More than 300 homologs were found in PanDaTox collection
for query gene Shewmr4_2995 on replicon NC_008321
Organism: Shewanella sp. MR-4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008700  Sama_2607  putative methyl-accepting chemotaxis sensory transducer  63.22 
 
 
541 aa  665    Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.00122932  normal 
 
 
-
 
NC_009665  Shew185_1084  methyl-accepting chemotaxis sensory transducer  85.4 
 
 
541 aa  862    Shewanella baltica OS185  Bacteria  hitchhiker  0.000100295  n/a   
 
 
-
 
NC_011663  Sbal223_3274  methyl-accepting chemotaxis sensory transducer  85.4 
 
 
541 aa  862    Shewanella baltica OS223  Bacteria  normal  0.0175031  normal  0.083895 
 
 
-
 
NC_009831  Ssed_3705  methyl-accepting chemotaxis sensory transducer  67.28 
 
 
541 aa  695    Shewanella sediminis HAW-EB3  Bacteria  normal  0.0963791  normal 
 
 
-
 
NC_009438  Sputcn32_1020  methyl-accepting chemotaxis sensory transducer  85.21 
 
 
541 aa  862    Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.00762848  n/a   
 
 
-
 
NC_004347  SO_3582  methyl-accepting chemotaxis protein  82.99 
 
 
541 aa  863    Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_010506  Swoo_0808  methyl-accepting chemotaxis sensory transducer  64.33 
 
 
541 aa  662    Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_3173  methyl-accepting chemotaxis sensory transducer  94.64 
 
 
541 aa  967    Shewanella sp. ANA-3  Bacteria  normal  0.0131988  normal 
 
 
-
 
NC_009092  Shew_2952  methyl-accepting chemotaxis sensory transducer  66.36 
 
 
541 aa  674    Shewanella loihica PV-4  Bacteria  hitchhiker  0.000751538  normal 
 
 
-
 
NC_009052  Sbal_1015  methyl-accepting chemotaxis sensory transducer  85.21 
 
 
541 aa  860    Shewanella baltica OS155  Bacteria  unclonable  0.0000000434326  n/a   
 
 
-
 
NC_009997  Sbal195_1117  methyl-accepting chemotaxis sensory transducer  85.4 
 
 
541 aa  862    Shewanella baltica OS195  Bacteria  normal  0.0100073  normal  0.0339889 
 
 
-
 
NC_007954  Sden_0712  chemotaxis sensory transducer  67.47 
 
 
541 aa  708    Shewanella denitrificans OS217  Bacteria  hitchhiker  0.0000566108  n/a   
 
 
-
 
NC_008321  Shewmr4_2995  methyl-accepting chemotaxis sensory transducer  100 
 
 
541 aa  1084    Shewanella sp. MR-4  Bacteria  hitchhiker  0.00226615  normal  0.196783 
 
 
-
 
NC_008322  Shewmr7_3076  methyl-accepting chemotaxis sensory transducer  100 
 
 
541 aa  1084    Shewanella sp. MR-7  Bacteria  unclonable  0.0000214454  normal  0.805143 
 
 
-
 
NC_008345  Sfri_0861  methyl-accepting chemotaxis sensory transducer  61.55 
 
 
542 aa  618  1e-176  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1374  methyl-accepting chemotaxis protein  35.22 
 
 
541 aa  322  9.999999999999999e-87  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1674  methyl-accepting chemotaxis sensory transducer  35.13 
 
 
543 aa  285  2.0000000000000002e-75  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_3114  histidine kinase, HAMP region: chemotaxis sensory transducer  34.35 
 
 
541 aa  270  5.9999999999999995e-71  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.860602  normal 
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  41.92 
 
 
637 aa  269  8.999999999999999e-71  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_009439  Pmen_3139  methyl-accepting chemotaxis sensory transducer  42.35 
 
 
640 aa  268  2e-70  Pseudomonas mendocina ymp  Bacteria  normal  0.753261  normal  0.0120166 
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  41.62 
 
 
541 aa  266  8e-70  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_008789  Hhal_0443  methyl-accepting chemotaxis sensory transducer  32.97 
 
 
541 aa  263  4e-69  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_3279  methyl-accepting chemotaxis protein  34.3 
 
 
541 aa  259  6e-68  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.149652  n/a   
 
 
-
 
NC_011901  Tgr7_2492  methyl-accepting chemotaxis sensory transducer  44.48 
 
 
572 aa  256  1.0000000000000001e-66  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_3750  methyl-accepting chemotaxis sensory transducer  34.01 
 
 
533 aa  254  3e-66  Delftia acidovorans SPH-1  Bacteria  normal  0.13147  normal  0.360613 
 
 
-
 
NC_004578  PSPTO_0466  methyl-accepting chemotaxis protein  33.82 
 
 
541 aa  253  5.000000000000001e-66  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  43.07 
 
 
636 aa  253  8.000000000000001e-66  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_009512  Pput_4894  methyl-accepting chemotaxis sensory transducer  42.64 
 
 
638 aa  253  8.000000000000001e-66  Pseudomonas putida F1  Bacteria  normal  0.291281  normal 
 
 
-
 
NC_004578  PSPTO_3098  methyl-accepting chemotaxis protein  39.68 
 
 
642 aa  252  1e-65  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.398555  n/a   
 
 
-
 
NC_002947  PP_5020  methyl-accepting chemotaxis sensory transducer  42.34 
 
 
638 aa  251  2e-65  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_1254  methyl-accepting chemotaxis sensory transducer  36.43 
 
 
639 aa  251  2e-65  Pseudomonas putida W619  Bacteria  normal  0.523103  normal  0.0331864 
 
 
-
 
NC_004578  PSPTO_1059  methyl-accepting chemotaxis protein  40.67 
 
 
629 aa  250  4e-65  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_0447  chemotaxis sensory transducer  32.32 
 
 
541 aa  250  4e-65  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_0380  histidine kinase, HAMP region: chemotaxis sensory transducer  39.19 
 
 
638 aa  249  1e-64  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  42.78 
 
 
713 aa  249  1e-64  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_008463  PA14_67010  putative chemotaxis transducer  42.24 
 
 
647 aa  248  2e-64  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_1701  methyl-accepting chemotaxis sensory transducer  41.29 
 
 
650 aa  248  2e-64  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.076135 
 
 
-
 
NC_009901  Spea_4196  methyl-accepting chemotaxis sensory transducer  44.38 
 
 
552 aa  248  3e-64  Shewanella pealeana ATCC 700345  Bacteria  normal  0.14959  n/a   
 
 
-
 
NC_010501  PputW619_0445  methyl-accepting chemotaxis sensory transducer  42.34 
 
 
638 aa  247  3e-64  Pseudomonas putida W619  Bacteria  normal  0.455391  normal 
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  39.64 
 
 
712 aa  248  3e-64  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  42.43 
 
 
716 aa  247  4e-64  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_009831  Ssed_3502  methyl-accepting chemotaxis sensory transducer  40.96 
 
 
620 aa  247  4.9999999999999997e-64  Shewanella sediminis HAW-EB3  Bacteria  normal  0.666992  normal  0.2901 
 
 
-
 
NC_007005  Psyr_0905  histidine kinase, HAMP region: chemotaxis sensory transducer  40.97 
 
 
640 aa  246  8e-64  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.746842  normal 
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  39.38 
 
 
712 aa  246  9e-64  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_008740  Maqu_2346  methyl-accepting chemotaxis sensory transducer  41.33 
 
 
564 aa  245  9.999999999999999e-64  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0219  methyl-accepting chemotaxis sensory transducer  42.44 
 
 
773 aa  244  1.9999999999999999e-63  Marinomonas sp. MWYL1  Bacteria  normal  0.952357  normal 
 
 
-
 
NC_010322  PputGB1_5070  methyl-accepting chemotaxis sensory transducer  41.74 
 
 
638 aa  245  1.9999999999999999e-63  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_0712  putative methyl-accepting chemotaxis sensory transducer  44.61 
 
 
624 aa  245  1.9999999999999999e-63  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_1007  methyl-accepting chemotaxis sensory transducer  40.88 
 
 
573 aa  244  3e-63  Shewanella sediminis HAW-EB3  Bacteria  normal  0.02936  normal 
 
 
-
 
NC_009831  Ssed_4463  methyl-accepting chemotaxis sensory transducer  44.22 
 
 
552 aa  244  3e-63  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.43301 
 
 
-
 
NC_009656  PSPA7_5811  putative chemotaxis transducer  42.61 
 
 
647 aa  244  3e-63  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2634  histidine kinase, HAMP region: chemotaxis sensory transducer  32.91 
 
 
542 aa  243  3.9999999999999997e-63  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.917034  normal 
 
 
-
 
NC_013889  TK90_1029  methyl-accepting chemotaxis sensory transducer  42.61 
 
 
411 aa  244  3.9999999999999997e-63  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_0317  methyl-accepting chemotaxis sensory transducer  35.55 
 
 
541 aa  243  5e-63  Pseudomonas putida KT2440  Bacteria  normal  0.365849  decreased coverage  0.0000342214 
 
 
-
 
NC_009512  Pput_0339  methyl-accepting chemotaxis sensory transducer  35.55 
 
 
541 aa  243  5e-63  Pseudomonas putida F1  Bacteria  normal  0.722367  normal 
 
 
-
 
NC_007005  Psyr_4706  histidine kinase, HAMP region: chemotaxis sensory transducer  33.57 
 
 
541 aa  243  5e-63  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_5071  methyl-accepting chemotaxis sensory transducer  40.51 
 
 
647 aa  243  7.999999999999999e-63  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  44.35 
 
 
637 aa  243  7.999999999999999e-63  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_007005  Psyr_2966  histidine kinase, HAMP region: chemotaxis sensory transducer  37.79 
 
 
642 aa  243  9e-63  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.249585  normal  0.113943 
 
 
-
 
NC_010322  PputGB1_0340  methyl-accepting chemotaxis sensory transducer  36.13 
 
 
541 aa  243  9e-63  Pseudomonas putida GB-1  Bacteria  normal  0.582352  normal 
 
 
-
 
NC_004578  PSPTO_3680  methyl-accepting chemotaxis protein  40.76 
 
 
676 aa  242  1e-62  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2326  methyl-accepting chemotaxis sensory transducer  33.62 
 
 
547 aa  242  1e-62  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011138  MADE_01731  Methyl-accepting chemotaxis protein  40.9 
 
 
539 aa  242  2e-62  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_2471  methyl-accepting chemotaxis sensory transducer  36.07 
 
 
425 aa  241  2.9999999999999997e-62  Pseudomonas mendocina ymp  Bacteria  normal  0.817651  normal 
 
 
-
 
NC_007492  Pfl01_4022  chemotaxis sensory transducer  39.44 
 
 
493 aa  240  4e-62  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_3284  methyl-accepting chemotaxis sensory transducer  38.52 
 
 
522 aa  241  4e-62  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_0778  methyl-accepting chemotaxis sensory transducer  43.24 
 
 
639 aa  240  5e-62  Pseudomonas putida W619  Bacteria  normal  normal  0.66043 
 
 
-
 
NC_009457  VC0395_A1249  methyl-accepting chemotaxis protein  38.99 
 
 
596 aa  240  5e-62  Vibrio cholerae O395  Bacteria  hitchhiker  0.000483868  n/a   
 
 
-
 
NC_008463  PA14_43710  putative methyl-accepting chemotaxis transducer  39.47 
 
 
541 aa  239  6.999999999999999e-62  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_1324  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  42.07 
 
 
523 aa  239  1e-61  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.587106  n/a   
 
 
-
 
NC_009901  Spea_3169  methyl-accepting chemotaxis sensory transducer  40.17 
 
 
620 aa  238  2e-61  Shewanella pealeana ATCC 700345  Bacteria  normal  0.225635  n/a   
 
 
-
 
NC_008700  Sama_2609  putative methyl-accepting chemotaxis sensory transducer  38.25 
 
 
621 aa  238  2e-61  Shewanella amazonensis SB2B  Bacteria  normal  0.206567  normal 
 
 
-
 
NC_011146  Gbem_1884  methyl-accepting chemotaxis sensory transducer  32.91 
 
 
547 aa  238  2e-61  Geobacter bemidjiensis Bem  Bacteria  normal  0.114501  n/a   
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  41.33 
 
 
638 aa  238  2e-61  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_010501  PputW619_1752  methyl-accepting chemotaxis sensory transducer  37.69 
 
 
492 aa  238  2e-61  Pseudomonas putida W619  Bacteria  normal  hitchhiker  0.000000224536 
 
 
-
 
NC_007005  Psyr_1798  histidine kinase, HAMP region: chemotaxis sensory transducer  40.41 
 
 
681 aa  238  3e-61  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.668901  normal  0.381267 
 
 
-
 
NC_007492  Pfl01_4833  chemotaxis sensory transducer  32.48 
 
 
541 aa  238  3e-61  Pseudomonas fluorescens Pf0-1  Bacteria  hitchhiker  0.000956827  normal  0.082646 
 
 
-
 
NC_002947  PP_5021  methyl-accepting chemotaxis sensory transducer  39.94 
 
 
647 aa  236  5.0000000000000005e-61  Pseudomonas putida KT2440  Bacteria  normal  0.0828859  normal 
 
 
-
 
NC_009512  Pput_4520  methyl-accepting chemotaxis sensory transducer  43.54 
 
 
639 aa  237  5.0000000000000005e-61  Pseudomonas putida F1  Bacteria  normal  normal  0.886367 
 
 
-
 
NC_002939  GSU2942  methyl-accepting chemotaxis protein  34.75 
 
 
544 aa  236  6e-61  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_4895  methyl-accepting chemotaxis sensory transducer  40 
 
 
739 aa  236  6e-61  Pseudomonas putida F1  Bacteria  normal  0.247309  normal 
 
 
-
 
NC_007005  Psyr_0868  histidine kinase, HAMP region: chemotaxis sensory transducer  31.59 
 
 
546 aa  236  6e-61  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.872643 
 
 
-
 
NC_002947  PP_4658  methyl-accepting chemotaxis sensory transducer  43.54 
 
 
639 aa  236  7e-61  Pseudomonas putida KT2440  Bacteria  normal  0.415489  normal 
 
 
-
 
NC_011901  Tgr7_0851  methyl-accepting chemotaxis sensory transducer  40.56 
 
 
674 aa  236  8e-61  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.244273  n/a   
 
 
-
 
NC_011901  Tgr7_1672  methyl-accepting chemotaxis sensory transducer  38.5 
 
 
544 aa  236  1.0000000000000001e-60  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_1426  methyl-accepting chemotaxis sensory transducer  41.43 
 
 
634 aa  235  1.0000000000000001e-60  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_4541  methyl-accepting chemotaxis protein  39.33 
 
 
541 aa  235  1.0000000000000001e-60  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.726322  n/a   
 
 
-
 
NC_010322  PputGB1_4653  methyl-accepting chemotaxis sensory transducer  43.24 
 
 
639 aa  235  1.0000000000000001e-60  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_0897  methyl-accepting chemotaxis sensory transducer  36.14 
 
 
541 aa  236  1.0000000000000001e-60  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_3725  methyl-accepting chemotaxis sensory transducer  37.37 
 
 
620 aa  235  1.0000000000000001e-60  Shewanella woodyi ATCC 51908  Bacteria  normal  0.403145  normal 
 
 
-
 
NC_009438  Sputcn32_0619  methyl-accepting chemotaxis sensory transducer  37.56 
 
 
634 aa  234  2.0000000000000002e-60  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_2000  methyl-accepting chemotaxis sensory transducer  40.39 
 
 
560 aa  234  2.0000000000000002e-60  Pseudomonas mendocina ymp  Bacteria  normal  0.0144557  normal  0.0324669 
 
 
-
 
NC_007005  Psyr_5092  histidine kinase, HAMP region: chemotaxis sensory transducer  39.47 
 
 
640 aa  235  2.0000000000000002e-60  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_2954  methyl-accepting chemotaxis sensory transducer  38.34 
 
 
620 aa  234  2.0000000000000002e-60  Shewanella loihica PV-4  Bacteria  decreased coverage  0.000679912  normal 
 
 
-
 
NC_010501  PputW619_4890  methyl-accepting chemotaxis sensory transducer  40.82 
 
 
541 aa  234  3e-60  Pseudomonas putida W619  Bacteria  normal  0.452969  normal  0.355365 
 
 
-
 
NC_009052  Sbal_3441  methyl-accepting chemotaxis sensory transducer  35.9 
 
 
541 aa  234  4.0000000000000004e-60  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_5553  methyl-accepting chemotaxis protein  40.92 
 
 
640 aa  233  5e-60  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_4141  chemotaxis transducer  41.19 
 
 
541 aa  233  5e-60  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_4266  chemotaxis sensory transducer  31.77 
 
 
546 aa  233  5e-60  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.261421  normal 
 
 
-
 
NC_012918  GM21_3719  methyl-accepting chemotaxis sensory transducer  30.81 
 
 
540 aa  233  5e-60  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
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