5 homologs were found in PanDaTox collection
for query gene Shewana3_4239 on replicon NC_008573
Organism: Shewanella sp. ANA-3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008573  Shewana3_4239    100 
 
 
510 bp  1011    Shewanella sp. ANA-3  Bacteria  normal  0.573269  hitchhiker  0.0025011 
 
 
-
 
NC_011668  Sbal223_4474  integrase family protein  90.98 
 
 
597 bp  155  1e-35  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_0280  phage integrase family site specific recombinase  91.92 
 
 
201 bp  133  5.0000000000000004e-29  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_2961    88.43 
 
 
135 bp  129  8.000000000000001e-28  Shewanella woodyi ATCC 51908  Bacteria  normal  0.474871  normal 
 
 
-
 
NC_008709  Ping_2569  phage integrase family protein  81.05 
 
 
597 bp  46.1  0.01  Psychromonas ingrahamii 37  Bacteria  normal  normal  0.0769947 
 
 
-
 
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