8 homologs were found in PanDaTox collection
for query gene Smed_1863 on replicon NC_009636
Organism: Sinorhizobium medicae WSM419



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009636  Smed_1863  necrosis-inducing protein  100 
 
 
245 aa  512  1e-144  Sinorhizobium medicae WSM419  Bacteria  decreased coverage  0.00488772  normal  0.370608 
 
 
-
 
NC_009636  Smed_1633  necrosis-inducing protein  53.97 
 
 
238 aa  253  2.0000000000000002e-66  Sinorhizobium medicae WSM419  Bacteria  normal  0.0500938  normal  0.10689 
 
 
-
 
BN001306  ANIA_03211  NPP1 domain protein, putative (AFU_orthologue; AFUA_5G00600)  43.89 
 
 
247 aa  157  1e-37  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.138063  normal  0.092001 
 
 
-
 
NC_009921  Franean1_0714  necrosis-inducing protein  33.18 
 
 
272 aa  99  6e-20  Frankia sp. EAN1pec  Bacteria  normal  0.506462  normal  0.488676 
 
 
-
 
NC_013947  Snas_1789  Necrosis inducing  29.7 
 
 
690 aa  72  0.000000000008  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_1433  Necrosis inducing  27.14 
 
 
263 aa  60.8  0.00000002  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1333  Necrosis inducing  25.63 
 
 
263 aa  55.1  0.000001  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_2838  Necrosis inducing protein  24.87 
 
 
263 aa  52  0.000009  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
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