More than 300 homologs were found in PanDaTox collection
for query gene Shewmr7_3588 on replicon NC_008322
Organism: Shewanella sp. MR-7



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008322  Shewmr7_3588  short chain dehydrogenase  100 
 
 
267 aa  543  1e-153  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_0441  short chain dehydrogenase  99.25 
 
 
267 aa  540  9.999999999999999e-153  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_0437  short chain dehydrogenase  98.5 
 
 
267 aa  535  1e-151  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_0438  short chain dehydrogenase  95.88 
 
 
267 aa  526  1e-148  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009997  Sbal195_4040  short chain dehydrogenase  91.76 
 
 
267 aa  504  9.999999999999999e-143  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_3844  short chain dehydrogenase  91.76 
 
 
267 aa  504  9.999999999999999e-143  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.000447473 
 
 
-
 
NC_009052  Sbal_0416  short chain dehydrogenase  91.76 
 
 
267 aa  504  9.999999999999999e-143  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_3918  short chain dehydrogenase  91.39 
 
 
267 aa  502  1e-141  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_3404  short chain dehydrogenase  88.76 
 
 
267 aa  494  1e-139  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_0293  short chain dehydrogenase  71.43 
 
 
267 aa  410  1e-114  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_0429  short chain dehydrogenase  72.66 
 
 
267 aa  408  1e-113  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_3415  short chain dehydrogenase  75 
 
 
268 aa  406  1.0000000000000001e-112  Shewanella loihica PV-4  Bacteria  normal  0.560569  normal 
 
 
-
 
NC_008700  Sama_0389  short chain dehydrogenase  70.37 
 
 
270 aa  385  1e-106  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_3968  short chain dehydrogenase  48.22 
 
 
269 aa  253  3e-66  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0231224  normal  0.018096 
 
 
-
 
NC_011884  Cyan7425_1902  short chain dehydrogenase  44.87 
 
 
269 aa  239  5e-62  Cyanothece sp. PCC 7425  Bacteria  normal  0.0327948  normal 
 
 
-
 
NC_007948  Bpro_3168  short chain dehydrogenase  43.13 
 
 
270 aa  222  6e-57  Polaromonas sp. JS666  Bacteria  normal  0.273274  normal  0.685188 
 
 
-
 
NC_007347  Reut_A1414  short chain dehydrogenase  41.89 
 
 
270 aa  203  3e-51  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_1686  short-chain dehydrogenase/reductase SDR  40.15 
 
 
269 aa  203  3e-51  Spirosoma linguale DSM 74  Bacteria  normal  0.292744  normal 
 
 
-
 
NC_009668  Oant_2951  short chain dehydrogenase  40.23 
 
 
276 aa  194  1e-48  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_013061  Phep_3027  short-chain dehydrogenase/reductase SDR  39 
 
 
272 aa  189  2.9999999999999997e-47  Pedobacter heparinus DSM 2366  Bacteria  normal  hitchhiker  0.00333155 
 
 
-
 
NC_013132  Cpin_4665  short-chain dehydrogenase/reductase SDR  38.34 
 
 
266 aa  184  9e-46  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.871012  hitchhiker  0.000000000383418 
 
 
-
 
NC_011693  PHATRDRAFT_16295  predicted protein  42.61 
 
 
237 aa  179  4e-44  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.0303319  n/a   
 
 
-
 
NC_013037  Dfer_2713  short-chain dehydrogenase/reductase SDR  37.36 
 
 
266 aa  167  2e-40  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_3735  short chain dehydrogenase  35.57 
 
 
281 aa  154  2e-36  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_12680  short chain dehydrogenase  36.08 
 
 
278 aa  149  4e-35  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_6402  short-chain dehydrogenase/reductase SDR  33.46 
 
 
277 aa  149  7e-35  Chitinophaga pinensis DSM 2588  Bacteria  hitchhiker  0.000182624  normal 
 
 
-
 
NC_010571  Oter_1684  short-chain dehydrogenase/reductase SDR  38.72 
 
 
263 aa  148  8e-35  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_011658  BCAH187_A4268  oxidoreductase, short-chain dehydrogenase/reductase family  35.66 
 
 
264 aa  147  2.0000000000000003e-34  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS4042  short chain dehydrogenase/reductase family oxidoreductase  35.66 
 
 
264 aa  147  2.0000000000000003e-34  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_4357  short chain dehydrogenase/reductase family oxidoreductase  35.66 
 
 
264 aa  147  2.0000000000000003e-34  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_0208  short-chain dehydrogenase/reductase SDR  36.72 
 
 
263 aa  146  3e-34  Spirosoma linguale DSM 74  Bacteria  normal  0.196422  normal 
 
 
-
 
NC_003909  BCE_4205  short chain dehydrogenase/reductase family oxidoreductase  35.29 
 
 
264 aa  144  1e-33  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_3881  oxidoreductase, short-chain dehydrogenase/reductase  34.56 
 
 
264 aa  145  1e-33  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_4158  oxidoreductase, short-chain dehydrogenase/reductase family  34.56 
 
 
264 aa  145  1e-33  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_006274  BCZK3889  short chain dehydrogenase/reductase family oxidoreductase  35.66 
 
 
264 aa  144  2e-33  Bacillus cereus E33L  Bacteria  normal  0.674087  n/a   
 
 
-
 
NC_010184  BcerKBAB4_3967  short-chain dehydrogenase/reductase SDR  35.53 
 
 
264 aa  144  2e-33  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0321162  n/a   
 
 
-
 
NC_011725  BCB4264_A4244  oxidoreductase, short-chain dehydrogenase/reductase family  34.19 
 
 
264 aa  139  6e-32  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B0992  oxidoreductase, short-chain dehydrogenase/reductase family  34.19 
 
 
264 aa  139  7e-32  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_013061  Phep_0379  short-chain dehydrogenase/reductase SDR  30.8 
 
 
262 aa  137  2e-31  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_3000  short-chain dehydrogenase/reductase SDR  41.67 
 
 
241 aa  136  3.0000000000000003e-31  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1826  3-ketoacyl-(acyl-carrier-protein) reductase  36.44 
 
 
239 aa  135  5e-31  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A1964  3-ketoacyl-(acyl-carrier-protein) reductase  36.44 
 
 
239 aa  135  7.000000000000001e-31  Bacillus cereus B4264  Bacteria  normal  0.130885  n/a   
 
 
-
 
NC_011773  BCAH820_1995  3-ketoacyl-(acyl-carrier-protein) reductase  36.44 
 
 
239 aa  135  7.000000000000001e-31  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  5.591310000000001e-44 
 
 
-
 
NC_011658  BCAH187_A2065  3-ketoacyl-(acyl-carrier-protein) reductase  36.44 
 
 
239 aa  135  7.000000000000001e-31  Bacillus cereus AH187  Bacteria  hitchhiker  0.00000861938  n/a   
 
 
-
 
NC_011772  BCG9842_B3364  3-ketoacyl-(acyl-carrier-protein) reductase  36.44 
 
 
239 aa  135  7.000000000000001e-31  Bacillus cereus G9842  Bacteria  normal  0.115947  hitchhiker  0.00000000000000894376 
 
 
-
 
NC_003909  BCE_2044  3-ketoacyl-(acyl-carrier-protein) reductase  36.44 
 
 
242 aa  135  8e-31  Bacillus cereus ATCC 10987  Bacteria  normal  0.252391  n/a   
 
 
-
 
NC_005945  BAS1819  3-ketoacyl-(acyl-carrier-protein) reductase  36.44 
 
 
242 aa  135  8e-31  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_1793  3-ketoacyl-(acyl-carrier-protein) reductase  36.44 
 
 
242 aa  135  8e-31  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.512815  n/a   
 
 
-
 
NC_006274  BCZK1775  3-ketoacyl-(acyl-carrier-protein) reductase  36.44 
 
 
242 aa  135  8e-31  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_1958  3-ketoacyl-(acyl-carrier-protein) reductase  36.44 
 
 
242 aa  135  8e-31  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_2831  short-chain dehydrogenase/reductase SDR  33.46 
 
 
264 aa  134  1.9999999999999998e-30  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_1494  3-ketoacyl-(acyl-carrier-protein) reductase  35.59 
 
 
239 aa  133  3e-30  Bacillus cytotoxicus NVH 391-98  Bacteria  hitchhiker  0.000128809  n/a   
 
 
-
 
NC_009441  Fjoh_5037  3-ketoacyl-(acyl-carrier-protein) reductase  32.49 
 
 
238 aa  132  6e-30  Flavobacterium johnsoniae UW101  Bacteria  normal  0.293143  n/a   
 
 
-
 
NC_010338  Caul_0159  short-chain dehydrogenase/reductase SDR  35.27 
 
 
249 aa  131  1.0000000000000001e-29  Caulobacter sp. K31  Bacteria  normal  0.410897  normal  0.168063 
 
 
-
 
NC_008025  Dgeo_0458  short-chain dehydrogenase/reductase SDR  37.74 
 
 
257 aa  129  3e-29  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.706164 
 
 
-
 
NC_011729  PCC7424_0488  short-chain dehydrogenase/reductase SDR  36.84 
 
 
261 aa  129  5.0000000000000004e-29  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_007413  Ava_0943  Short-chain dehydrogenase/reductase SDR  38.86 
 
 
293 aa  128  8.000000000000001e-29  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_1067  short-chain dehydrogenase/reductase SDR  39.46 
 
 
258 aa  128  8.000000000000001e-29  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_010085  Nmar_0044  short-chain dehydrogenase/reductase SDR  31.82 
 
 
264 aa  127  2.0000000000000002e-28  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal 
 
 
-
 
NC_007974  Rmet_5847  short-chain dehydrogenase/reductase SDR  35.71 
 
 
281 aa  127  2.0000000000000002e-28  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_1014  short-chain dehydrogenase/reductase SDR  35.41 
 
 
336 aa  127  2.0000000000000002e-28  Methylobacterium extorquens PA1  Bacteria  normal  0.264982  normal 
 
 
-
 
NC_013061  Phep_4049  3-ketoacyl-(acyl-carrier-protein) reductase  37.75 
 
 
238 aa  126  3e-28  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_012793  GWCH70_1081  3-ketoacyl-(acyl-carrier-protein) reductase  35.57 
 
 
246 aa  125  6e-28  Geobacillus sp. WCH70  Bacteria  normal  0.46401  n/a   
 
 
-
 
NC_011757  Mchl_0762  short-chain dehydrogenase/reductase SDR  35.02 
 
 
336 aa  125  7e-28  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_1326  short-chain dehydrogenase/reductase SDR  35.41 
 
 
336 aa  124  1e-27  Methylobacterium populi BJ001  Bacteria  normal  0.945072  normal  0.131603 
 
 
-
 
NC_007614  Nmul_A1489  short chain dehydrogenase  32.95 
 
 
296 aa  124  2e-27  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_1337  3-ketoacyl-(acyl-carrier-protein) reductase  33.63 
 
 
238 aa  124  2e-27  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.541378  normal 
 
 
-
 
NC_009674  Bcer98_1043  acetoacetyl-CoA reductase  37.11 
 
 
247 aa  124  2e-27  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.8589  n/a   
 
 
-
 
NC_010515  Bcenmc03_3856  short-chain dehydrogenase/reductase SDR  33.96 
 
 
300 aa  122  6e-27  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.514987 
 
 
-
 
NC_009767  Rcas_3066  short-chain dehydrogenase/reductase SDR  38.66 
 
 
273 aa  122  6e-27  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.172953  normal 
 
 
-
 
NC_013743  Htur_2906  short-chain dehydrogenase/reductase SDR  38.95 
 
 
258 aa  122  8e-27  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_013501  Rmar_2639  short-chain dehydrogenase/reductase SDR  35.77 
 
 
238 aa  122  8e-27  Rhodothermus marinus DSM 4252  Bacteria  normal  0.37123  n/a   
 
 
-
 
NC_008312  Tery_3453  short-chain dehydrogenase/reductase SDR  35.98 
 
 
267 aa  121  9.999999999999999e-27  Trichodesmium erythraeum IMS101  Bacteria  normal  0.282255  normal 
 
 
-
 
NC_007355  Mbar_A2512  3-oxoacyl-(acyl-carrier protein) reductase  35.42 
 
 
236 aa  120  1.9999999999999998e-26  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.0588198  normal  0.237046 
 
 
-
 
NC_011679  PHATR_36881  2-deoxy-D-gluconate 3-dehydrogenase  31.7 
 
 
308 aa  120  1.9999999999999998e-26  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.804236  n/a   
 
 
-
 
NC_008009  Acid345_0265  3-oxoacyl-[acyl-carrier-protein] reductase  31.45 
 
 
248 aa  120  1.9999999999999998e-26  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.534726  normal 
 
 
-
 
NC_009523  RoseRS_1352  short-chain dehydrogenase/reductase SDR  32.28 
 
 
272 aa  120  3e-26  Roseiflexus sp. RS-1  Bacteria  normal  0.15703  normal 
 
 
-
 
NC_008061  Bcen_4697  short-chain dehydrogenase/reductase SDR  33.58 
 
 
300 aa  120  3e-26  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.858083  n/a   
 
 
-
 
NC_008543  Bcen2424_3665  short-chain dehydrogenase/reductase SDR  33.58 
 
 
300 aa  120  3e-26  Burkholderia cenocepacia HI2424  Bacteria  normal  0.196954  normal 
 
 
-
 
NC_011884  Cyan7425_0579  short chain dehydrogenase  30.86 
 
 
336 aa  119  3.9999999999999996e-26  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_0904  Short-chain dehydrogenase/reductase SDR  37.06 
 
 
254 aa  119  3.9999999999999996e-26  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B2443  Short-chain dehydrogenase/reductase SDR  33.21 
 
 
300 aa  119  3.9999999999999996e-26  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_012793  GWCH70_2271  short-chain dehydrogenase/reductase SDR  30.53 
 
 
262 aa  119  4.9999999999999996e-26  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_2621  short-chain dehydrogenase/reductase SDR  35.06 
 
 
295 aa  119  6e-26  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.786359 
 
 
-
 
NC_012791  Vapar_0808  short-chain dehydrogenase/reductase SDR  35.24 
 
 
252 aa  119  6e-26  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_0559  short-chain dehydrogenase/reductase SDR  32.45 
 
 
308 aa  118  7.999999999999999e-26  Burkholderia mallei NCTC 10229  Bacteria  normal  0.0827865  n/a   
 
 
-
 
NC_009075  BURPS668_A1346  short chain dehydrogenase/reductase family oxidoreductase  32.45 
 
 
308 aa  118  7.999999999999999e-26  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A2524  short chain dehydrogenase  32.45 
 
 
308 aa  118  7.999999999999999e-26  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1269  short chain dehydrogenase/reductase family oxidoreductase  32.45 
 
 
308 aa  118  7.999999999999999e-26  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A1008  short chain dehydrogenase  32.45 
 
 
308 aa  118  7.999999999999999e-26  Burkholderia mallei NCTC 10247  Bacteria  normal  0.388516  n/a   
 
 
-
 
NC_013730  Slin_2186  short-chain dehydrogenase/reductase SDR  34.9 
 
 
248 aa  118  9e-26  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.0361624 
 
 
-
 
NC_009943  Dole_2754  short-chain dehydrogenase/reductase SDR  33.08 
 
 
275 aa  118  9.999999999999999e-26  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.433019  n/a   
 
 
-
 
NC_013411  GYMC61_0353  short-chain dehydrogenase/reductase SDR  34.32 
 
 
262 aa  118  9.999999999999999e-26  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010086  Bmul_5043  short-chain dehydrogenase/reductase SDR  33.2 
 
 
300 aa  118  9.999999999999999e-26  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.680577 
 
 
-
 
NC_003909  BCE_1429  acetoacetyl-CoA reductase  34.55 
 
 
247 aa  117  1.9999999999999998e-25  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK1209  acetoacetyl-CoA reductase  34.55 
 
 
247 aa  117  1.9999999999999998e-25  Bacillus cereus E33L  Bacteria  decreased coverage  0.00888886  n/a   
 
 
-
 
NC_011658  BCAH187_A1470  acetoacetyl-CoA reductase  34.55 
 
 
247 aa  117  1.9999999999999998e-25  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_1405  acetoacetyl-CoA reductase  34.55 
 
 
247 aa  117  1.9999999999999998e-25  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_007530  GBAA_1330  acetoacetyl-CoA reductase  34.55 
 
 
247 aa  117  1.9999999999999998e-25  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B3976  acetoacetyl-CoA reductase  34.55 
 
 
247 aa  117  1.9999999999999998e-25  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
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