More than 300 homologs were found in PanDaTox collection
for query gene Smed_2175 on replicon NC_009636
Organism: Sinorhizobium medicae WSM419



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012854  Rleg_6429  Butyryl-CoA dehydrogenase  81.87 
 
 
386 aa  665    Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.121067 
 
 
-
 
NC_009636  Smed_2175  acyl-CoA dehydrogenase domain-containing protein  100 
 
 
386 aa  796    Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_011368  Rleg2_4494  acyl-CoA dehydrogenase domain protein  82.9 
 
 
386 aa  676    Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.211283  normal 
 
 
-
 
NC_007802  Jann_3822  acyl-CoA dehydrogenase-like  75.65 
 
 
386 aa  611  9.999999999999999e-175  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_008044  TM1040_2796  butyryl-CoA dehydrogenase  64.51 
 
 
399 aa  520  1e-146  Ruegeria sp. TM1040  Bacteria  normal  normal  0.262809 
 
 
-
 
NC_002947  PP_3725  acyl-CoA dehydrogenase domain-containing protein  54.95 
 
 
386 aa  438  9.999999999999999e-123  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_5712  putative acyl-CoA dehydrogenase  55.21 
 
 
386 aa  440  9.999999999999999e-123  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_2038  acyl-CoA dehydrogenase domain-containing protein  54.95 
 
 
386 aa  438  9.999999999999999e-123  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_65820  putative acyl-CoA dehydrogenase  54.95 
 
 
386 aa  439  9.999999999999999e-123  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_2181  acyl-CoA dehydrogenase domain-containing protein  54.95 
 
 
386 aa  438  9.999999999999999e-123  Pseudomonas putida GB-1  Bacteria  normal  0.326272  normal 
 
 
-
 
NC_008781  Pnap_2701  acyl-CoA dehydrogenase domain-containing protein  41.15 
 
 
386 aa  295  1e-78  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.47386  normal 
 
 
-
 
NC_010524  Lcho_1213  acyl-CoA dehydrogenase domain-containing protein  41.67 
 
 
386 aa  291  9e-78  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_011725  BCB4264_A5464  acyl-CoA dehydrogenase  41.39 
 
 
379 aa  291  1e-77  Bacillus cereus B4264  Bacteria  unclonable  0.0000608426  n/a   
 
 
-
 
NC_011772  BCG9842_B5488  acyl-CoA dehydrogenase  41.13 
 
 
379 aa  291  1e-77  Bacillus cereus G9842  Bacteria  normal  0.270181  hitchhiker  1.62736e-22 
 
 
-
 
NC_013411  GYMC61_2494  Butyryl-CoA dehydrogenase  42.09 
 
 
392 aa  290  3e-77  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011658  BCAH187_A5519  acyl-CoA dehydrogenase  40.87 
 
 
379 aa  287  2e-76  Bacillus cereus AH187  Bacteria  normal  0.814074  n/a   
 
 
-
 
NC_011773  BCAH820_5434  acyl-CoA dehydrogenase  40.62 
 
 
379 aa  286  2.9999999999999996e-76  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.0000000000000286159 
 
 
-
 
NC_005945  BAS5190  acyl-CoA dehydrogenase  40.62 
 
 
379 aa  286  4e-76  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5586  acyl-CoA dehydrogenase  40.62 
 
 
379 aa  286  4e-76  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_5025  butyryl-CoA dehydrogenase (short-chain acyl-CoA dehydrogenase)  40.62 
 
 
379 aa  286  5.999999999999999e-76  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_5472  acyl-CoA dehydrogenase  40.62 
 
 
379 aa  285  7e-76  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_3863  acyl-CoA dehydrogenase domain-containing protein  40.78 
 
 
376 aa  285  7e-76  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK5041  acyl-CoA dehydrogenase  40.36 
 
 
379 aa  285  1.0000000000000001e-75  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5139  acyl-CoA dehydrogenase domain-containing protein  40.36 
 
 
379 aa  282  8.000000000000001e-75  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_3341  acyl-CoA dehydrogenase domain protein  41.12 
 
 
379 aa  280  2e-74  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_2439  acyl-CoA dehydrogenase domain protein  41.19 
 
 
380 aa  281  2e-74  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013440  Hoch_3778  acyl-CoA dehydrogenase domain protein  39.28 
 
 
382 aa  280  2e-74  Haliangium ochraceum DSM 14365  Bacteria  normal  0.341587  normal  0.271407 
 
 
-
 
NC_009441  Fjoh_1932  acyl-CoA dehydrogenase domain-containing protein  39.28 
 
 
380 aa  280  2e-74  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_1843  acyl-CoA dehydrogenase domain protein  41.19 
 
 
380 aa  281  2e-74  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_3450  acyl-CoA dehydrogenase domain protein  41.43 
 
 
380 aa  279  7e-74  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009674  Bcer98_3862  acyl-CoA dehydrogenase domain-containing protein  40.36 
 
 
379 aa  276  4e-73  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_1288  acyl-CoA dehydrogenase domain protein  39.02 
 
 
379 aa  275  7e-73  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.751821 
 
 
-
 
NC_009767  Rcas_1109  acyl-CoA dehydrogenase domain-containing protein  38.72 
 
 
388 aa  275  7e-73  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.168915  normal 
 
 
-
 
NC_011658  BCAH187_A5520  acyl-CoA dehydrogenase  39.48 
 
 
381 aa  274  1.0000000000000001e-72  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_5473  acyl-CoA dehydrogenase  39.48 
 
 
376 aa  274  2.0000000000000002e-72  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_5026  short-chain acyl-CoA dehydrogenase; butyryl-CoA dehydrogenase  39.22 
 
 
376 aa  273  3e-72  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_1802  acyl-CoA dehydrogenase domain-containing protein  40.16 
 
 
381 aa  273  3e-72  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_5435  acyl-CoA dehydrogenase  39.22 
 
 
376 aa  273  3e-72  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.000000000529924 
 
 
-
 
NC_011725  BCB4264_A5465  acyl-CoA dehydrogenase  39.22 
 
 
381 aa  273  4.0000000000000004e-72  Bacillus cereus B4264  Bacteria  hitchhiker  0.000680329  n/a   
 
 
-
 
NC_013061  Phep_0837  acyl-CoA dehydrogenase domain protein  38.34 
 
 
390 aa  273  4.0000000000000004e-72  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_3775  acyl-CoA dehydrogenase domain-containing protein  38.21 
 
 
388 aa  273  5.000000000000001e-72  Roseiflexus sp. RS-1  Bacteria  normal  0.0119178  unclonable  0.00000752707 
 
 
-
 
NC_013922  Nmag_3415  acyl-CoA dehydrogenase domain protein  37.89 
 
 
414 aa  272  6e-72  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_006274  BCZK5042  short-chain acyl-CoA dehydrogenase; butyryl-CoA dehydrogenase  39.22 
 
 
376 aa  272  7e-72  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_1999  acyl-CoA dehydrogenase  39.54 
 
 
391 aa  272  7e-72  Thermobifida fusca YX  Bacteria  normal  0.0248728  n/a   
 
 
-
 
NC_010184  BcerKBAB4_2355  acyl-CoA dehydrogenase domain-containing protein  40.16 
 
 
381 aa  272  8.000000000000001e-72  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.774843  n/a   
 
 
-
 
NC_013205  Aaci_2056  acyl-CoA dehydrogenase domain protein  40 
 
 
377 aa  272  9e-72  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.232194  n/a   
 
 
-
 
NC_003909  BCE_2548  acyl-CoA dehydrogenase  39.9 
 
 
381 aa  271  1e-71  Bacillus cereus ATCC 10987  Bacteria  normal  0.438014  n/a   
 
 
-
 
NC_011725  BCB4264_A2511  acyl-CoA dehydrogenase  39.9 
 
 
381 aa  271  1e-71  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK2285  acyl-CoA dehydrogenase  39.9 
 
 
381 aa  271  1e-71  Bacillus cereus E33L  Bacteria  normal  0.769883  n/a   
 
 
-
 
NC_013159  Svir_33210  acyl-CoA dehydrogenase  39.18 
 
 
389 aa  271  1e-71  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.243663  normal  0.754036 
 
 
-
 
NC_011658  BCAH187_A2603  acyl-CoA dehydrogenase  39.9 
 
 
381 aa  271  1e-71  Bacillus cereus AH187  Bacteria  normal  0.608519  n/a   
 
 
-
 
NC_011772  BCG9842_B2812  acyl-CoA dehydrogenase  39.9 
 
 
381 aa  271  1e-71  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.000163693 
 
 
-
 
NC_013093  Amir_1569  acyl-CoA dehydrogenase domain protein  41.43 
 
 
389 aa  271  2e-71  Actinosynnema mirum DSM 43827  Bacteria  normal  0.881248  n/a   
 
 
-
 
NC_005945  BAS2369  acyl-CoA dehydrogenase  39.9 
 
 
381 aa  271  2e-71  Bacillus anthracis str. Sterne  Bacteria  normal  0.73982  n/a   
 
 
-
 
NC_013743  Htur_2326  acyl-CoA dehydrogenase domain protein  38.65 
 
 
398 aa  270  2e-71  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_009253  Dred_0402  acyl-CoA dehydrogenase domain-containing protein  37.34 
 
 
380 aa  271  2e-71  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_1118  acyl-CoA dehydrogenase domain protein  40.66 
 
 
391 aa  270  2.9999999999999997e-71  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.549204 
 
 
-
 
NC_005945  BAS5191  acyl-CoA dehydrogenase  38.96 
 
 
376 aa  270  4e-71  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5587  acyl-CoA dehydrogenase  38.96 
 
 
376 aa  270  4e-71  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_2547  acyl-CoA dehydrogenase  39.64 
 
 
381 aa  269  5.9999999999999995e-71  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_2369  acyl-CoA dehydrogenase-like  38.92 
 
 
380 aa  269  5.9999999999999995e-71  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_011772  BCG9842_B5487  acyl-CoA dehydrogenase  38.7 
 
 
381 aa  269  5.9999999999999995e-71  Bacillus cereus G9842  Bacteria  normal  0.0302943  hitchhiker  1.44799e-22 
 
 
-
 
NC_011831  Cagg_0397  acyl-CoA dehydrogenase domain protein  39.53 
 
 
379 aa  268  8.999999999999999e-71  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.362138 
 
 
-
 
NC_013162  Coch_0730  acyl-CoA dehydrogenase domain protein  39.48 
 
 
381 aa  268  1e-70  Capnocytophaga ochracea DSM 7271  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5140  acyl-CoA dehydrogenase domain-containing protein  38.96 
 
 
376 aa  268  1e-70  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_2327  acyl-CoA dehydrogenase  39.64 
 
 
381 aa  268  2e-70  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_0733  acyl-CoA dehydrogenase domain protein  38.85 
 
 
377 aa  267  2e-70  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_2560  acyl-CoA dehydrogenase  39.64 
 
 
381 aa  268  2e-70  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  4.1486499999999994e-20 
 
 
-
 
NC_009972  Haur_4391  acyl-CoA dehydrogenase domain-containing protein  37.31 
 
 
386 aa  266  4e-70  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_3342  acyl-CoA dehydrogenase domain protein  39.18 
 
 
379 aa  266  5.999999999999999e-70  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B3825  butyryl-CoA dehydrogenase  37.34 
 
 
400 aa  266  5.999999999999999e-70  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_1881  butyryl-CoA dehydrogenase  36.95 
 
 
379 aa  265  1e-69  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.593492  normal  0.222475 
 
 
-
 
NC_013739  Cwoe_0410  acyl-CoA dehydrogenase domain protein  40.87 
 
 
389 aa  264  2e-69  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.436291 
 
 
-
 
NC_007974  Rmet_4427  Butyryl-CoA dehydrogenase  37.34 
 
 
388 aa  264  2e-69  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.0000160956  normal  0.322206 
 
 
-
 
NC_011831  Cagg_2382  acyl-CoA dehydrogenase domain protein  37.44 
 
 
389 aa  263  3e-69  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_008025  Dgeo_0736  acyl-CoA dehydrogenase-like protein  37.56 
 
 
379 aa  263  4e-69  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.763418 
 
 
-
 
NC_011830  Dhaf_2695  acyl-CoA dehydrogenase domain protein  36.01 
 
 
382 aa  262  6e-69  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_0124  acyl-CoA dehydrogenase domain protein  39.9 
 
 
376 aa  262  8e-69  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_008025  Dgeo_1179  acyl-CoA dehydrogenase-like protein  38.11 
 
 
392 aa  261  2e-68  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_3931  acyl-CoA dehydrogenase domain-containing protein  36.46 
 
 
400 aa  260  2e-68  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.543045 
 
 
-
 
NC_008701  Pisl_1436  butyryl-CoA dehydrogenase  38.05 
 
 
410 aa  261  2e-68  Pyrobaculum islandicum DSM 4184  Archaea  normal  0.170652  hitchhiker  0.00553945 
 
 
-
 
NC_009523  RoseRS_4146  acyl-CoA dehydrogenase domain-containing protein  37.98 
 
 
394 aa  260  3e-68  Roseiflexus sp. RS-1  Bacteria  normal  0.954368  normal 
 
 
-
 
NC_012856  Rpic12D_0132  acyl-CoA dehydrogenase domain protein  39.9 
 
 
376 aa  260  3e-68  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_5985  acyl-CoA dehydrogenase domain-containing protein  37.8 
 
 
376 aa  260  3e-68  Delftia acidovorans SPH-1  Bacteria  normal  hitchhiker  0.00997774 
 
 
-
 
NC_009767  Rcas_0583  acyl-CoA dehydrogenase domain-containing protein  38.5 
 
 
379 aa  259  4e-68  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.394739 
 
 
-
 
NC_013171  Apre_1356  acyl-CoA dehydrogenase domain protein  37.66 
 
 
379 aa  259  5.0000000000000005e-68  Anaerococcus prevotii DSM 20548  Bacteria  unclonable  0.00000000100384  n/a   
 
 
-
 
NC_013730  Slin_3527  acyl-CoA dehydrogenase domain protein  38.34 
 
 
386 aa  259  5.0000000000000005e-68  Spirosoma linguale DSM 74  Bacteria  normal  0.496474  normal 
 
 
-
 
NC_010501  PputW619_3455  acyl-CoA dehydrogenase domain-containing protein  37.8 
 
 
375 aa  258  9e-68  Pseudomonas putida W619  Bacteria  normal  normal  0.129524 
 
 
-
 
NC_007348  Reut_B4150  butyryl-CoA dehydrogenase  36.32 
 
 
388 aa  257  2e-67  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009073  Pcal_0838  butyryl-CoA dehydrogenase  37.53 
 
 
410 aa  257  2e-67  Pyrobaculum calidifontis JCM 11548  Archaea  n/a    normal 
 
 
-
 
NC_009718  Fnod_0585  acyl-CoA dehydrogenase domain-containing protein  35.66 
 
 
379 aa  257  2e-67  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_013202  Hmuk_2909  acyl-CoA dehydrogenase domain protein  39.2 
 
 
389 aa  257  2e-67  Halomicrobium mukohataei DSM 12286  Archaea  normal  0.214496  normal 
 
 
-
 
NC_009253  Dred_1782  butyryl-CoA dehydrogenase  36.95 
 
 
379 aa  257  2e-67  Desulfotomaculum reducens MI-1  Bacteria  normal  0.257154  n/a   
 
 
-
 
NC_009675  Anae109_2163  acyl-CoA dehydrogenase domain-containing protein  39.53 
 
 
389 aa  257  3e-67  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.820192  normal  0.287496 
 
 
-
 
NC_009512  Pput_2279  acyl-CoA dehydrogenase domain-containing protein  37.5 
 
 
383 aa  257  3e-67  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_009376  Pars_0456  butyryl-CoA dehydrogenase  37.53 
 
 
410 aa  257  3e-67  Pyrobaculum arsenaticum DSM 13514  Archaea  normal  0.820933  normal 
 
 
-
 
NC_013922  Nmag_2307  acyl-CoA dehydrogenase domain protein  40.31 
 
 
381 aa  256  4e-67  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_013743  Htur_0919  acyl-CoA dehydrogenase domain protein  37.56 
 
 
383 aa  256  4e-67  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_008782  Ajs_3774  acyl-CoA dehydrogenase domain-containing protein  37.8 
 
 
376 aa  256  5e-67  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_3492  acyl-CoA dehydrogenase domain-containing protein  38.02 
 
 
383 aa  256  6e-67  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
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