More than 300 homologs were found in PanDaTox collection
for query gene Sked_36930 on replicon NC_013521
Organism: Sanguibacter keddieii DSM 10542



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013521  Sked_36930  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  100 
 
 
222 aa  435  1e-121  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.811978 
 
 
-
 
NC_013131  Caci_1951  two component transcriptional regulator, LuxR family  65.91 
 
 
226 aa  269  2.9999999999999997e-71  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0924411 
 
 
-
 
NC_013093  Amir_6405  two component transcriptional regulator, LuxR family  62.61 
 
 
225 aa  266  2.9999999999999995e-70  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_4684  two component LuxR family transcriptional regulator  63.72 
 
 
223 aa  266  2.9999999999999995e-70  Frankia sp. EAN1pec  Bacteria  normal  0.51425  normal 
 
 
-
 
NC_013235  Namu_3387  two component transcriptional regulator, LuxR family  63.68 
 
 
223 aa  262  3e-69  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.0000386408  hitchhiker  0.000570848 
 
 
-
 
NC_013131  Caci_3748  two component transcriptional regulator, LuxR family  63.23 
 
 
236 aa  261  6e-69  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_4511  two component transcriptional regulator, LuxR family  63.85 
 
 
226 aa  260  8.999999999999999e-69  Actinosynnema mirum DSM 43827  Bacteria  normal  0.11054  n/a   
 
 
-
 
NC_009921  Franean1_3390  two component LuxR family transcriptional regulator  62.1 
 
 
226 aa  253  1.0000000000000001e-66  Frankia sp. EAN1pec  Bacteria  normal  0.0389848  normal 
 
 
-
 
NC_013131  Caci_7160  two component transcriptional regulator, LuxR family  62.78 
 
 
224 aa  251  6e-66  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_2015  two component transcriptional regulator, LuxR family  61.33 
 
 
232 aa  248  4e-65  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.706703  n/a   
 
 
-
 
NC_009921  Franean1_3727  two component LuxR family transcriptional regulator  59.47 
 
 
226 aa  248  6e-65  Frankia sp. EAN1pec  Bacteria  normal  normal  0.554715 
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  59.09 
 
 
224 aa  244  6.999999999999999e-64  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_013595  Sros_5619  response regulator receiver protein  60.47 
 
 
226 aa  243  9.999999999999999e-64  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0556461  normal  0.802866 
 
 
-
 
NC_014210  Ndas_2087  two component transcriptional regulator, LuxR family  59.53 
 
 
247 aa  241  7e-63  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.73112  normal 
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  60.93 
 
 
222 aa  239  2e-62  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal 
 
 
-
 
NC_009921  Franean1_7117  two component LuxR family transcriptional regulator  57.87 
 
 
214 aa  235  3e-61  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  59.09 
 
 
221 aa  233  1.0000000000000001e-60  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  58.74 
 
 
220 aa  231  8.000000000000001e-60  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  58.18 
 
 
215 aa  231  8.000000000000001e-60  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_013530  Xcel_1618  two component transcriptional regulator, LuxR family  59.28 
 
 
220 aa  229  3e-59  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_1740  two component transcriptional regulator, LuxR family  56.28 
 
 
228 aa  226  2e-58  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  57.34 
 
 
221 aa  225  3e-58  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal 
 
 
-
 
NC_013595  Sros_8243  response regulator receiver protein  59.91 
 
 
217 aa  225  3e-58  Streptosporangium roseum DSM 43021  Bacteria  normal  0.931194  normal  0.230681 
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  55.05 
 
 
225 aa  224  1e-57  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_013441  Gbro_4119  response regulator receiver  58.45 
 
 
230 aa  222  3e-57  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  56.16 
 
 
217 aa  220  9.999999999999999e-57  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000794288  unclonable  0.0000000332591 
 
 
-
 
NC_013595  Sros_4508  response regulator receiver protein  57.27 
 
 
219 aa  220  9.999999999999999e-57  Streptosporangium roseum DSM 43021  Bacteria  normal  0.401356  normal  0.568133 
 
 
-
 
NC_013947  Snas_3287  two component transcriptional regulator, LuxR family  55.81 
 
 
233 aa  219  1.9999999999999999e-56  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0842926  normal  0.330639 
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  55.5 
 
 
222 aa  219  3e-56  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_6049  two component transcriptional regulator, LuxR family  60.09 
 
 
224 aa  219  3e-56  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.764436  normal 
 
 
-
 
NC_013947  Snas_4662  two component transcriptional regulator, LuxR family  57.94 
 
 
221 aa  219  3e-56  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.142047  hitchhiker  0.00679998 
 
 
-
 
NC_007333  Tfu_0767  LuxR response regulator receiver  58.53 
 
 
221 aa  218  7e-56  Thermobifida fusca YX  Bacteria  normal  0.88397  n/a   
 
 
-
 
NC_013739  Cwoe_4855  two component transcriptional regulator, LuxR family  55.79 
 
 
244 aa  214  5.9999999999999996e-55  Conexibacter woesei DSM 14684  Bacteria  normal  0.093919  normal 
 
 
-
 
NC_012669  Bcav_1731  two component transcriptional regulator, LuxR family  56.42 
 
 
224 aa  214  7e-55  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.550315  normal 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  52.44 
 
 
226 aa  212  3.9999999999999995e-54  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_012669  Bcav_4002  two component transcriptional regulator, LuxR family  54.38 
 
 
222 aa  210  1e-53  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.947887  normal  0.770727 
 
 
-
 
NC_013093  Amir_2232  two component transcriptional regulator, LuxR family  57.41 
 
 
302 aa  210  1e-53  Actinosynnema mirum DSM 43827  Bacteria  normal  0.501029  n/a   
 
 
-
 
NC_013595  Sros_3251  response regulator receiver protein  50.45 
 
 
221 aa  210  1e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0793449  normal 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  53.81 
 
 
220 aa  209  3e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_013170  Ccur_01320  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  54.17 
 
 
261 aa  208  4e-53  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_5265  two component transcriptional regulator, LuxR family  54.88 
 
 
218 aa  208  5e-53  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_0645  two component transcriptional regulator, LuxR family  54.13 
 
 
220 aa  208  5e-53  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.691779  normal 
 
 
-
 
NC_013595  Sros_4577  response regulator receiver protein  51.58 
 
 
223 aa  206  2e-52  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.172592 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  52.86 
 
 
227 aa  206  2e-52  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  54.5 
 
 
226 aa  206  2e-52  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_013204  Elen_2822  two component transcriptional regulator, LuxR family  55.31 
 
 
228 aa  206  3e-52  Eggerthella lenta DSM 2243  Bacteria  normal  0.0415698  normal  0.590713 
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  52.73 
 
 
241 aa  205  5e-52  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_013521  Sked_37860  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  56.88 
 
 
221 aa  204  8e-52  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  51.85 
 
 
229 aa  204  9e-52  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  51.98 
 
 
229 aa  204  1e-51  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  52.91 
 
 
220 aa  204  1e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_4491  two component transcriptional regulator, LuxR family  52.78 
 
 
225 aa  203  2e-51  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  52.94 
 
 
223 aa  202  5e-51  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal 
 
 
-
 
NC_013131  Caci_7843  two component transcriptional regulator, LuxR family  51.5 
 
 
231 aa  201  8e-51  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.176081 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  54.5 
 
 
225 aa  201  8e-51  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  52.94 
 
 
230 aa  200  9.999999999999999e-51  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013169  Ksed_04500  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  50 
 
 
244 aa  200  1.9999999999999998e-50  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_010816  BLD_0671  putative response regulator  46.47 
 
 
248 aa  199  1.9999999999999998e-50  Bifidobacterium longum DJO10A  Bacteria  normal  0.248332  n/a   
 
 
-
 
NC_014151  Cfla_2391  two component transcriptional regulator, LuxR family  52.16 
 
 
239 aa  199  3e-50  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0696687  hitchhiker  0.00128542 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  50.67 
 
 
239 aa  198  3.9999999999999996e-50  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_4937  two component transcriptional regulator, LuxR family  52.09 
 
 
224 aa  199  3.9999999999999996e-50  Conexibacter woesei DSM 14684  Bacteria  normal  0.570807  normal  0.210467 
 
 
-
 
NC_013131  Caci_6963  two component transcriptional regulator, LuxR family  50.66 
 
 
225 aa  198  5e-50  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.029709  normal 
 
 
-
 
NC_012669  Bcav_1049  two component transcriptional regulator, LuxR family  53.12 
 
 
222 aa  198  6e-50  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.661499  normal  0.245945 
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  52.04 
 
 
224 aa  197  1.0000000000000001e-49  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_009953  Sare_1782  two component LuxR family transcriptional regulator  52.94 
 
 
230 aa  197  1.0000000000000001e-49  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.0025253 
 
 
-
 
NC_013947  Snas_4575  two component transcriptional regulator, LuxR family  54.26 
 
 
224 aa  195  6e-49  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.703378  normal  0.112036 
 
 
-
 
NC_012669  Bcav_0335  two component transcriptional regulator, LuxR family  51.83 
 
 
220 aa  195  6e-49  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  53.46 
 
 
218 aa  194  7e-49  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  51.83 
 
 
241 aa  194  8.000000000000001e-49  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  52.73 
 
 
225 aa  194  9e-49  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal 
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  49.31 
 
 
231 aa  194  9e-49  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  50.23 
 
 
225 aa  193  1e-48  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  50.67 
 
 
218 aa  193  1e-48  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_013721  HMPREF0424_0644  response regulator receiver domain protein  40.94 
 
 
261 aa  193  1e-48  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.520039 
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  51.36 
 
 
234 aa  194  1e-48  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_2533  response regulator receiver protein  50 
 
 
220 aa  193  1e-48  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.495874 
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  49.3 
 
 
221 aa  193  2e-48  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_013521  Sked_19740  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  49.77 
 
 
216 aa  192  2e-48  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.682926  normal 
 
 
-
 
NC_014151  Cfla_0278  two component transcriptional regulator, LuxR family  48.61 
 
 
225 aa  193  2e-48  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.000789071 
 
 
-
 
NC_014210  Ndas_1477  two component transcriptional regulator, LuxR family  50.45 
 
 
234 aa  193  2e-48  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.594471  normal 
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  51.82 
 
 
221 aa  192  3e-48  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_3768  two component transcriptional regulator, LuxR family  51.08 
 
 
223 aa  192  3e-48  Conexibacter woesei DSM 14684  Bacteria  normal  0.28303  normal  0.763501 
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  52.25 
 
 
218 aa  192  4e-48  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  52.29 
 
 
215 aa  191  5e-48  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_013131  Caci_7415  two component transcriptional regulator, LuxR family  50.46 
 
 
228 aa  191  6e-48  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.933403  normal 
 
 
-
 
NC_012669  Bcav_2710  two component transcriptional regulator, LuxR family  51.35 
 
 
230 aa  191  6e-48  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.248821  normal  0.606697 
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  52.07 
 
 
225 aa  191  8e-48  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_007777  Francci3_0303  two component LuxR family transcriptional regulator  52.09 
 
 
214 aa  190  1e-47  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_4132  response regulator receiver  50.45 
 
 
235 aa  189  2e-47  Salinispora tropica CNB-440  Bacteria  normal  0.232221  normal 
 
 
-
 
NC_009664  Krad_1350  two component transcriptional regulator, LuxR family  51.33 
 
 
249 aa  189  2e-47  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.691965  normal 
 
 
-
 
NC_013131  Caci_0683  two component transcriptional regulator, LuxR family  49.12 
 
 
234 aa  189  2e-47  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.344925  normal 
 
 
-
 
NC_013530  Xcel_2601  two component transcriptional regulator, LuxR family  48.2 
 
 
234 aa  189  2e-47  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.1212  n/a   
 
 
-
 
NC_013595  Sros_1746  response regulator receiver protein  54.42 
 
 
217 aa  190  2e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  0.59096  normal  0.157721 
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  49.55 
 
 
226 aa  189  2.9999999999999997e-47  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_3912  two component transcriptional regulator, LuxR family  50.92 
 
 
230 aa  189  2.9999999999999997e-47  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  50.46 
 
 
224 aa  188  4e-47  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_008541  Arth_4134  two component LuxR family transcriptional regulator  47.06 
 
 
250 aa  188  5e-47  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_2656  two component transcriptional regulator, LuxR family  50.69 
 
 
226 aa  188  5e-47  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.161573  normal 
 
 
-
 
NC_013521  Sked_08490  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  48.7 
 
 
236 aa  188  5.999999999999999e-47  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.199706  normal  0.526513 
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  51.38 
 
 
225 aa  187  9e-47  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
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