More than 300 homologs were found in PanDaTox collection
for query gene Shew_2868 on replicon NC_009092
Organism: Shewanella loihica PV-4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009656  PSPA7_5757  putative acyl-CoA dehydrogenase  59.01 
 
 
600 aa  714    Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_4948  acyl-CoA dehydrogenase domain-containing protein  58.68 
 
 
600 aa  703    Pseudomonas putida KT2440  Bacteria  normal  0.669366  normal 
 
 
-
 
NC_010322  PputGB1_4997  acyl-CoA dehydrogenase domain-containing protein  58.37 
 
 
600 aa  702    Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_66350  putative acyl-CoA dehydrogenase  59.17 
 
 
600 aa  716    Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_5020  acyl-CoA dehydrogenase family protein  57.38 
 
 
600 aa  697    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_1485  acyl-CoA dehydrogenase domain protein  53.43 
 
 
622 aa  647    Ralstonia pickettii 12D  Bacteria  normal  0.275641  normal  0.0574258 
 
 
-
 
NC_007005  Psyr_0505  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  57.38 
 
 
600 aa  702    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_0517  acyl-CoA dehydrogenase domain-containing protein  59.37 
 
 
600 aa  710    Pseudomonas putida W619  Bacteria  normal  0.0563795  normal  0.38064 
 
 
-
 
NC_007492  Pfl01_0451  Acyl-CoA dehydrogenase-like  57.21 
 
 
600 aa  701    Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.821544  normal 
 
 
-
 
NC_013510  Tcur_1227  acyl-CoA dehydrogenase domain protein  54.34 
 
 
599 aa  639    Thermomonospora curvata DSM 43183  Bacteria  normal  0.556988  n/a   
 
 
-
 
NC_008740  Maqu_2845  acyl-CoA dehydrogenase domain-containing protein  56.05 
 
 
600 aa  691    Marinobacter aquaeolei VT8  Bacteria  normal  0.26253  n/a   
 
 
-
 
NC_009439  Pmen_0561  acyl-CoA dehydrogenase domain-containing protein  57.5 
 
 
622 aa  694    Pseudomonas mendocina ymp  Bacteria  normal  hitchhiker  0.00000000252916 
 
 
-
 
NC_010682  Rpic_1444  acyl-CoA dehydrogenase domain protein  53.75 
 
 
622 aa  647    Ralstonia pickettii 12J  Bacteria  normal  normal  0.0386828 
 
 
-
 
NC_009512  Pput_4821  acyl-CoA dehydrogenase domain-containing protein  58.87 
 
 
600 aa  704    Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_008228  Patl_2141  acyl-CoA dehydrogenase-like  52.9 
 
 
616 aa  657    Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_5032  acyl-CoA dehydrogenase domain protein  53.92 
 
 
601 aa  662    Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.690717 
 
 
-
 
NC_008345  Sfri_2066  acyl-CoA dehydrogenase domain-containing protein  53.73 
 
 
601 aa  662    Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_2868  acyl-CoA dehydrogenase domain-containing protein  100 
 
 
602 aa  1243    Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc1762  acyl-CoA dehydrogenase oxidoreductase protein  53.49 
 
 
625 aa  634  1e-180  Ralstonia solanacearum GMI1000  Bacteria  normal  0.492096  normal  0.209412 
 
 
-
 
NC_013757  Gobs_4675  acyl-CoA dehydrogenase domain protein  53.3 
 
 
597 aa  627  1e-178  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_008010  Dgeo_2405  acyl-CoA dehydrogenase-like  53.32 
 
 
598 aa  613  9.999999999999999e-175  Deinococcus geothermalis DSM 11300  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A1408  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  51.61 
 
 
618 aa  610  1e-173  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0119  acyl-CoA dehydrogenase domain-containing protein  51.97 
 
 
588 aa  608  1e-173  Mycobacterium sp. KMS  Bacteria  normal  normal  0.0234574 
 
 
-
 
NC_011138  MADE_01005  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  50.99 
 
 
611 aa  610  1e-173  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_1852  acyl-CoA dehydrogenase-like protein  53.3 
 
 
619 aa  608  1e-173  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.232086 
 
 
-
 
NC_008146  Mmcs_0110  acyl-CoA dehydrogenase-like protein  51.97 
 
 
588 aa  608  1e-173  Mycobacterium sp. MCS  Bacteria  normal  0.242894  n/a   
 
 
-
 
NC_009077  Mjls_0100  acyl-CoA dehydrogenase domain-containing protein  51.64 
 
 
588 aa  603  1.0000000000000001e-171  Mycobacterium sp. JLS  Bacteria  normal  normal  0.119602 
 
 
-
 
NC_007969  Pcryo_0861  acyl-CoA dehydrogenase-like  49.58 
 
 
601 aa  591  1e-167  Psychrobacter cryohalolentis K5  Bacteria  normal  normal 
 
 
-
 
NC_009524  PsycPRwf_1004  acyl-CoA dehydrogenase domain-containing protein  49.67 
 
 
601 aa  591  1e-167  Psychrobacter sp. PRwf-1  Bacteria  normal  hitchhiker  0.0000430658 
 
 
-
 
NC_013441  Gbro_3567  acyl-CoA dehydrogenase domain protein  51.4 
 
 
591 aa  587  1e-166  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_1320  acyl-CoA dehydrogenase domain-containing protein  50.32 
 
 
609 aa  584  1.0000000000000001e-165  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.895638 
 
 
-
 
NC_014158  Tpau_0702  acyl-CoA dehydrogenase domain protein  50.99 
 
 
606 aa  581  1e-164  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A4473  Acyl-CoA dehydrogenase  50 
 
 
609 aa  572  1.0000000000000001e-162  Burkholderia sp. 383  Bacteria  normal  0.398734  normal 
 
 
-
 
NC_013946  Mrub_2720  acyl-CoA dehydrogenase domain-containing protein  50.87 
 
 
592 aa  571  1e-161  Meiothermus ruber DSM 1279  Bacteria  normal  0.78242  normal 
 
 
-
 
NC_010551  BamMC406_1258  acyl-CoA dehydrogenase domain-containing protein  50.8 
 
 
609 aa  570  1e-161  Burkholderia ambifaria MC40-6  Bacteria  normal  0.594087  normal 
 
 
-
 
NC_008542  Bcen2424_1341  acyl-CoA dehydrogenase domain-containing protein  50.16 
 
 
609 aa  568  1e-160  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_1582  acyl-CoA dehydrogenase domain protein  50.41 
 
 
598 aa  567  1e-160  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.900007  decreased coverage  0.00956274 
 
 
-
 
NC_008060  Bcen_0860  acyl-CoA dehydrogenase-like  50.16 
 
 
609 aa  568  1e-160  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_007509  Bcep18194_C7558  Acyl-CoA dehydrogenase  47.56 
 
 
607 aa  562  1.0000000000000001e-159  Burkholderia sp. 383  Bacteria  normal  0.0382442  normal  0.166512 
 
 
-
 
NC_008390  Bamb_1233  acyl-CoA dehydrogenase domain-containing protein  50 
 
 
609 aa  559  1e-158  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_009484  Acry_1573  acyl-CoA dehydrogenase domain-containing protein  47.49 
 
 
599 aa  539  9.999999999999999e-153  Acidiphilium cryptum JF-5  Bacteria  normal  0.77864  n/a   
 
 
-
 
NC_008825  Mpe_A1777  putative acyl-CoA dehydrogenase  48.28 
 
 
617 aa  531  1e-149  Methylibium petroleiphilum PM1  Bacteria  normal  0.130183  normal  0.0640101 
 
 
-
 
NC_012791  Vapar_2922  acyl-CoA dehydrogenase domain protein  47.05 
 
 
617 aa  499  1e-140  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_2017  acyl-CoA dehydrogenase domain protein  45.5 
 
 
619 aa  498  1e-139  Acidovorax ebreus TPSY  Bacteria  normal  0.875107  n/a   
 
 
-
 
NC_008782  Ajs_1687  acyl-CoA dehydrogenase domain-containing protein  46.15 
 
 
642 aa  493  9.999999999999999e-139  Acidovorax sp. JS42  Bacteria  normal  normal  0.291033 
 
 
-
 
NC_010002  Daci_3315  acyl-CoA dehydrogenase domain-containing protein  45.81 
 
 
645 aa  485  1e-136  Delftia acidovorans SPH-1  Bacteria  normal  hitchhiker  0.00913148 
 
 
-
 
NC_008752  Aave_2877  acyl-CoA dehydrogenase domain-containing protein  43.83 
 
 
652 aa  483  1e-135  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_2570  acyl-CoA dehydrogenase-like  44.69 
 
 
627 aa  484  1e-135  Polaromonas sp. JS666  Bacteria  normal  0.215249  normal  0.667801 
 
 
-
 
NC_007908  Rfer_2384  acyl-CoA dehydrogenase-like  45.98 
 
 
618 aa  479  1e-134  Rhodoferax ferrireducens T118  Bacteria  normal  0.225519  n/a   
 
 
-
 
NC_008699  Noca_1853  acyl-CoA dehydrogenase domain-containing protein  45.76 
 
 
608 aa  471  1.0000000000000001e-131  Nocardioides sp. JS614  Bacteria  normal  0.771828  n/a   
 
 
-
 
NC_008786  Veis_1790  acyl-CoA dehydrogenase domain-containing protein  48.06 
 
 
563 aa  448  1.0000000000000001e-124  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_4640  acyl-CoA dehydrogenase domain protein  43.15 
 
 
599 aa  441  9.999999999999999e-123  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_1076  acyl-CoA dehydrogenase domain protein  41.06 
 
 
606 aa  431  1e-119  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.276449 
 
 
-
 
NC_009943  Dole_2366  acyl-CoA dehydrogenase domain-containing protein  37.31 
 
 
601 aa  401  9.999999999999999e-111  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000000727045  n/a   
 
 
-
 
NC_009943  Dole_2164  acyl-CoA dehydrogenase domain-containing protein  37.76 
 
 
605 aa  388  1e-106  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000000583422  n/a   
 
 
-
 
NC_010581  Bind_1754  acyl-CoA dehydrogenase domain-containing protein  37.59 
 
 
594 aa  383  1e-105  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.0420795 
 
 
-
 
NC_011666  Msil_1741  acyl-CoA dehydrogenase domain protein  37.76 
 
 
594 aa  385  1e-105  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_009484  Acry_0007  acyl-CoA dehydrogenase domain-containing protein  36.79 
 
 
596 aa  382  1e-105  Acidiphilium cryptum JF-5  Bacteria  normal  0.419421  n/a   
 
 
-
 
NC_007336  Reut_C6066  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  38.85 
 
 
598 aa  380  1e-104  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_2265  acyl-CoA dehydrogenase domain protein  38.1 
 
 
598 aa  380  1e-104  Thauera sp. MZ1T  Bacteria  normal  0.086163  n/a   
 
 
-
 
NC_007517  Gmet_2211  Acyl-CoA dehydrogenase-like  37.07 
 
 
615 aa  380  1e-104  Geobacter metallireducens GS-15  Bacteria  normal  0.0172956  normal  0.0102784 
 
 
-
 
NC_007643  Rru_A1308  Acyl-CoA dehydrogenase  37.76 
 
 
596 aa  377  1e-103  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.135322  n/a   
 
 
-
 
NC_010681  Bphyt_0661  acyl-CoA dehydrogenase domain protein  39.24 
 
 
595 aa  372  1e-102  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_1305  acyl-CoA dehydrogenase domain-containing protein  35.78 
 
 
604 aa  374  1e-102  Desulfococcus oleovorans Hxd3  Bacteria  decreased coverage  0.000000712718  n/a   
 
 
-
 
NC_008782  Ajs_0592  acyl-CoA dehydrogenase domain-containing protein  38.89 
 
 
598 aa  374  1e-102  Acidovorax sp. JS42  Bacteria  normal  normal  0.559108 
 
 
-
 
NC_008463  PA14_09630  putative acyl-CoA dehydrogenase  39.03 
 
 
593 aa  371  1e-101  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.806665  normal 
 
 
-
 
NC_012792  Vapar_5356  acyl-CoA dehydrogenase domain protein  38.38 
 
 
592 aa  365  1e-100  Variovorax paradoxus S110  Bacteria  normal  0.253086  n/a   
 
 
-
 
NC_009952  Dshi_0839  acyl-CoA dehydrogenase domain protein  38.4 
 
 
592 aa  367  1e-100  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.704355 
 
 
-
 
NC_007298  Daro_0227  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  38.1 
 
 
592 aa  366  1e-100  Dechloromonas aromatica RCB  Bacteria  normal  0.100884  normal 
 
 
-
 
NC_009439  Pmen_3101  acyl-CoA dehydrogenase domain-containing protein  38.09 
 
 
592 aa  367  1e-100  Pseudomonas mendocina ymp  Bacteria  normal  0.165418  normal 
 
 
-
 
NC_007951  Bxe_A4038  putative acyl-CoA dehydrogenase oxidoreductase  39.93 
 
 
595 aa  366  1e-100  Burkholderia xenovorans LB400  Bacteria  normal  0.922091  normal  0.0585748 
 
 
-
 
NC_011992  Dtpsy_0571  acyl-CoA dehydrogenase domain protein  38.54 
 
 
598 aa  367  1e-100  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_009524  PsycPRwf_0912  acyl-CoA dehydrogenase domain-containing protein  39.02 
 
 
597 aa  365  1e-99  Psychrobacter sp. PRwf-1  Bacteria  normal  normal 
 
 
-
 
NC_010622  Bphy_0385  acyl-CoA dehydrogenase domain-containing protein  38.4 
 
 
595 aa  365  1e-99  Burkholderia phymatum STM815  Bacteria  normal  0.840786  normal  0.461604 
 
 
-
 
NC_010501  PputW619_4832  acyl-CoA dehydrogenase domain-containing protein  38.53 
 
 
592 aa  365  1e-99  Pseudomonas putida W619  Bacteria  normal  normal  0.946881 
 
 
-
 
NC_003910  CPS_1177  acyl-CoA dehydrogenase family protein  36.64 
 
 
598 aa  365  2e-99  Colwellia psychrerythraea 34H  Bacteria  normal  0.158836  n/a   
 
 
-
 
NC_009656  PSPA7_0609  putative acyl-CoA dehydrogenase  39.13 
 
 
592 aa  364  3e-99  Pseudomonas aeruginosa PA7  Bacteria  normal  0.666513  n/a   
 
 
-
 
NC_009439  Pmen_3819  acyl-CoA dehydrogenase domain-containing protein  39.34 
 
 
590 aa  364  3e-99  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_0370  acyl-CoA dehydrogenase domain-containing protein  38.61 
 
 
592 aa  363  4e-99  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc0473  putative acyl-CoA dehydrogenase oxidoreductase protein  37.93 
 
 
595 aa  363  4e-99  Ralstonia solanacearum GMI1000  Bacteria  normal  0.390432  normal 
 
 
-
 
NC_007794  Saro_2105  acyl-CoA dehydrogenase-like  39.22 
 
 
600 aa  363  4e-99  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.0867626  n/a   
 
 
-
 
NC_002947  PP_3554  acyl-CoA dehydrogenase domain-containing protein  38.36 
 
 
589 aa  362  1e-98  Pseudomonas putida KT2440  Bacteria  normal  0.244117  normal 
 
 
-
 
NC_009512  Pput_0396  acyl-CoA dehydrogenase domain-containing protein  38.61 
 
 
592 aa  362  1e-98  Pseudomonas putida F1  Bacteria  normal  0.352257  normal 
 
 
-
 
NC_009511  Swit_3797  acyl-CoA dehydrogenase domain-containing protein  36.41 
 
 
596 aa  362  1e-98  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.163707 
 
 
-
 
NC_008463  PA14_06640  putative acyl-CoA dehydrogenase  39.13 
 
 
592 aa  362  1e-98  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_2220  acyl-CoA dehydrogenase domain-containing protein  38.01 
 
 
594 aa  361  2e-98  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_5167  Acyl-CoA dehydrogenase-like  37.46 
 
 
598 aa  361  2e-98  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.0783661 
 
 
-
 
NC_010682  Rpic_0348  acyl-CoA dehydrogenase domain protein  38.14 
 
 
595 aa  361  2e-98  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_0363  acyl-CoA dehydrogenase domain protein  38.32 
 
 
595 aa  361  2e-98  Ralstonia pickettii 12D  Bacteria  normal  0.84094  normal 
 
 
-
 
NC_009439  Pmen_4079  acyl-CoA dehydrogenase domain-containing protein  38.78 
 
 
592 aa  361  2e-98  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_4089  acyl-CoA dehydrogenase domain-containing protein  38.24 
 
 
601 aa  361  2e-98  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_2749  acyl-CoA dehydrogenase domain-containing protein  38.72 
 
 
596 aa  361  3e-98  Marinobacter aquaeolei VT8  Bacteria  normal  0.59666  n/a   
 
 
-
 
NC_010322  PputGB1_0400  acyl-CoA dehydrogenase domain-containing protein  38.44 
 
 
592 aa  360  4e-98  Pseudomonas putida GB-1  Bacteria  normal  normal  0.672876 
 
 
-
 
NC_004578  PSPTO_0506  acyl-CoA dehydrogenase family protein  38.99 
 
 
592 aa  360  4e-98  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_4677  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  38.82 
 
 
592 aa  360  4e-98  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0983724  normal 
 
 
-
 
NC_011071  Smal_2777  acyl-CoA dehydrogenase domain protein  38.68 
 
 
596 aa  360  5e-98  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.932954  normal 
 
 
-
 
NC_010508  Bcenmc03_2748  acyl-CoA dehydrogenase domain-containing protein  37.73 
 
 
595 aa  359  9e-98  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.139086  normal 
 
 
-
 
NC_008542  Bcen2424_2721  acyl-CoA dehydrogenase domain-containing protein  37.73 
 
 
595 aa  359  9e-98  Burkholderia cenocepacia HI2424  Bacteria  normal  0.440911  n/a   
 
 
-
 
NC_008060  Bcen_2109  acyl-CoA dehydrogenase-like  37.73 
 
 
595 aa  359  9e-98  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_0462  acyl-CoA dehydrogenase domain-containing protein  36.9 
 
 
597 aa  358  9.999999999999999e-98  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.29438  normal 
 
 
-
 
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