More than 300 homologs were found in PanDaTox collection
for query gene Smed_0300 on replicon NC_009636
Organism: Sinorhizobium medicae WSM419



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_004311  BRA0778  glucose-6-phosphate 1-dehydrogenase  74.95 
 
 
491 aa  793    Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_0363  glucose-6-phosphate 1-dehydrogenase  85.13 
 
 
491 aa  891    Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.146846 
 
 
-
 
NC_009504  BOV_A0728  glucose-6-phosphate 1-dehydrogenase  75.15 
 
 
491 aa  794    Brucella ovis ATCC 25840  Bacteria  normal  0.833779  n/a   
 
 
-
 
NC_011989  Avi_0798  glucose-6-phosphate 1-dehydrogenase  80.57 
 
 
489 aa  822    Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009668  Oant_3956  glucose-6-phosphate 1-dehydrogenase  75.15 
 
 
491 aa  801    Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_1017  glucose-6-phosphate 1-dehydrogenase  65.16 
 
 
491 aa  677    Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_1252  glucose-6-phosphate 1-dehydrogenase  66.87 
 
 
491 aa  698    Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.588291 
 
 
-
 
NC_008254  Meso_0159  glucose-6-phosphate 1-dehydrogenase  71.89 
 
 
490 aa  739    Chelativorans sp. BNC1  Bacteria  normal  0.580754  n/a   
 
 
-
 
NC_010581  Bind_2867  glucose-6-phosphate 1-dehydrogenase  63.67 
 
 
492 aa  656    Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_0300  glucose-6-phosphate 1-dehydrogenase  100 
 
 
491 aa  1013    Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_0395  glucose-6-phosphate 1-dehydrogenase  84.93 
 
 
491 aa  890    Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.329299  normal  0.142992 
 
 
-
 
NC_011757  Mchl_0480  glucose-6-phosphate 1-dehydrogenase  60.61 
 
 
492 aa  616  1e-175  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_0516  glucose-6-phosphate 1-dehydrogenase  60.41 
 
 
492 aa  617  1e-175  Methylobacterium populi BJ001  Bacteria  normal  normal  0.455459 
 
 
-
 
NC_010172  Mext_0545  glucose-6-phosphate 1-dehydrogenase  60.61 
 
 
535 aa  615  1e-175  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_1125  glucose-6-phosphate 1-dehydrogenase  58.32 
 
 
490 aa  600  1e-170  Methylocella silvestris BL2  Bacteria  n/a    normal  0.104301 
 
 
-
 
NC_009484  Acry_0465  glucose-6-phosphate 1-dehydrogenase  57.64 
 
 
499 aa  589  1e-167  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_1704  glucose-6-phosphate 1-dehydrogenase  58.08 
 
 
505 aa  586  1e-166  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_3905  glucose-6-phosphate 1-dehydrogenase  57.87 
 
 
490 aa  586  1e-166  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.737709 
 
 
-
 
NC_010511  M446_4822  glucose-6-phosphate 1-dehydrogenase  57.67 
 
 
493 aa  587  1e-166  Methylobacterium sp. 4-46  Bacteria  normal  0.712269  normal  0.0207356 
 
 
-
 
NC_008347  Mmar10_2642  glucose-6-phosphate 1-dehydrogenase  57.14 
 
 
491 aa  578  1e-164  Maricaulis maris MCS10  Bacteria  normal  normal 
 
 
-
 
NC_009952  Dshi_1684  glucose-6-phosphate 1-dehydrogenase  55.89 
 
 
484 aa  565  1e-160  Dinoroseobacter shibae DFL 12  Bacteria  hitchhiker  0.000794999  normal  0.0834602 
 
 
-
 
NC_014158  Tpau_4207  glucose-6-phosphate 1-dehydrogenase  55.99 
 
 
492 aa  565  1e-160  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_7022  glucose-6-phosphate 1-dehydrogenase  55.74 
 
 
514 aa  561  1.0000000000000001e-159  Frankia sp. EAN1pec  Bacteria  normal  0.533798  normal 
 
 
-
 
NC_009921  Franean1_7068  glucose-6-phosphate 1-dehydrogenase  55.74 
 
 
492 aa  562  1.0000000000000001e-159  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_1969  glucose-6-phosphate 1-dehydrogenase  55.08 
 
 
481 aa  559  1e-158  Jannaschia sp. CCS1  Bacteria  normal  0.906844  normal  0.668696 
 
 
-
 
NC_013440  Hoch_4431  glucose-6-phosphate 1-dehydrogenase  55.86 
 
 
487 aa  548  1e-155  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_008686  Pden_1952  glucose-6-phosphate 1-dehydrogenase  54.88 
 
 
500 aa  547  1e-154  Paracoccus denitrificans PD1222  Bacteria  normal  0.139543  normal  0.0234698 
 
 
-
 
NC_009654  Mmwyl1_1038  glucose-6-phosphate 1-dehydrogenase  56.73 
 
 
491 aa  540  9.999999999999999e-153  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009428  Rsph17025_1778  glucose-6-phosphate 1-dehydrogenase  53.66 
 
 
483 aa  536  1e-151  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_008044  TM1040_0377  glucose-6-phosphate 1-dehydrogenase  53.99 
 
 
483 aa  536  1e-151  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_007493  RSP_2734  glucose-6-phosphate 1-dehydrogenase  53.46 
 
 
483 aa  533  1e-150  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.470312  n/a   
 
 
-
 
NC_009049  Rsph17029_1392  glucose-6-phosphate 1-dehydrogenase  53.46 
 
 
483 aa  533  1e-150  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.174717  normal 
 
 
-
 
NC_013595  Sros_3374  Glucose-6-phosphate dehydrogenase  53.61 
 
 
491 aa  522  1e-147  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.00871794  normal  0.419833 
 
 
-
 
NC_014210  Ndas_4742  glucose-6-phosphate 1-dehydrogenase  53.14 
 
 
492 aa  520  1e-146  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_011365  Gdia_3183  glucose-6-phosphate 1-dehydrogenase  51.32 
 
 
492 aa  518  1.0000000000000001e-145  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.896355  normal 
 
 
-
 
NC_012560  Avin_02020  glucose-6-phosphate 1-dehydrogenase  52.77 
 
 
485 aa  517  1.0000000000000001e-145  Azotobacter vinelandii DJ  Bacteria  normal  0.641659  n/a   
 
 
-
 
NC_007794  Saro_1893  glucose-6-phosphate 1-dehydrogenase  54.49 
 
 
482 aa  516  1.0000000000000001e-145  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.674127  n/a   
 
 
-
 
NC_008048  Sala_0190  glucose-6-phosphate 1-dehydrogenase  52.08 
 
 
512 aa  512  1e-144  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_2887  glucose-6-phosphate 1-dehydrogenase  53.86 
 
 
485 aa  510  1e-143  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.375097 
 
 
-
 
NC_009511  Swit_1623  glucose-6-phosphate 1-dehydrogenase  53.86 
 
 
485 aa  510  1e-143  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_4486  glucose-6-phosphate 1-dehydrogenase  53.28 
 
 
499 aa  511  1e-143  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_5400  glucose-6-phosphate 1-dehydrogenase  53.64 
 
 
480 aa  506  9.999999999999999e-143  Pseudomonas putida GB-1  Bacteria  normal  0.887307  normal  0.016142 
 
 
-
 
NC_010501  PputW619_5128  glucose-6-phosphate 1-dehydrogenase  53.64 
 
 
480 aa  507  9.999999999999999e-143  Pseudomonas putida W619  Bacteria  normal  normal  0.206455 
 
 
-
 
NC_002947  PP_5351  glucose-6-phosphate 1-dehydrogenase  53.22 
 
 
485 aa  503  1e-141  Pseudomonas putida KT2440  Bacteria  normal  0.317801  normal  0.031932 
 
 
-
 
NC_004347  SO_2489  glucose-6-phosphate 1-dehydrogenase  50.73 
 
 
490 aa  502  1e-141  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009092  Shew_2048  glucose-6-phosphate 1-dehydrogenase  51.04 
 
 
490 aa  504  1e-141  Shewanella loihica PV-4  Bacteria  decreased coverage  0.0000103932  normal  0.421774 
 
 
-
 
NC_009512  Pput_5259  glucose-6-phosphate 1-dehydrogenase  53.22 
 
 
480 aa  503  1e-141  Pseudomonas putida F1  Bacteria  normal  normal  0.559368 
 
 
-
 
NC_008700  Sama_1812  glucose-6-phosphate 1-dehydrogenase  50.94 
 
 
490 aa  502  1e-141  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.0000273769  normal 
 
 
-
 
NC_009831  Ssed_2070  glucose-6-phosphate 1-dehydrogenase  49.59 
 
 
490 aa  499  1e-140  Shewanella sediminis HAW-EB3  Bacteria  hitchhiker  0.0000903154  hitchhiker  0.000676644 
 
 
-
 
NC_009656  PSPA7_6228  glucose-6-phosphate 1-dehydrogenase  53.27 
 
 
488 aa  500  1e-140  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_2079  glucose-6-phosphate 1-dehydrogenase  49.39 
 
 
490 aa  499  1e-140  Shewanella denitrificans OS217  Bacteria  normal  0.0300495  n/a   
 
 
-
 
NC_007963  Csal_2741  glucose-6-phosphate 1-dehydrogenase  52.29 
 
 
491 aa  500  1e-140  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_2046  glucose-6-phosphate 1-dehydrogenase  51.04 
 
 
490 aa  501  1e-140  Shewanella sp. MR-4  Bacteria  normal  0.106062  normal  0.251216 
 
 
-
 
NC_008322  Shewmr7_1929  glucose-6-phosphate 1-dehydrogenase  51.04 
 
 
490 aa  501  1e-140  Shewanella sp. MR-7  Bacteria  normal  0.137713  normal  0.157754 
 
 
-
 
NC_008463  PA14_71800  glucose-6-phosphate 1-dehydrogenase  53.06 
 
 
488 aa  499  1e-140  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_2151  glucose-6-phosphate 1-dehydrogenase  50.83 
 
 
490 aa  500  1e-140  Shewanella sp. ANA-3  Bacteria  normal  0.013826  normal  0.219561 
 
 
-
 
NC_009901  Spea_2335  glucose-6-phosphate 1-dehydrogenase  50.94 
 
 
498 aa  501  1e-140  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B1764  glucose-6-phosphate 1-dehydrogenase  51.96 
 
 
495 aa  496  1e-139  Burkholderia xenovorans LB400  Bacteria  normal  hitchhiker  0.0084165 
 
 
-
 
NC_009438  Sputcn32_1866  glucose-6-phosphate 1-dehydrogenase  50.21 
 
 
490 aa  496  1e-139  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_2539  glucose-6-phosphate 1-dehydrogenase  49.79 
 
 
490 aa  498  1e-139  Shewanella woodyi ATCC 51908  Bacteria  normal  0.169507  normal  0.0535577 
 
 
-
 
NC_008740  Maqu_1834  glucose-6-phosphate 1-dehydrogenase  49.9 
 
 
491 aa  496  1e-139  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_010623  Bphy_3342  glucose-6-phosphate 1-dehydrogenase  50 
 
 
479 aa  492  9.999999999999999e-139  Burkholderia phymatum STM815  Bacteria  normal  normal  0.168884 
 
 
-
 
NC_010676  Bphyt_4908  glucose-6-phosphate 1-dehydrogenase  52.07 
 
 
493 aa  494  9.999999999999999e-139  Burkholderia phytofirmans PsJN  Bacteria  normal  0.20077  normal  0.0510902 
 
 
-
 
NC_009035  Sbal_4527  glucose-6-phosphate 1-dehydrogenase  49.59 
 
 
490 aa  489  1e-137  Shewanella baltica OS155  Bacteria  n/a    n/a   
 
 
-
 
NC_009665  Shew185_2130  glucose-6-phosphate 1-dehydrogenase  49.59 
 
 
490 aa  489  1e-137  Shewanella baltica OS185  Bacteria  decreased coverage  0.00145031  n/a   
 
 
-
 
NC_009052  Sbal_2241  glucose-6-phosphate 1-dehydrogenase  49.59 
 
 
490 aa  489  1e-137  Shewanella baltica OS155  Bacteria  normal  0.232724  n/a   
 
 
-
 
NC_008345  Sfri_1892  glucose-6-phosphate 1-dehydrogenase  49.06 
 
 
489 aa  489  1e-137  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_2254  glucose-6-phosphate 1-dehydrogenase  49.59 
 
 
490 aa  489  1e-137  Shewanella baltica OS223  Bacteria  decreased coverage  0.000217309  hitchhiker  0.0000019456 
 
 
-
 
NC_009997  Sbal195_2175  glucose-6-phosphate 1-dehydrogenase  49.59 
 
 
490 aa  489  1e-137  Shewanella baltica OS195  Bacteria  normal  0.949552  normal  0.0713336 
 
 
-
 
NC_002977  MCA0025  glucose-6-phosphate 1-dehydrogenase  50.51 
 
 
495 aa  487  1e-136  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_2281  glucose-6-phosphate 1-dehydrogenase  50.94 
 
 
489 aa  485  1e-136  Colwellia psychrerythraea 34H  Bacteria  unclonable  0.0036441  n/a   
 
 
-
 
NC_009439  Pmen_3143  glucose-6-phosphate 1-dehydrogenase  50.1 
 
 
488 aa  486  1e-136  Pseudomonas mendocina ymp  Bacteria  normal  0.604017  normal  0.0129943 
 
 
-
 
NC_011138  MADE_01244  glucose-6-phosphate 1-dehydrogenase  50.41 
 
 
497 aa  482  1e-135  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.338325  n/a   
 
 
-
 
NC_007348  Reut_B5329  glucose-6-phosphate 1-dehydrogenase  50.52 
 
 
482 aa  483  1e-135  Ralstonia eutropha JMP134  Bacteria  normal  0.331705  n/a   
 
 
-
 
NC_008228  Patl_0970  glucose-6-phosphate 1-dehydrogenase  49.79 
 
 
496 aa  483  1e-135  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.149525  n/a   
 
 
-
 
NC_008781  Pnap_3694  glucose-6-phosphate 1-dehydrogenase  49.69 
 
 
488 aa  482  1e-135  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_4363  glucose-6-phosphate 1-dehydrogenase  50.1 
 
 
488 aa  481  1e-134  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.623747  normal 
 
 
-
 
NC_007511  Bcep18194_B0242  glucose-6-phosphate 1-dehydrogenase  49.79 
 
 
491 aa  481  1e-134  Burkholderia sp. 383  Bacteria  normal  0.752581  normal 
 
 
-
 
NC_009512  Pput_1060  glucose-6-phosphate 1-dehydrogenase  49.9 
 
 
489 aa  478  1e-133  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_1022  glucose-6-phosphate 1-dehydrogenase  49.48 
 
 
489 aa  475  1e-133  Pseudomonas putida KT2440  Bacteria  normal  0.648443  normal  0.786644 
 
 
-
 
NC_004578  PSPTO_1300  glucose-6-phosphate 1-dehydrogenase  48.56 
 
 
489 aa  476  1e-133  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_1120  glucose-6-phosphate 1-dehydrogenase  48.35 
 
 
489 aa  475  1e-133  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.670667  normal 
 
 
-
 
NC_010501  PputW619_4202  glucose-6-phosphate 1-dehydrogenase  49.07 
 
 
489 aa  475  1e-133  Pseudomonas putida W619  Bacteria  normal  0.779406  normal 
 
 
-
 
NC_010515  Bcenmc03_4863  glucose-6-phosphate 1-dehydrogenase  49.49 
 
 
491 aa  477  1e-133  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.946307  normal 
 
 
-
 
NC_007974  Rmet_5801  glucose-6-phosphate 1-dehydrogenase  49.48 
 
 
496 aa  477  1e-133  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.167036 
 
 
-
 
NC_008061  Bcen_5455  glucose-6-phosphate 1-dehydrogenase  49.49 
 
 
491 aa  477  1e-133  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.625175  n/a   
 
 
-
 
NC_008543  Bcen2424_5407  glucose-6-phosphate 1-dehydrogenase  49.49 
 
 
491 aa  477  1e-133  Burkholderia cenocepacia HI2424  Bacteria  normal  0.294484  hitchhiker  0.0036446 
 
 
-
 
NC_007347  Reut_A1650  glucose-6-phosphate 1-dehydrogenase  49.69 
 
 
493 aa  472  1e-132  Ralstonia eutropha JMP134  Bacteria  normal  0.211495  n/a   
 
 
-
 
NC_010086  Bmul_3354  glucose-6-phosphate 1-dehydrogenase  49.59 
 
 
491 aa  473  1e-132  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.0522041 
 
 
-
 
NC_010552  BamMC406_5293  glucose-6-phosphate 1-dehydrogenase  48.86 
 
 
491 aa  472  1e-132  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.348046 
 
 
-
 
NC_009656  PSPA7_1947  glucose-6-phosphate 1-dehydrogenase  49.69 
 
 
489 aa  473  1e-132  Pseudomonas aeruginosa PA7  Bacteria  normal  0.104252  n/a   
 
 
-
 
NC_012560  Avin_27260  glucose-6-phosphate 1-dehydrogenase  50 
 
 
489 aa  473  1e-132  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_1789  glucose-6-phosphate 1-dehydrogenase  49.17 
 
 
491 aa  470  1.0000000000000001e-131  Escherichia coli DH1  Bacteria  hitchhiker  0.00188919  n/a   
 
 
-
 
NC_011353  ECH74115_2587  glucose-6-phosphate 1-dehydrogenase  49.17 
 
 
491 aa  470  1.0000000000000001e-131  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.0488921  normal  0.947875 
 
 
-
 
NC_010322  PputGB1_1020  glucose-6-phosphate 1-dehydrogenase  48.87 
 
 
489 aa  471  1.0000000000000001e-131  Pseudomonas putida GB-1  Bacteria  normal  0.224171  normal 
 
 
-
 
NC_009800  EcHS_A1944  glucose-6-phosphate 1-dehydrogenase  49.17 
 
 
491 aa  470  1.0000000000000001e-131  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A2040  glucose-6-phosphate 1-dehydrogenase  49.17 
 
 
491 aa  470  1.0000000000000001e-131  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.678302  normal 
 
 
-
 
NC_010658  SbBS512_E2127  glucose-6-phosphate 1-dehydrogenase  49.17 
 
 
491 aa  471  1.0000000000000001e-131  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_011149  SeAg_B1238  glucose-6-phosphate 1-dehydrogenase  49.17 
 
 
491 aa  470  1.0000000000000001e-131  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.649148  n/a   
 
 
-
 
NC_010468  EcolC_1780  glucose-6-phosphate 1-dehydrogenase  49.17 
 
 
491 aa  470  1.0000000000000001e-131  Escherichia coli ATCC 8739  Bacteria  normal  normal  0.093662 
 
 
-
 
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