More than 300 homologs were found in PanDaTox collection
for query gene Sked_19740 on replicon NC_013521
Organism: Sanguibacter keddieii DSM 10542



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013521  Sked_19740  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  100 
 
 
216 aa  419  1e-116  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.682926  normal 
 
 
-
 
NC_013093  Amir_6405  two component transcriptional regulator, LuxR family  53.92 
 
 
225 aa  206  2e-52  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_3387  two component transcriptional regulator, LuxR family  50.93 
 
 
223 aa  204  7e-52  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.0000386408  hitchhiker  0.000570848 
 
 
-
 
NC_009664  Krad_2537  two component transcriptional regulator, LuxR family  49.34 
 
 
242 aa  201  7e-51  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_2015  two component transcriptional regulator, LuxR family  49.55 
 
 
232 aa  197  9e-50  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.706703  n/a   
 
 
-
 
NC_009921  Franean1_4684  two component LuxR family transcriptional regulator  49.3 
 
 
223 aa  197  1.0000000000000001e-49  Frankia sp. EAN1pec  Bacteria  normal  0.51425  normal 
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  48.85 
 
 
222 aa  194  6e-49  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  48.15 
 
 
224 aa  193  2e-48  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_013521  Sked_36930  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  49.77 
 
 
222 aa  192  2e-48  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.811978 
 
 
-
 
NC_012669  Bcav_4002  two component transcriptional regulator, LuxR family  49.77 
 
 
222 aa  193  2e-48  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.947887  normal  0.770727 
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  48.61 
 
 
222 aa  192  4e-48  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal 
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  50 
 
 
221 aa  192  4e-48  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_012669  Bcav_1731  two component transcriptional regulator, LuxR family  48.15 
 
 
224 aa  191  6e-48  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.550315  normal 
 
 
-
 
NC_013595  Sros_5619  response regulator receiver protein  48.15 
 
 
226 aa  191  9e-48  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0556461  normal  0.802866 
 
 
-
 
NC_013093  Amir_4511  two component transcriptional regulator, LuxR family  50.93 
 
 
226 aa  189  2e-47  Actinosynnema mirum DSM 43827  Bacteria  normal  0.11054  n/a   
 
 
-
 
NC_013530  Xcel_1618  two component transcriptional regulator, LuxR family  48.15 
 
 
220 aa  189  2.9999999999999997e-47  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_2658  two component transcriptional regulator, LuxR family  49.53 
 
 
215 aa  189  2.9999999999999997e-47  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_8243  response regulator receiver protein  50 
 
 
217 aa  188  5e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  0.931194  normal  0.230681 
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  49.31 
 
 
217 aa  188  5e-47  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000794288  unclonable  0.0000000332591 
 
 
-
 
NC_013131  Caci_3748  two component transcriptional regulator, LuxR family  48.39 
 
 
236 aa  187  1e-46  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_1951  two component transcriptional regulator, LuxR family  45.83 
 
 
226 aa  186  2e-46  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0924411 
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  46.26 
 
 
225 aa  185  5e-46  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  49.77 
 
 
225 aa  185  5e-46  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_007333  Tfu_0767  LuxR response regulator receiver  47.22 
 
 
221 aa  184  1.0000000000000001e-45  Thermobifida fusca YX  Bacteria  normal  0.88397  n/a   
 
 
-
 
NC_009664  Krad_2599  two component transcriptional regulator, LuxR family  48.84 
 
 
211 aa  182  4.0000000000000006e-45  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  48.2 
 
 
226 aa  182  4.0000000000000006e-45  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_4662  two component transcriptional regulator, LuxR family  46.3 
 
 
221 aa  182  4.0000000000000006e-45  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.142047  hitchhiker  0.00679998 
 
 
-
 
NC_014210  Ndas_2087  two component transcriptional regulator, LuxR family  47.22 
 
 
247 aa  182  4.0000000000000006e-45  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.73112  normal 
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  45.91 
 
 
225 aa  182  5.0000000000000004e-45  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  47.95 
 
 
226 aa  181  9.000000000000001e-45  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_013131  Caci_7160  two component transcriptional regulator, LuxR family  46.76 
 
 
224 aa  180  1e-44  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  46.3 
 
 
215 aa  180  1e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_013947  Snas_0645  two component transcriptional regulator, LuxR family  47.22 
 
 
220 aa  180  2e-44  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.691779  normal 
 
 
-
 
NC_013131  Caci_7415  two component transcriptional regulator, LuxR family  45.62 
 
 
228 aa  180  2e-44  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.933403  normal 
 
 
-
 
NC_013595  Sros_3251  response regulator receiver protein  43.98 
 
 
221 aa  179  2.9999999999999997e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0793449  normal 
 
 
-
 
NC_013739  Cwoe_4937  two component transcriptional regulator, LuxR family  47.93 
 
 
224 aa  179  2.9999999999999997e-44  Conexibacter woesei DSM 14684  Bacteria  normal  0.570807  normal  0.210467 
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  46.54 
 
 
221 aa  179  4e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal 
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  49.77 
 
 
225 aa  178  4e-44  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  47.69 
 
 
218 aa  178  4.999999999999999e-44  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  47.69 
 
 
234 aa  178  4.999999999999999e-44  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  46.3 
 
 
218 aa  177  1e-43  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  47.22 
 
 
219 aa  177  1e-43  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_013204  Elen_2822  two component transcriptional regulator, LuxR family  47.47 
 
 
228 aa  176  2e-43  Eggerthella lenta DSM 2243  Bacteria  normal  0.0415698  normal  0.590713 
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  51.15 
 
 
221 aa  177  2e-43  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal 
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  45.37 
 
 
220 aa  176  2e-43  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_3359  two component transcriptional regulator, LuxR family  46.98 
 
 
219 aa  176  3e-43  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0172663  normal 
 
 
-
 
NC_014151  Cfla_0278  two component transcriptional regulator, LuxR family  49.54 
 
 
225 aa  176  3e-43  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.000789071 
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  46.85 
 
 
223 aa  176  4e-43  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal 
 
 
-
 
NC_012669  Bcav_1049  two component transcriptional regulator, LuxR family  46.58 
 
 
222 aa  175  4e-43  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.661499  normal  0.245945 
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  48.39 
 
 
227 aa  174  6e-43  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_013947  Snas_4575  two component transcriptional regulator, LuxR family  48.15 
 
 
224 aa  174  8e-43  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.703378  normal  0.112036 
 
 
-
 
NC_013131  Caci_7843  two component transcriptional regulator, LuxR family  43.72 
 
 
231 aa  174  9.999999999999999e-43  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.176081 
 
 
-
 
NC_013170  Ccur_01320  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  47 
 
 
261 aa  173  9.999999999999999e-43  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  45.37 
 
 
225 aa  173  1.9999999999999998e-42  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_013739  Cwoe_4855  two component transcriptional regulator, LuxR family  45.54 
 
 
244 aa  173  1.9999999999999998e-42  Conexibacter woesei DSM 14684  Bacteria  normal  0.093919  normal 
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  46.76 
 
 
219 aa  172  1.9999999999999998e-42  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  48.85 
 
 
241 aa  172  2.9999999999999996e-42  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_009664  Krad_1350  two component transcriptional regulator, LuxR family  48.21 
 
 
249 aa  172  2.9999999999999996e-42  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.691965  normal 
 
 
-
 
NC_009921  Franean1_7117  two component LuxR family transcriptional regulator  43.72 
 
 
214 aa  172  2.9999999999999996e-42  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_2458  response regulator receiver  46.76 
 
 
220 aa  172  3.9999999999999995e-42  Salinispora tropica CNB-440  Bacteria  normal  0.0554598  normal 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  46.12 
 
 
226 aa  172  3.9999999999999995e-42  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_013595  Sros_2533  response regulator receiver protein  43.98 
 
 
220 aa  172  3.9999999999999995e-42  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.495874 
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  46.79 
 
 
221 aa  172  5e-42  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_0262  two component transcriptional regulator, LuxR family  47.69 
 
 
225 aa  171  5.999999999999999e-42  Conexibacter woesei DSM 14684  Bacteria  normal  0.0721339  normal  0.623073 
 
 
-
 
NC_013093  Amir_4260  two component transcriptional regulator, LuxR family  49.07 
 
 
217 aa  171  5.999999999999999e-42  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_1740  two component transcriptional regulator, LuxR family  44.91 
 
 
228 aa  171  6.999999999999999e-42  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_3998  response regulator receiver protein  49.31 
 
 
233 aa  171  6.999999999999999e-42  Streptosporangium roseum DSM 43021  Bacteria  normal  0.363745  normal  0.263649 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  46.49 
 
 
229 aa  171  7.999999999999999e-42  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_1981  two component transcriptional regulator, LuxR family  46.12 
 
 
230 aa  171  1e-41  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  47.22 
 
 
215 aa  170  2e-41  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  46.36 
 
 
227 aa  170  2e-41  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_2225  two component transcriptional regulator, LuxR family  49.76 
 
 
209 aa  170  2e-41  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_4119  response regulator receiver  42.59 
 
 
230 aa  169  2e-41  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  42.79 
 
 
221 aa  169  3e-41  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_009921  Franean1_3390  two component LuxR family transcriptional regulator  43.52 
 
 
226 aa  168  5e-41  Frankia sp. EAN1pec  Bacteria  normal  0.0389848  normal 
 
 
-
 
NC_013441  Gbro_3238  regulatory protein LuxR  44.93 
 
 
228 aa  168  7e-41  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  46.12 
 
 
230 aa  168  7e-41  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.455968 
 
 
-
 
NC_013595  Sros_5499  response regulator receiver protein  46.76 
 
 
213 aa  167  8e-41  Streptosporangium roseum DSM 43021  Bacteria  decreased coverage  0.00659712  normal  0.108677 
 
 
-
 
NC_012803  Mlut_21900  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  46.79 
 
 
230 aa  167  9e-41  Micrococcus luteus NCTC 2665  Bacteria  hitchhiker  0.00486265  n/a   
 
 
-
 
NC_013131  Caci_6049  two component transcriptional regulator, LuxR family  45.12 
 
 
224 aa  167  9e-41  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.764436  normal 
 
 
-
 
NC_013131  Caci_6705  two component transcriptional regulator, LuxR family  42.68 
 
 
258 aa  167  1e-40  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.318103  normal  0.0731204 
 
 
-
 
NC_014151  Cfla_2842  two component transcriptional regulator, LuxR family  45.81 
 
 
226 aa  167  1e-40  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.622781  decreased coverage  0.00305681 
 
 
-
 
NC_013131  Caci_0683  two component transcriptional regulator, LuxR family  44.69 
 
 
234 aa  167  1e-40  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.344925  normal 
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  42.66 
 
 
241 aa  167  1e-40  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_013530  Xcel_2601  two component transcriptional regulator, LuxR family  45.45 
 
 
234 aa  167  1e-40  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.1212  n/a   
 
 
-
 
NC_013131  Caci_2656  two component transcriptional regulator, LuxR family  42.79 
 
 
226 aa  166  2e-40  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.161573  normal 
 
 
-
 
NC_014211  Ndas_4872  two component transcriptional regulator, LuxR family  46.26 
 
 
232 aa  167  2e-40  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.247388  normal 
 
 
-
 
NC_013093  Amir_2232  two component transcriptional regulator, LuxR family  45.83 
 
 
302 aa  166  2.9999999999999998e-40  Actinosynnema mirum DSM 43827  Bacteria  normal  0.501029  n/a   
 
 
-
 
NC_013739  Cwoe_0549  two component transcriptional regulator, LuxR family  45.83 
 
 
220 aa  166  2.9999999999999998e-40  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_3912  two component transcriptional regulator, LuxR family  44.24 
 
 
230 aa  166  2.9999999999999998e-40  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_012669  Bcav_2710  two component transcriptional regulator, LuxR family  48.17 
 
 
230 aa  166  2.9999999999999998e-40  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.248821  normal  0.606697 
 
 
-
 
NC_013595  Sros_4577  response regulator receiver protein  40.91 
 
 
223 aa  166  2.9999999999999998e-40  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.172592 
 
 
-
 
NC_013172  Bfae_11600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  47.93 
 
 
225 aa  166  2.9999999999999998e-40  Brachybacterium faecium DSM 4810  Bacteria  decreased coverage  0.00120804  n/a   
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  45.79 
 
 
220 aa  166  2.9999999999999998e-40  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  44.55 
 
 
227 aa  165  4e-40  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  45.66 
 
 
225 aa  165  4e-40  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal 
 
 
-
 
NC_013131  Caci_7658  two component transcriptional regulator, LuxR family  45.37 
 
 
219 aa  165  4e-40  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_4491  two component transcriptional regulator, LuxR family  44.44 
 
 
225 aa  165  5e-40  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_2469  two component transcriptional regulator, LuxR family  45.62 
 
 
214 aa  165  5e-40  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.126163  normal 
 
 
-
 
NC_014210  Ndas_4652  two component transcriptional regulator, LuxR family  46.54 
 
 
219 aa  165  5e-40  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0949639  normal 
 
 
-
 
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