13 homologs were found in PanDaTox collection
for query gene Shewmr7_2859 on replicon NC_008322
Organism: Shewanella sp. MR-7



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008322  Shewmr7_2859  hypothetical protein  100 
 
 
317 aa  660  Shewanella sp. MR-7  Bacteria  normal  normal  0.540816 
 
 
-
 
NC_011138  MADE_01487  hypothetical protein  32.79 
 
 
355 aa  126  5e-28  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.61135  n/a   
 
 
-
 
NC_009783  VIBHAR_01110  hypothetical protein  32.88 
 
 
362 aa  120  3e-26  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009438  Sputcn32_0235  hypothetical protein  29.77 
 
 
301 aa  117  4e-25  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008573  Shewana3_4379  hypothetical protein  30.1 
 
 
301 aa  105  1e-21  Shewanella sp. ANA-3  Bacteria  normal  normal  0.242099 
 
 
-
 
NC_011662  Tmz1t_0013  hypothetical protein  29.44 
 
 
257 aa  60.5  4e-08  Thauera sp. MZ1T  Bacteria  normal  0.652792  n/a   
 
 
-
 
NC_008738  Maqu_4319  hypothetical protein  33.73 
 
 
584 aa  56.6  5e-07  Marinobacter aquaeolei VT8  Bacteria  n/a    n/a   
 
 
-
 
NC_010511  M446_5541  hypothetical protein  35.23 
 
 
378 aa  52.4  9e-06  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_1300  hypothetical protein  29 
 
 
426 aa  52.4  1e-05  Marinobacter aquaeolei VT8  Bacteria  normal  0.061722  n/a   
 
 
-
 
NC_010172  Mext_0085  hypothetical protein  36.36 
 
 
387 aa  51.6  2e-05  Methylobacterium extorquens PA1  Bacteria  normal  0.56108  normal 
 
 
-
 
NC_010172  Mext_0167  hypothetical protein  36.36 
 
 
387 aa  51.2  2e-05  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_007969  Pcryo_1614  hypothetical protein  40.54 
 
 
298 aa  48.9  0.0001  Psychrobacter cryohalolentis K5  Bacteria  normal  normal  0.0225237 
 
 
-
 
NC_011757  Mchl_0078  hypothetical protein  44.23 
 
 
399 aa  48.1  0.0002  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.698048  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>