More than 300 homologs were found in PanDaTox collection
for query gene Sked_30940 on replicon NC_013521
Organism: Sanguibacter keddieii DSM 10542



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013521  Sked_30940  methyl-accepting chemotaxis protein  100 
 
 
407 aa  785    Sanguibacter keddieii DSM 10542  Bacteria  normal  0.682285  normal 
 
 
-
 
NC_013521  Sked_30950  methyl-accepting chemotaxis protein  65.5 
 
 
540 aa  363  2e-99  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.664181  normal 
 
 
-
 
NC_013521  Sked_30970  methyl-accepting chemotaxis protein  57.26 
 
 
562 aa  322  6e-87  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_30920  methyl-accepting chemotaxis protein  58.92 
 
 
583 aa  319  7e-86  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_3602  chemotaxis sensory transducer  55.13 
 
 
518 aa  318  1e-85  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_06110  methyl-accepting chemotaxis protein  59.01 
 
 
533 aa  316  4e-85  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.232988  normal 
 
 
-
 
NC_013174  Jden_1961  methyl-accepting chemotaxis sensory transducer  55.97 
 
 
535 aa  315  9.999999999999999e-85  Jonesia denitrificans DSM 20603  Bacteria  normal  0.286616  normal 
 
 
-
 
NC_013174  Jden_0421  methyl-accepting chemotaxis sensory transducer  55.83 
 
 
623 aa  304  2.0000000000000002e-81  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.308823 
 
 
-
 
NC_013521  Sked_36630  methyl-accepting chemotaxis protein  53.94 
 
 
540 aa  301  1e-80  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_32370  methyl-accepting chemotaxis protein  55.79 
 
 
531 aa  301  2e-80  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_30960  methyl-accepting chemotaxis protein  59.65 
 
 
540 aa  298  2e-79  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_2323  methyl-accepting chemotaxis sensory transducer  56.91 
 
 
545 aa  295  1e-78  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_05890  methyl-accepting chemotaxis protein  54.6 
 
 
538 aa  292  9e-78  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.383381 
 
 
-
 
NC_013174  Jden_1995  methyl-accepting chemotaxis sensory transducer  50.44 
 
 
394 aa  291  1e-77  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_32360  methyl-accepting chemotaxis protein  56.67 
 
 
530 aa  286  4e-76  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_36620  methyl-accepting chemotaxis protein  54.14 
 
 
543 aa  285  7e-76  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0835028  normal  0.811978 
 
 
-
 
NC_013757  Gobs_5009  methyl-accepting chemotaxis sensory transducer  54.76 
 
 
537 aa  283  3.0000000000000004e-75  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_2984  chemotaxis sensory transducer  50.88 
 
 
545 aa  281  1e-74  Nocardioides sp. JS614  Bacteria  normal  0.660626  n/a   
 
 
-
 
NC_013174  Jden_0359  methyl-accepting chemotaxis sensory transducer  49.44 
 
 
542 aa  280  2e-74  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_0360  methyl-accepting chemotaxis sensory transducer  57.78 
 
 
544 aa  278  2e-73  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_5010  methyl-accepting chemotaxis sensory transducer  56.41 
 
 
538 aa  271  2e-71  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_5008  methyl-accepting chemotaxis sensory transducer  56.83 
 
 
546 aa  269  5.9999999999999995e-71  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_4449  methyl-accepting chemotaxis sensory transducer  51.34 
 
 
538 aa  262  6.999999999999999e-69  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.018308  normal 
 
 
-
 
NC_008699  Noca_1293  chemotaxis sensory transducer  50 
 
 
542 aa  262  6.999999999999999e-69  Nocardioides sp. JS614  Bacteria  normal  0.320257  n/a   
 
 
-
 
NC_013093  Amir_2197  methyl-accepting chemotaxis sensory transducer  47.9 
 
 
522 aa  258  1e-67  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_0375  methyl-accepting chemotaxis sensory transducer  54.31 
 
 
544 aa  255  8e-67  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_27420  methyl-accepting chemotaxis protein  51.42 
 
 
540 aa  252  9.000000000000001e-66  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.141989  normal 
 
 
-
 
NC_013521  Sked_07600  methyl-accepting chemotaxis protein  49.71 
 
 
533 aa  248  2e-64  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.0696595 
 
 
-
 
NC_013757  Gobs_0109  methyl-accepting chemotaxis sensory transducer  51.9 
 
 
528 aa  247  3e-64  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.268294  n/a   
 
 
-
 
NC_009664  Krad_4077  methyl-accepting chemotaxis sensory transducer  50.15 
 
 
545 aa  245  9e-64  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_1672  methyl-accepting chemotaxis sensory transducer  46.23 
 
 
904 aa  242  7.999999999999999e-63  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.707022 
 
 
-
 
NC_009664  Krad_2095  methyl-accepting chemotaxis sensory transducer  50.5 
 
 
538 aa  241  2e-62  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_03110  methyl-accepting chemotaxis protein  46.86 
 
 
347 aa  236  4e-61  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0123169  normal 
 
 
-
 
NC_008009  Acid345_1526  methyl-accepting chemotaxis sensory transducer  50.56 
 
 
858 aa  233  3e-60  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.787952  normal  0.35844 
 
 
-
 
NC_013757  Gobs_3321  methyl-accepting chemotaxis sensory transducer  47.19 
 
 
702 aa  233  4.0000000000000004e-60  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.105528  n/a   
 
 
-
 
NC_008578  Acel_1751  methyl-accepting chemotaxis sensory transducer  50.78 
 
 
547 aa  229  8e-59  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_1613  methyl-accepting chemotaxis sensory transducer  48.67 
 
 
523 aa  228  1e-58  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.00385179  normal 
 
 
-
 
NC_008312  Tery_4229  methyl-accepting chemotaxis sensory transducer  57.08 
 
 
1150 aa  228  1e-58  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.591053 
 
 
-
 
NC_008699  Noca_1974  chemotaxis sensory transducer  47.59 
 
 
535 aa  224  2e-57  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_0199  methyl-accepting chemotaxis sensory transducer  47.5 
 
 
532 aa  224  3e-57  Actinosynnema mirum DSM 43827  Bacteria  normal  0.570256  n/a   
 
 
-
 
NC_009664  Krad_0651  methyl-accepting chemotaxis sensory transducer  45.83 
 
 
535 aa  214  1.9999999999999998e-54  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.406234  normal  0.0260089 
 
 
-
 
NC_013093  Amir_1755  methyl-accepting chemotaxis sensory transducer  47.71 
 
 
538 aa  208  1e-52  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_4184  methyl-accepting chemotaxis sensory transducer  48.2 
 
 
536 aa  206  5e-52  Actinosynnema mirum DSM 43827  Bacteria  normal  0.483396  n/a   
 
 
-
 
NC_013093  Amir_3089  methyl-accepting chemotaxis sensory transducer  43.11 
 
 
526 aa  202  9.999999999999999e-51  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_1002  methyl-accepting chemotaxis sensory transducer  43.33 
 
 
529 aa  194  3e-48  Kineococcus radiotolerans SRS30216  Bacteria  normal  hitchhiker  0.00624598 
 
 
-
 
NC_014148  Plim_1909  chemotaxis sensory transducer  46.15 
 
 
965 aa  193  4e-48  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.11776  n/a   
 
 
-
 
NC_009664  Krad_2460  methyl-accepting chemotaxis sensory transducer  43.23 
 
 
531 aa  193  4e-48  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_0026  methyl-accepting chemotaxis sensory transducer  38.29 
 
 
686 aa  193  5e-48  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_0127  methyl-accepting chemotaxis sensory transducer  41.35 
 
 
397 aa  192  7e-48  Acidothermus cellulolyticus 11B  Bacteria  normal  0.362921  normal 
 
 
-
 
NC_009664  Krad_4271  methyl-accepting chemotaxis sensory transducer  45.22 
 
 
535 aa  190  4e-47  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.79817  normal  0.653673 
 
 
-
 
NC_013093  Amir_0198  methyl-accepting chemotaxis sensory transducer  41.35 
 
 
715 aa  189  7e-47  Actinosynnema mirum DSM 43827  Bacteria  normal  0.419669  n/a   
 
 
-
 
NC_013173  Dbac_2646  methyl-accepting chemotaxis sensory transducer  35.45 
 
 
625 aa  189  8e-47  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_1606  methyl-accepting chemotaxis sensory transducer  39.88 
 
 
545 aa  187  2e-46  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0156977  normal 
 
 
-
 
NC_009664  Krad_1913  methyl-accepting chemotaxis sensory transducer  43.56 
 
 
524 aa  188  2e-46  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0934644  normal 
 
 
-
 
NC_013093  Amir_4789  methyl-accepting chemotaxis sensory transducer  46.59 
 
 
493 aa  187  3e-46  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013124  Afer_0753  methyl-accepting chemotaxis sensory transducer  45.13 
 
 
558 aa  186  4e-46  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.75846  n/a   
 
 
-
 
NC_009664  Krad_1914  methyl-accepting chemotaxis sensory transducer  40.9 
 
 
550 aa  186  5e-46  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.37871  normal 
 
 
-
 
NC_013174  Jden_0673  methyl-accepting chemotaxis sensory transducer with Cache sensor  50.9 
 
 
533 aa  186  6e-46  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.349323 
 
 
-
 
NC_008699  Noca_1783  chemotaxis sensory transducer  42.77 
 
 
515 aa  185  1.0000000000000001e-45  Nocardioides sp. JS614  Bacteria  normal  0.552405  n/a   
 
 
-
 
NC_009664  Krad_0049  methyl-accepting chemotaxis sensory transducer  45.25 
 
 
539 aa  184  3e-45  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0550535  normal  0.228084 
 
 
-
 
NC_009664  Krad_1935  methyl-accepting chemotaxis sensory transducer  44.16 
 
 
530 aa  182  7e-45  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.376441  normal 
 
 
-
 
NC_007643  Rru_A1197  chemotaxis sensory transducer  40.23 
 
 
688 aa  182  8.000000000000001e-45  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_3380  methyl-accepting chemotaxis sensory transducer  38.32 
 
 
567 aa  180  2.9999999999999997e-44  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.689596 
 
 
-
 
NC_009485  BBta_6717  methyl-accepting chemotaxis sensory transducer  36.89 
 
 
741 aa  180  4e-44  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.447835  normal  0.587139 
 
 
-
 
NC_007925  RPC_2149  methyl-accepting chemotaxis sensory transducer  40.12 
 
 
675 aa  179  4.999999999999999e-44  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.0391093 
 
 
-
 
NC_007925  RPC_2744  methyl-accepting chemotaxis sensory transducer  40.24 
 
 
572 aa  178  1e-43  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.696609  normal  0.585687 
 
 
-
 
NC_007643  Rru_A2366  methyl-accepting chemotaxis sensory transducer  40.31 
 
 
560 aa  178  2e-43  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.196109  n/a   
 
 
-
 
NC_007958  RPD_1918  chemotaxis sensory transducer  40.06 
 
 
688 aa  178  2e-43  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.537222 
 
 
-
 
NC_007925  RPC_4407  methyl-accepting chemotaxis sensory transducer  39.76 
 
 
566 aa  176  5e-43  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.365939 
 
 
-
 
NC_007958  RPD_1857  chemotaxis sensory transducer  37.57 
 
 
563 aa  176  5e-43  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A2484  chemotaxis sensory transducer  44.26 
 
 
563 aa  176  6e-43  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.1562  n/a   
 
 
-
 
NC_009485  BBta_0330  putative methyl-accepting chemotaxis receptor/sensory transducer  42.2 
 
 
676 aa  175  9.999999999999999e-43  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0869057 
 
 
-
 
NC_007958  RPD_0994  chemotaxis sensory transducer  41.69 
 
 
656 aa  175  9.999999999999999e-43  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.357708  normal 
 
 
-
 
NC_007958  RPD_0995  chemotaxis sensory transducer  37.17 
 
 
656 aa  175  9.999999999999999e-43  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.880627  normal 
 
 
-
 
NC_009485  BBta_6993  putative methyl-accepting chemotaxis receptor/sensory transducer  37.43 
 
 
697 aa  175  9.999999999999999e-43  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A0718  chemotaxis sensory transducer  53.97 
 
 
669 aa  175  1.9999999999999998e-42  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.845917  n/a   
 
 
-
 
NC_007964  Nham_1080  methyl-accepting chemotaxis sensory transducer  38.26 
 
 
698 aa  174  1.9999999999999998e-42  Nitrobacter hamburgensis X14  Bacteria  normal  0.0139762  n/a   
 
 
-
 
NC_011757  Mchl_0134  methyl-accepting chemotaxis sensory transducer  45.32 
 
 
565 aa  174  2.9999999999999996e-42  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.150747 
 
 
-
 
NC_011004  Rpal_1830  methyl-accepting chemotaxis sensory transducer  37.84 
 
 
563 aa  174  2.9999999999999996e-42  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_3610  methyl-accepting chemotaxis sensory transducer  36.27 
 
 
563 aa  174  2.9999999999999996e-42  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.735593  normal  0.400148 
 
 
-
 
NC_010725  Mpop_0581  methyl-accepting chemotaxis sensory transducer  37.98 
 
 
562 aa  174  2.9999999999999996e-42  Methylobacterium populi BJ001  Bacteria  normal  0.0281709  decreased coverage  0.00474558 
 
 
-
 
NC_010172  Mext_0820  chemotaxis sensory transducer  41.9 
 
 
608 aa  174  2.9999999999999996e-42  Methylobacterium extorquens PA1  Bacteria  normal  0.254614  normal  0.216431 
 
 
-
 
NC_011757  Mchl_1427  methyl-accepting chemotaxis sensory transducer  38.8 
 
 
562 aa  174  2.9999999999999996e-42  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.309452  normal 
 
 
-
 
NC_007964  Nham_1045  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  42.91 
 
 
564 aa  174  2.9999999999999996e-42  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_0191  chemotaxis sensory transducer  47.45 
 
 
565 aa  173  3.9999999999999995e-42  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.731843 
 
 
-
 
NC_009485  BBta_7508  putative methyl-accepting chemotaxis protein (with a HAMP region)  40.78 
 
 
552 aa  173  3.9999999999999995e-42  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.692825  normal 
 
 
-
 
NC_007778  RPB_2358  methyl-accepting chemotaxis sensory transducer  36.95 
 
 
673 aa  174  3.9999999999999995e-42  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.207811 
 
 
-
 
NC_011004  Rpal_2757  methyl-accepting chemotaxis sensory transducer  38.42 
 
 
561 aa  174  3.9999999999999995e-42  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0630329  n/a   
 
 
-
 
NC_007958  RPD_0153  chemotaxis sensory transducer  38.38 
 
 
602 aa  173  3.9999999999999995e-42  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_3471  methyl-accepting chemotaxis sensory transducer  38.19 
 
 
561 aa  173  3.9999999999999995e-42  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.130295  normal 
 
 
-
 
NC_010725  Mpop_1216  methyl-accepting chemotaxis sensory transducer  38.25 
 
 
562 aa  173  5e-42  Methylobacterium populi BJ001  Bacteria  normal  0.743011  normal  0.567814 
 
 
-
 
NC_007925  RPC_2742  methyl-accepting chemotaxis sensory transducer  44.06 
 
 
560 aa  172  9e-42  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.429688 
 
 
-
 
NC_011757  Mchl_0779  methyl-accepting chemotaxis sensory transducer with Cache sensor  46.03 
 
 
558 aa  172  9e-42  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0546434  normal  0.151916 
 
 
-
 
NC_007925  RPC_4406  methyl-accepting chemotaxis sensory transducer  43.45 
 
 
566 aa  172  9e-42  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.341232 
 
 
-
 
NC_007778  RPB_1321  methyl-accepting chemotaxis sensory transducer  39.07 
 
 
730 aa  172  1e-41  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0177086  normal  0.260794 
 
 
-
 
NC_007778  RPB_3545  methyl-accepting chemotaxis sensory transducer  40 
 
 
689 aa  172  1e-41  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.457552  normal  0.598514 
 
 
-
 
NC_010725  Mpop_3344  methyl-accepting chemotaxis sensory transducer  38.19 
 
 
561 aa  172  1e-41  Methylobacterium populi BJ001  Bacteria  normal  0.828703  normal 
 
 
-
 
NC_011757  Mchl_3907  methyl-accepting chemotaxis sensory transducer  45.1 
 
 
565 aa  171  2e-41  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_3147  chemotaxis sensory transducer  37.9 
 
 
561 aa  171  2e-41  Methylobacterium extorquens PA1  Bacteria  normal  0.0908078  normal 
 
 
-
 
NC_010172  Mext_1266  chemotaxis sensory transducer  38.52 
 
 
562 aa  171  2e-41  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>