More than 300 homologs were found in PanDaTox collection
for query gene Smal_3007 on replicon NC_011071
Organism: Stenotrophomonas maltophilia R551-3



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011071  Smal_3007  methyl-accepting chemotaxis sensory transducer  100 
 
 
707 aa  1395    Stenotrophomonas maltophilia R551-3  Bacteria  normal  decreased coverage  0.00177393 
 
 
-
 
NC_011071  Smal_1169  methyl-accepting chemotaxis sensory transducer  50.87 
 
 
740 aa  587  1e-166  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_00047  chemotaxis protein  48.57 
 
 
733 aa  562  1.0000000000000001e-159  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00041  chemotaxis protein  44.97 
 
 
752 aa  549  1e-155  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.292066  n/a   
 
 
-
 
NC_010717  PXO_00046  chemotaxis protein  46.46 
 
 
753 aa  550  1e-155  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_1846  methyl-accepting chemotaxis sensory transducer  53.73 
 
 
755 aa  535  1e-150  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.422723  normal  0.381468 
 
 
-
 
NC_011071  Smal_3537  methyl-accepting chemotaxis sensory transducer  55.64 
 
 
843 aa  497  1e-139  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_00043  chemotaxis protein  49.91 
 
 
705 aa  490  1e-137  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.51691  n/a   
 
 
-
 
NC_011071  Smal_3896  methyl-accepting chemotaxis sensory transducer  54.66 
 
 
706 aa  476  1e-133  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.337027  normal  0.882129 
 
 
-
 
NC_011071  Smal_1851  methyl-accepting chemotaxis sensory transducer  51.3 
 
 
745 aa  447  1.0000000000000001e-124  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.195185 
 
 
-
 
NC_010717  PXO_00045  chemotaxis protein  38.6 
 
 
691 aa  382  1e-104  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.505093  n/a   
 
 
-
 
NC_011071  Smal_1847  methyl-accepting chemotaxis sensory transducer  37.47 
 
 
793 aa  368  1e-100  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.143361  normal  0.380239 
 
 
-
 
NC_010717  PXO_00054  methyl-accepting chemotaxis protein  36.83 
 
 
797 aa  365  1e-99  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.276697  n/a   
 
 
-
 
NC_010717  PXO_00039  chemotaxis protein  57.02 
 
 
775 aa  350  7e-95  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.371493  n/a   
 
 
-
 
NC_007298  Daro_0728  histidine kinase, HAMP region: chemotaxis sensory transducer  34.68 
 
 
792 aa  314  2.9999999999999996e-84  Dechloromonas aromatica RCB  Bacteria  normal  0.066629  normal 
 
 
-
 
NC_007298  Daro_0729  PAS  52.3 
 
 
945 aa  293  5e-78  Dechloromonas aromatica RCB  Bacteria  normal  0.0635035  normal 
 
 
-
 
NC_011071  Smal_3993  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  55.23 
 
 
701 aa  293  7e-78  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.311816 
 
 
-
 
NC_007912  Sde_3105  putative methyl-accepting chemotaxis sensory transducer  47.83 
 
 
767 aa  292  2e-77  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_0164  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  46.26 
 
 
1123 aa  289  1e-76  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_0184  methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor  45.98 
 
 
863 aa  289  2e-76  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_3497  putative methyl-accepting chemotaxis sensory transducer  46.05 
 
 
860 aa  286  5.999999999999999e-76  Shewanella amazonensis SB2B  Bacteria  normal  0.19961  normal 
 
 
-
 
NC_009997  Sbal195_2362  methyl-accepting chemotaxis sensory transducer  48.97 
 
 
664 aa  285  3.0000000000000004e-75  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_2245  methyl-accepting chemotaxis sensory transducer  48.97 
 
 
664 aa  284  4.0000000000000003e-75  Shewanella baltica OS185  Bacteria  normal  0.232427  n/a   
 
 
-
 
NC_011663  Sbal223_2100  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  48.97 
 
 
665 aa  284  4.0000000000000003e-75  Shewanella baltica OS223  Bacteria  normal  0.328344  normal 
 
 
-
 
NC_009052  Sbal_2114  methyl-accepting chemotaxis sensory transducer  48.97 
 
 
657 aa  283  6.000000000000001e-75  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_2123  methyl-accepting chemotaxis protein  50 
 
 
654 aa  282  1e-74  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008321  Shewmr4_2091  methyl-accepting chemotaxis sensory transducer  48.55 
 
 
656 aa  282  2e-74  Shewanella sp. MR-4  Bacteria  normal  normal  0.684691 
 
 
-
 
NC_008322  Shewmr7_1883  methyl-accepting chemotaxis sensory transducer  48.55 
 
 
656 aa  282  2e-74  Shewanella sp. MR-7  Bacteria  normal  normal  0.113479 
 
 
-
 
NC_008463  PA14_02220  putative chemotaxis transducer  51.61 
 
 
679 aa  281  2e-74  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.329962  normal 
 
 
-
 
NC_008577  Shewana3_2216  methyl-accepting chemotaxis sensory transducer  48.55 
 
 
657 aa  281  2e-74  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_0256  chemotaxis transducer  51.01 
 
 
679 aa  281  4e-74  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_0111  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  45.1 
 
 
864 aa  276  7e-73  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_0660  chemotaxis sensory transducer  56.21 
 
 
586 aa  266  8e-70  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.756829  normal 
 
 
-
 
NC_009075  BURPS668_A0206  methyl-accepting chemotaxis protein  47.98 
 
 
793 aa  266  1e-69  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_2163  methyl-accepting chemotaxis sensory transducer  45.59 
 
 
610 aa  265  2e-69  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II0158  chemotaxis protein  47.98 
 
 
779 aa  264  4e-69  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B2682  methyl-accepting chemotaxis sensory transducer  55.8 
 
 
580 aa  264  4e-69  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B4001  histidine kinase, HAMP region: chemotaxis sensory transducer  52.77 
 
 
585 aa  261  2e-68  Ralstonia eutropha JMP134  Bacteria  normal  0.0946714  n/a   
 
 
-
 
NC_007963  Csal_2019  methyl-accepting chemotaxis sensory transducer  52 
 
 
567 aa  259  9e-68  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_3633  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  52.5 
 
 
845 aa  259  1e-67  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.522396 
 
 
-
 
NC_009708  YpsIP31758_1642  methyl-accepting chemotaxis protein  53.12 
 
 
557 aa  258  2e-67  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_1753  methyl-accepting chemotaxis sensory transducer  53.12 
 
 
557 aa  258  2e-67  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B5602  methyl-accepting chemotaxis sensory transducer  54.75 
 
 
594 aa  257  5e-67  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A3516  methyl-accepting chemotaxis protein  52.78 
 
 
557 aa  256  8e-67  Yersinia pestis Angola  Bacteria  normal  normal  0.698348 
 
 
-
 
NC_010681  Bphyt_0409  methyl-accepting chemotaxis sensory transducer  53.9 
 
 
585 aa  256  1.0000000000000001e-66  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_009456  VC0395_0151  methyl-accepting chemotaxis protein  42.69 
 
 
678 aa  255  2.0000000000000002e-66  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_5641  methyl-accepting chemotaxis sensory transducer  51.34 
 
 
519 aa  255  2.0000000000000002e-66  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_1542  methyl-accepting chemotaxis sensory transducer  50.69 
 
 
566 aa  254  4.0000000000000004e-66  Dickeya zeae Ech1591  Bacteria  normal  0.350049  n/a   
 
 
-
 
NC_010627  Bphy_7569  methyl-accepting chemotaxis sensory transducer  58.14 
 
 
576 aa  253  6e-66  Burkholderia phymatum STM815  Bacteria  normal  0.448898  normal  0.153923 
 
 
-
 
NC_007434  BURPS1710b_2139  methyl-accepting chemotaxis protein  51.4 
 
 
616 aa  253  6e-66  Burkholderia pseudomallei 1710b  Bacteria  normal  0.942679  n/a   
 
 
-
 
NC_007651  BTH_I2374  methyl-accepting chemotaxis protein  51.59 
 
 
586 aa  253  7e-66  Burkholderia thailandensis E264  Bacteria  normal  0.205822  n/a   
 
 
-
 
NC_010524  Lcho_3799  methyl-accepting chemotaxis sensory transducer  28.7 
 
 
772 aa  253  8.000000000000001e-66  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_007912  Sde_3112  putative methyl-accepting chemotaxis sensory transducer  42.9 
 
 
1029 aa  253  8.000000000000001e-66  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_007336  Reut_C6319  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  54.93 
 
 
601 aa  253  9.000000000000001e-66  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_003296  RS02605  putative methyl-accepting chemotaxis transducer transmembrane protein  56.45 
 
 
513 aa  252  1e-65  Ralstonia solanacearum GMI1000  Bacteria  normal  0.0414906  normal  0.0642458 
 
 
-
 
NC_006348  BMA1130  methyl-accepting chemotaxis protein  51.4 
 
 
580 aa  253  1e-65  Burkholderia mallei ATCC 23344  Bacteria  normal  0.306094  n/a   
 
 
-
 
NC_007404  Tbd_1622  methyl-accepting chemotaxis sensory transducer  54.85 
 
 
572 aa  253  1e-65  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.415216  normal 
 
 
-
 
NC_008785  BMASAVP1_A1571  methyl-accepting chemotaxis protein  51.4 
 
 
580 aa  253  1e-65  Burkholderia mallei SAVP1  Bacteria  normal  0.295886  n/a   
 
 
-
 
NC_008836  BMA10229_A0232  methyl-accepting chemotaxis protein  51.4 
 
 
580 aa  253  1e-65  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_1514  methyl-accepting chemotaxis sensory transducer  47.32 
 
 
562 aa  253  1e-65  Dickeya dadantii Ech703  Bacteria  normal  0.957025  n/a   
 
 
-
 
NC_009074  BURPS668_1983  methyl-accepting chemotaxis protein  51.4 
 
 
580 aa  253  1e-65  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_0927  methyl-accepting chemotaxis protein  51.4 
 
 
580 aa  253  1e-65  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_2002  methyl-accepting chemotaxis protein  51.4 
 
 
580 aa  253  1e-65  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_2108  methyl-accepting chemotaxis sensory transducer  48.2 
 
 
556 aa  253  1e-65  Dickeya dadantii Ech703  Bacteria  normal  0.0190315  n/a   
 
 
-
 
NC_007348  Reut_B5868  methyl-accepting chemotaxis sensory transducer  51.66 
 
 
541 aa  252  2e-65  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1804  methyl-accepting chemotaxis sensory transducer  45.45 
 
 
562 aa  251  2e-65  Dickeya zeae Ech1591  Bacteria  normal  0.0522685  n/a   
 
 
-
 
NC_007404  Tbd_1619  chemotaxis sensory transducer  60.92 
 
 
559 aa  251  3e-65  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.940607  normal  0.203143 
 
 
-
 
NC_007963  Csal_2778  methyl-accepting chemotaxis sensory transducer  50.34 
 
 
544 aa  251  3e-65  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.643433  n/a   
 
 
-
 
NC_010676  Bphyt_6645  methyl-accepting chemotaxis sensory transducer  56.77 
 
 
583 aa  251  4e-65  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.983597 
 
 
-
 
NC_012791  Vapar_4189  methyl-accepting chemotaxis sensory transducer  53.04 
 
 
559 aa  251  5e-65  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_4185  methyl-accepting chemotaxis sensory transducer  53.62 
 
 
579 aa  251  5e-65  Variovorax paradoxus S110  Bacteria  normal  0.356775  n/a   
 
 
-
 
NC_007974  Rmet_3683  methyl-accepting chemotaxis sensory transducer  59.14 
 
 
613 aa  250  5e-65  Cupriavidus metallidurans CH34  Bacteria  normal  0.755698  normal  0.0578518 
 
 
-
 
NC_007974  Rmet_5250  methyl-accepting chemotaxis protein, sensory transducer  53.29 
 
 
677 aa  251  5e-65  Cupriavidus metallidurans CH34  Bacteria  normal  0.0837898  normal  0.0130353 
 
 
-
 
NC_010002  Daci_3767  methyl-accepting chemotaxis sensory transducer  47.96 
 
 
544 aa  250  7e-65  Delftia acidovorans SPH-1  Bacteria  normal  0.155197  normal  0.170651 
 
 
-
 
NC_012912  Dd1591_0769  methyl-accepting chemotaxis sensory transducer  48.81 
 
 
505 aa  250  8e-65  Dickeya zeae Ech1591  Bacteria  normal  0.0409416  n/a   
 
 
-
 
NC_012856  Rpic12D_0523  methyl-accepting chemotaxis sensory transducer with Cache sensor  54.77 
 
 
608 aa  249  9e-65  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_012848  Rleg_5166  methyl-accepting chemotaxis sensory transducer  39.14 
 
 
669 aa  249  9e-65  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_0990  methyl-accepting chemotaxis sensory transducer  50.17 
 
 
542 aa  249  1e-64  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B5547  methyl-accepting chemotaxis sensory transducer  52.4 
 
 
520 aa  248  2e-64  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A4301  methyl-accepting chemotaxis sensory transducer  52.23 
 
 
587 aa  248  2e-64  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_3042  methyl-accepting chemotaxis sensory transducer  53.9 
 
 
515 aa  248  3e-64  Ralstonia pickettii 12J  Bacteria  normal  0.401177  normal 
 
 
-
 
NC_007348  Reut_B5601  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  55.63 
 
 
551 aa  248  3e-64  Ralstonia eutropha JMP134  Bacteria  normal  0.510218  n/a   
 
 
-
 
NC_007952  Bxe_B0129  methyl-accepting chemotaxis sensory transducer  49.32 
 
 
511 aa  248  3e-64  Burkholderia xenovorans LB400  Bacteria  normal  0.469561  normal 
 
 
-
 
NC_012856  Rpic12D_2632  methyl-accepting chemotaxis sensory transducer with Cache sensor  53.06 
 
 
515 aa  248  4e-64  Ralstonia pickettii 12D  Bacteria  normal  0.397554  normal  0.945455 
 
 
-
 
NC_012791  Vapar_4184  methyl-accepting chemotaxis sensory transducer  52.46 
 
 
680 aa  247  4.9999999999999997e-64  Variovorax paradoxus S110  Bacteria  normal  0.12793  n/a   
 
 
-
 
NC_010678  Rpic_4237  methyl-accepting chemotaxis sensory transducer  58.75 
 
 
513 aa  247  4.9999999999999997e-64  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_012857  Rpic12D_4347  methyl-accepting chemotaxis sensory transducer with Cache sensor  58.75 
 
 
513 aa  247  4.9999999999999997e-64  Ralstonia pickettii 12D  Bacteria  normal  normal  0.473159 
 
 
-
 
NC_011083  SeHA_C3889  methyl-accepting chemotaxis protein I  50.34 
 
 
547 aa  246  6.999999999999999e-64  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_011094  SeSA_A3769  methyl-accepting chemotaxis protein I  50.34 
 
 
547 aa  246  8e-64  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_1569  methyl-accepting chemotaxis sensory transducer  49.83 
 
 
554 aa  246  9e-64  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc0606  putative methyl-accepting chemotaxis transmembrane protein  54.55 
 
 
617 aa  246  9.999999999999999e-64  Ralstonia solanacearum GMI1000  Bacteria  normal  0.535208  normal  0.212062 
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  50.34 
 
 
583 aa  246  9.999999999999999e-64  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_008825  Mpe_A2548  methyl-accepting chemotaxis protein  50.87 
 
 
525 aa  246  9.999999999999999e-64  Methylibium petroleiphilum PM1  Bacteria  decreased coverage  0.00975221  normal  0.500866 
 
 
-
 
NC_008392  Bamb_6127  methyl-accepting chemotaxis sensory transducer  49.33 
 
 
519 aa  246  9.999999999999999e-64  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.0128017 
 
 
-
 
NC_010681  Bphyt_0231  methyl-accepting chemotaxis sensory transducer  57.81 
 
 
324 aa  246  9.999999999999999e-64  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_0536  methyl-accepting chemotaxis sensory transducer with Cache sensor  54.06 
 
 
609 aa  246  9.999999999999999e-64  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_2241  methyl-accepting chemotaxis sensory transducer  52.36 
 
 
536 aa  245  1.9999999999999999e-63  Acidovorax citrulli AAC00-1  Bacteria  unclonable  0.000000611014  hitchhiker  0.00000521325 
 
 
-
 
NC_007520  Tcr_1984  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  40.5 
 
 
954 aa  245  1.9999999999999999e-63  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I0438  methyl-accepting chemotaxis protein  55.24 
 
 
512 aa  245  1.9999999999999999e-63  Burkholderia thailandensis E264  Bacteria  normal  0.212381  n/a   
 
 
-
 
NC_008752  Aave_0104  methyl-accepting chemotaxis sensory transducer  49.83 
 
 
622 aa  245  1.9999999999999999e-63  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>