.524184 
 
 
-
 
NC_013131  Caci_0763  two component transcriptional regulator, LuxR family  46.5 
 
 
208 aa  162  5.0000000000000005e-39  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.313515 
 
 
-
 
NC_013595  Sros_4055  response regulator receiver protein  46 
 
 
201 aa  161  5.0000000000000005e-39  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0367887 
 
 
-
 
NC_014165  Tbis_1720  LuxR family two component transcriptional regulator  49.25 
 
 
201 aa  160  8.000000000000001e-39  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_008025  Dgeo_0183  two component LuxR family transcriptional regulator  50.5 
 
 
200 aa  160  1e-38  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.541303  normal  0.654013 
 
 
-
 
NC_013595  Sros_0091  response regulator receiver protein  46.77 
 
 
204 aa  160  2e-38  Streptosporangium roseum DSM 43021  Bacteria  normal  0.520551  normal 
 
 
-
 
NC_013595  Sros_6441  response regulator receiver protein  45.5 
 
 
227 aa  159  3e-38  Streptosporangium roseum DSM 43021  Bacteria  normal  0.176234  normal  0.0893652 
 
 
-
 
NC_013093  Amir_1937  two component transcriptional regulator, LuxR family  45 
 
 
201 aa  158  5e-38  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_4572  two component transcriptional regulator, LuxR family  46 
 
 
200 aa  155  3e-37  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.318618  normal  0.115695 
 
 
-
 
NC_013131  Caci_3654  two component transcriptional regulator, LuxR family  48.26 
 
 
201 aa  155  3e-37  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0345388 
 
 
-
 
NC_009092  Shew_3506  two component LuxR family transcriptional regulator  41 
 
 
198 aa  153  2e-36  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_02200  two component transcriptional regulator, LuxR family  44 
 
 
208 aa  153  2e-36  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_007912  Sde_3820  two component LuxR family transcriptional regulator  41.46 
 
 
205 aa  152  2.9999999999999998e-36  Saccharophagus degradans 2-40  Bacteria  normal  0.113202  normal 
 
 
-
 
NC_013595  Sros_4598  response regulator receiver protein  46 
 
 
201 aa  148  7e-35  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.053163 
 
 
-
 
NC_011365  Gdia_1908  two component transcriptional regulator, LuxR family  42 
 
 
201 aa  146  2.0000000000000003e-34  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal  0.264232 
 
 
-
 
NC_010506  Swoo_4591  two component LuxR family transcriptional regulator  38.5 
 
 
198 aa  145  3e-34  Shewanella woodyi ATCC 51908  Bacteria  normal  unclonable  0.00000001788 
 
 
-
 
NC_013946  Mrub_1264  two component LuxR family transcriptional regulator  45 
 
 
200 aa  142  4e-33  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.86401 
 
 
-
 
NC_011138  MADE_03365  DNA-binding response regulator, LuxR family protein  37.19 
 
 
205 aa  139  3.9999999999999997e-32  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_0691  two component transcriptional regulator, LuxR family  44.74 
 
 
190 aa  137  7.999999999999999e-32  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008347  Mmar10_2543  two component LuxR family transcriptional regulator  42 
 
 
202 aa  135  3.0000000000000003e-31  Maricaulis maris MCS10  Bacteria  normal  0.446643  normal 
 
 
-
 
NC_008345  Sfri_0357  two component transcriptional regulator, LuxR family protein  37.75 
 
 
202 aa  135  5e-31  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_1383  two component LuxR family transcriptional regulator  34.34 
 
 
200 aa  130  1.0000000000000001e-29  Staphylococcus aureus subsp. aureus JH9  Bacteria  hitchhiker  0.00000320378  n/a   
 
 
-
 
NC_009632  SaurJH1_1410  response regulator receiver  34.34 
 
 
200 aa  130  1.0000000000000001e-29  Staphylococcus aureus subsp. aureus JH1  Bacteria  hitchhiker  0.000440417  n/a   
 
 
-
 
NC_002976  SERP0889  LuxR family DNA-binding response regulator  32.5 
 
 
200 aa  128  4.0000000000000003e-29  Staphylococcus epidermidis RP62A  Bacteria  hitchhiker  0.0000916195  n/a   
 
 
-
 
NC_008532  STER_1290  DNA-binding response regulator  36.5 
 
 
200 aa  126  2.0000000000000002e-28  Streptococcus thermophilus LMD-9  Bacteria  normal  0.29796  n/a   
 
 
-
 
NC_009052  Sbal_0347  two component LuxR family transcriptional regulator  39.5 
 
 
198 aa  127  2.0000000000000002e-28  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_0345  two component LuxR family transcriptional regulator  39.5 
 
 
198 aa  127  2.0000000000000002e-28  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_0352  two component LuxR family transcriptional regulator  39.5 
 
 
198 aa  125  3e-28  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_007412  Ava_C0116  two component LuxR family transcriptional regulator  34.16 
 
 
209 aa  125  5e-28  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_2533  response regulator receiver protein  38.03 
 
 
220 aa  124  6e-28  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.495874 
 
 
-
 
NC_011663  Sbal223_0355  two component transcriptional regulator, LuxR family  39 
 
 
198 aa  124  7e-28  Shewanella baltica OS223  Bacteria  normal  0.881439  hitchhiker  0.0000000668977 
 
 
-
 
NC_004347  SO_0351  LuxR family DNA-binding response regulator  39.5 
 
 
198 aa  124  9e-28  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_013235  Namu_2610  two component transcriptional regulator, LuxR family  50.34 
 
 
144 aa  124  1e-27  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00000438854  normal  0.0112001 
 
 
-
 
NC_013947  Snas_2469  two component transcriptional regulator, LuxR family  39.15 
 
 
214 aa  123  2e-27  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.126163  normal 
 
 
-
 
NC_014210  Ndas_4254  two component transcriptional regulator, LuxR family  37.96 
 
 
225 aa  122  4e-27  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.867992  normal  0.287586 
 
 
-
 
NC_007954  Sden_3475  response regulator receiver  37.8 
 
 
207 aa  122  4e-27  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_3621  two component LuxR family transcriptional regulator  38.5 
 
 
198 aa  121  6e-27  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_3818  two component LuxR family transcriptional regulator  38.5 
 
 
198 aa  121  6e-27  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_010571  Oter_3372  two component LuxR family transcriptional regulator  37.81 
 
 
212 aa  121  6e-27  Opitutus terrae PB90-1  Bacteria  normal  normal  0.383896 
 
 
-
 
NC_008322  Shewmr7_0322  two component LuxR family transcriptional regulator  38.5 
 
 
198 aa  121  8e-27  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_3614  two component transcriptional regulator, LuxR family  42.79 
 
 
201 aa  119  3.9999999999999996e-26  Thermomonospora curvata DSM 43183  Bacteria  normal  0.765091  n/a   
 
 
-
 
NC_008148  Rxyl_1550  two component LuxR family transcriptional regulator  35.05 
 
 
220 aa  119  3.9999999999999996e-26  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_6161  response regulator receiver protein  36.32 
 
 
221 aa  118  6e-26  Streptosporangium roseum DSM 43021  Bacteria  normal  0.902987  decreased coverage  0.000109123 
 
 
-
 
NC_013595  Sros_7316  response regulator receiver protein  40.8 
 
 
201 aa  118  6e-26  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_011898  Ccel_1863  two component transcriptional regulator, LuxR family  31.9 
 
 
216 aa  117  9e-26  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00000548978  n/a   
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  32.86 
 
 
216 aa  117  9.999999999999999e-26  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_0806  two component LuxR family transcriptional regulator  32.21 
 
 
216 aa  116  1.9999999999999998e-25  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  35.19 
 
 
225 aa  116  1.9999999999999998e-25  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_010001  Cphy_3936  two component LuxR family transcriptional regulator  28.85 
 
 
213 aa  115  3.9999999999999997e-25  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00507176  n/a   
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  34.42 
 
 
218 aa  114  7.999999999999999e-25  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_0601  two component transcriptional regulator, LuxR family  34.27 
 
 
215 aa  113  2.0000000000000002e-24  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_0730  two component LuxR family transcriptional regulator  36.71 
 
 
214 aa  112  3e-24  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.47186  normal 
 
 
-
 
NC_013947  Snas_3359  two component transcriptional regulator, LuxR family  35.21 
 
 
219 aa  112  3e-24  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0172663  normal 
 
 
-
 
NC_007963  Csal_2132  two component LuxR family transcriptional regulator  32.85 
 
 
214 aa  112  4.0000000000000004e-24  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.0449794  n/a   
 
 
-
 
NC_011830  Dhaf_1230  two component transcriptional regulator, LuxR family  32.86 
 
 
215 aa  112  4.0000000000000004e-24  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_2573  two component transcriptional regulator, LuxR family  34.43 
 
 
221 aa  112  4.0000000000000004e-24  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.0970392  n/a   
 
 
-
 
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