More than 300 homologs were found in PanDaTox collection
for query gene Shew_2301 on replicon NC_009092
Organism: Shewanella loihica PV-4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_004347  SO_1278  methyl-accepting chemotaxis protein  71.25 
 
 
706 aa  1012    Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009997  Sbal195_1220  methyl-accepting chemotaxis sensory transducer  71.95 
 
 
706 aa  1027    Shewanella baltica OS195  Bacteria  normal  normal  0.46231 
 
 
-
 
NC_009665  Shew185_1187  methyl-accepting chemotaxis sensory transducer  71.95 
 
 
706 aa  1027    Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_2301  methyl-accepting chemotaxis sensory transducer  100 
 
 
705 aa  1417    Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_2635  putative methyl-accepting chemotaxis sensory transducer  65.86 
 
 
706 aa  920    Shewanella amazonensis SB2B  Bacteria  normal  normal  0.993869 
 
 
-
 
NC_009831  Ssed_1066  methyl-accepting chemotaxis sensory transducer  70.07 
 
 
705 aa  988    Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_1103  methyl-accepting chemotaxis sensory transducer  72.52 
 
 
706 aa  996    Shewanella putrefaciens CN-32  Bacteria  normal  0.540965  n/a   
 
 
-
 
NC_007954  Sden_0911  chemotaxis sensory transducer  70.35 
 
 
705 aa  1002    Shewanella denitrificans OS217  Bacteria  unclonable  0.0000000403524  n/a   
 
 
-
 
NC_008321  Shewmr4_2909  methyl-accepting chemotaxis sensory transducer  72.8 
 
 
706 aa  1039    Shewanella sp. MR-4  Bacteria  normal  normal  0.307732 
 
 
-
 
NC_008322  Shewmr7_2991  methyl-accepting chemotaxis sensory transducer  72.95 
 
 
706 aa  1039    Shewanella sp. MR-7  Bacteria  normal  0.0750474  normal 
 
 
-
 
NC_008577  Shewana3_3088  methyl-accepting chemotaxis sensory transducer  73.09 
 
 
706 aa  1046    Shewanella sp. ANA-3  Bacteria  normal  0.0193815  hitchhiker  0.00820004 
 
 
-
 
NC_011663  Sbal223_3170  methyl-accepting chemotaxis sensory transducer  71.95 
 
 
706 aa  1027    Shewanella baltica OS223  Bacteria  normal  normal  0.942476 
 
 
-
 
NC_008345  Sfri_3002  methyl-accepting chemotaxis sensory transducer  69.04 
 
 
705 aa  960    Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.568622  n/a   
 
 
-
 
NC_011138  MADE_01109  methyl-accepting chemotaxis protein  41.94 
 
 
743 aa  486  1e-136  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.566074  n/a   
 
 
-
 
NC_009654  Mmwyl1_3709  methyl-accepting chemotaxis sensory transducer  34.64 
 
 
707 aa  413  1e-114  Marinomonas sp. MWYL1  Bacteria  normal  0.852924  normal  0.967698 
 
 
-
 
NC_003910  CPS_2050  methyl-accepting chemotaxis protein  35.27 
 
 
704 aa  388  1e-106  Colwellia psychrerythraea 34H  Bacteria  normal  0.459277  n/a   
 
 
-
 
NC_009512  Pput_1257  methyl-accepting chemotaxis sensory transducer  33.76 
 
 
688 aa  323  5e-87  Pseudomonas putida F1  Bacteria  normal  0.124474  normal 
 
 
-
 
NC_002947  PP_1228  methyl-accepting chemotaxis transducer  33.43 
 
 
688 aa  322  9.999999999999999e-87  Pseudomonas putida KT2440  Bacteria  normal  normal  0.739741 
 
 
-
 
NC_009831  Ssed_3827  methyl-accepting chemotaxis transducer  32.14 
 
 
695 aa  321  3e-86  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.0000221184 
 
 
-
 
NC_010322  PputGB1_4190  methyl-accepting chemotaxis sensory transducer  33.52 
 
 
688 aa  320  3.9999999999999996e-86  Pseudomonas putida GB-1  Bacteria  normal  0.251316  normal 
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  32.96 
 
 
712 aa  313  9e-84  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_010501  PputW619_3984  methyl-accepting chemotaxis sensory transducer  32.3 
 
 
688 aa  308  2.0000000000000002e-82  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  33.23 
 
 
712 aa  306  6e-82  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  34.27 
 
 
716 aa  306  9.000000000000001e-82  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_009656  PSPA7_2546  putative chemotaxis transducer  31.38 
 
 
714 aa  305  1.0000000000000001e-81  Pseudomonas aeruginosa PA7  Bacteria  normal  0.410637  n/a   
 
 
-
 
NC_009439  Pmen_1998  methyl-accepting chemotaxis sensory transducer  32.18 
 
 
714 aa  301  3e-80  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.0164438 
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  31.51 
 
 
713 aa  298  2e-79  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_008463  PA14_29760  putative chemotaxis transducer  31.1 
 
 
714 aa  298  2e-79  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_4382  chemotaxis sensory transducer  31.62 
 
 
738 aa  293  1e-77  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.218372 
 
 
-
 
NC_007492  Pfl01_2970  chemotaxis sensory transducer  31.92 
 
 
712 aa  290  7e-77  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_3557  methyl-accepting chemotaxis transducer  32.59 
 
 
714 aa  285  2.0000000000000002e-75  Pseudomonas putida KT2440  Bacteria  normal  0.386044  normal 
 
 
-
 
NC_009512  Pput_2217  methyl-accepting chemotaxis sensory transducer  32.43 
 
 
714 aa  284  4.0000000000000003e-75  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_2365  methyl-accepting chemotaxis sensory transducer  32.41 
 
 
714 aa  283  9e-75  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_2074  methyl-accepting chemotaxis sensory transducer  32.69 
 
 
714 aa  281  3e-74  Pseudomonas putida W619  Bacteria  normal  0.203311  normal 
 
 
-
 
NC_007492  Pfl01_3770  chemotaxis sensory transducer  32.14 
 
 
715 aa  281  3e-74  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_1940  methyl-accepting chemotaxis transducer  29.29 
 
 
716 aa  247  6e-64  Pseudomonas putida KT2440  Bacteria  normal  unclonable  0.00000108039 
 
 
-
 
NC_003910  CPS_4675  methyl-accepting chemotaxis protein  29.52 
 
 
701 aa  243  7.999999999999999e-63  Colwellia psychrerythraea 34H  Bacteria  normal  0.595763  n/a   
 
 
-
 
NC_011312  VSAL_I1951  methyl-accepting chemotaxis protein  29.67 
 
 
720 aa  241  2.9999999999999997e-62  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_011312  VSAL_I2193  methyl-accepting chemotaxis protein  31.19 
 
 
697 aa  238  2e-61  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A1450  methyl-accepting chemotaxis protein  26.07 
 
 
706 aa  234  4.0000000000000004e-60  Vibrio cholerae O395  Bacteria  hitchhiker  0.000000000571496  n/a   
 
 
-
 
NC_007963  Csal_1099  methyl-accepting chemotaxis sensory transducer  26.9 
 
 
699 aa  233  8.000000000000001e-60  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_2154  methyl-accepting chemotaxis sensory transducer  31.76 
 
 
627 aa  232  2e-59  Pseudomonas mendocina ymp  Bacteria  normal  0.0789614  normal  0.507372 
 
 
-
 
NC_009485  BBta_6717  methyl-accepting chemotaxis sensory transducer  29.17 
 
 
741 aa  231  5e-59  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.447835  normal  0.587139 
 
 
-
 
NC_009654  Mmwyl1_1586  methyl-accepting chemotaxis sensory transducer  31.73 
 
 
626 aa  228  3e-58  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009783  VIBHAR_02788  hypothetical protein  28.28 
 
 
698 aa  228  4e-58  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013512  Sdel_1205  chemotaxis sensory transducer  27.81 
 
 
713 aa  227  6e-58  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0525  methyl-accepting chemotaxis sensory transducer with Cache sensor  32.46 
 
 
632 aa  224  3e-57  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_013456  VEA_003063  methyl-accepting chemotaxis protein  30.45 
 
 
682 aa  224  4.9999999999999996e-57  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_4783  methyl-accepting chemotaxis sensory transducer  29.95 
 
 
730 aa  221  3.9999999999999997e-56  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_003139  methyl-accepting chemotaxis protein  31.54 
 
 
627 aa  219  1e-55  Vibrio sp. Ex25  Bacteria  normal  0.116124  n/a   
 
 
-
 
NC_007925  RPC_3161  methyl-accepting chemotaxis sensory transducer  30.03 
 
 
731 aa  219  1e-55  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.072786  normal 
 
 
-
 
NC_009783  VIBHAR_01884  hypothetical protein  31.89 
 
 
627 aa  219  1e-55  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009654  Mmwyl1_0969  methyl-accepting chemotaxis sensory transducer  31.93 
 
 
631 aa  218  2.9999999999999998e-55  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_4029  methyl-accepting chemotaxis sensory transducer  32.47 
 
 
630 aa  217  5e-55  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_1321  methyl-accepting chemotaxis sensory transducer  27.45 
 
 
730 aa  216  9e-55  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0177086  normal  0.260794 
 
 
-
 
NC_009052  Sbal_2364  methyl-accepting chemotaxis sensory transducer  30.28 
 
 
622 aa  216  9e-55  Shewanella baltica OS155  Bacteria  normal  0.493821  n/a   
 
 
-
 
NC_008789  Hhal_0443  methyl-accepting chemotaxis sensory transducer  39 
 
 
541 aa  216  9.999999999999999e-55  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  35.08 
 
 
637 aa  216  9.999999999999999e-55  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_008577  Shewana3_2521  methyl-accepting chemotaxis sensory transducer  43.28 
 
 
533 aa  215  1.9999999999999998e-54  Shewanella sp. ANA-3  Bacteria  normal  hitchhiker  0.000172201 
 
 
-
 
NC_013457  VEA_001423  methyl-accepting chemotaxis protein  30.28 
 
 
623 aa  214  2.9999999999999995e-54  Vibrio sp. Ex25  Bacteria  normal  0.896179  n/a   
 
 
-
 
NC_007492  Pfl01_0450  chemotaxis sensory transducer  31.56 
 
 
645 aa  214  5.999999999999999e-54  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  38.76 
 
 
541 aa  214  5.999999999999999e-54  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_008577  Shewana3_0895  methyl-accepting chemotaxis sensory transducer  31.65 
 
 
630 aa  213  7e-54  Shewanella sp. ANA-3  Bacteria  normal  normal  0.174985 
 
 
-
 
NC_009483  Gura_3311  methyl-accepting chemotaxis sensory transducer  37.03 
 
 
547 aa  213  1e-53  Geobacter uraniireducens Rf4  Bacteria  normal  0.691655  n/a   
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  39.58 
 
 
636 aa  213  1e-53  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_009831  Ssed_3477  putative methyl-accepting chemotaxis protein  30.49 
 
 
622 aa  211  3e-53  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.000522984 
 
 
-
 
NC_009456  VC0395_0316  methyl-accepting chemotaxis protein  32.2 
 
 
652 aa  211  3e-53  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_06314  histidine kinase  31.39 
 
 
623 aa  211  5e-53  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  40.42 
 
 
637 aa  210  6e-53  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_004347  SO_1056  methyl-accepting chemotaxis protein  30.96 
 
 
630 aa  210  7e-53  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009456  VC0395_0173  methyl-accepting chemotaxis protein  31.16 
 
 
639 aa  210  9e-53  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_0930  methyl-accepting chemotaxis sensory transducer  32.09 
 
 
630 aa  210  9e-53  Shewanella sp. MR-7  Bacteria  normal  normal  0.257402 
 
 
-
 
NC_011312  VSAL_I0799  methyl-accepting chemotaxis protein  30.76 
 
 
624 aa  209  1e-52  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_3042  methyl-accepting chemotaxis sensory transducer  31.27 
 
 
630 aa  209  1e-52  Shewanella sp. MR-4  Bacteria  normal  normal  0.397129 
 
 
-
 
NC_009901  Spea_3491  methyl-accepting chemotaxis sensory transducer with Cache sensor  33.01 
 
 
626 aa  209  1e-52  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_0712  methyl-accepting chemotaxis sensory transducer with Cache sensor  31.3 
 
 
627 aa  208  3e-52  Shewanella woodyi ATCC 51908  Bacteria  normal  0.0412159  hitchhiker  0.0000400753 
 
 
-
 
NC_009831  Ssed_0837  methyl-accepting chemotaxis sensory transducer  36.8 
 
 
554 aa  208  3e-52  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_0237  methyl-accepting chemotaxis sensory transducer  32.13 
 
 
632 aa  208  3e-52  Shewanella loihica PV-4  Bacteria  normal  normal  0.997473 
 
 
-
 
NC_009901  Spea_3492  methyl-accepting chemotaxis sensory transducer with Cache sensor  32.75 
 
 
626 aa  207  7e-52  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_2880  putative methyl-accepting chemotaxis sensory transducer  36.16 
 
 
558 aa  206  1e-51  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_3455  methyl-accepting chemotaxis sensory transducer  35.39 
 
 
543 aa  206  1e-51  Shewanella baltica OS185  Bacteria  normal  0.0121993  n/a   
 
 
-
 
NC_004578  PSPTO_2448  methyl-accepting chemotaxis protein  31.37 
 
 
646 aa  206  1e-51  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.718596  n/a   
 
 
-
 
NC_011663  Sbal223_3382  methyl-accepting chemotaxis sensory transducer  35.39 
 
 
543 aa  206  1e-51  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009457  VC0395_A0908  methyl-accepting chemotaxis protein  31.36 
 
 
633 aa  206  1e-51  Vibrio cholerae O395  Bacteria  hitchhiker  0.00000172893  n/a   
 
 
-
 
NC_007492  Pfl01_0657  chemotaxis sensory transducer, Cache sensor  31.68 
 
 
648 aa  205  2e-51  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.511779  normal 
 
 
-
 
NC_009997  Sbal195_3579  methyl-accepting chemotaxis sensory transducer  35.39 
 
 
543 aa  206  2e-51  Shewanella baltica OS195  Bacteria  normal  normal  0.0986947 
 
 
-
 
NC_009052  Sbal_0908  methyl-accepting chemotaxis sensory transducer  35.39 
 
 
543 aa  205  3e-51  Shewanella baltica OS155  Bacteria  normal  0.073872  n/a   
 
 
-
 
NC_009457  VC0395_A0868  methyl-accepting chemotaxis protein  40.35 
 
 
536 aa  204  3e-51  Vibrio cholerae O395  Bacteria  hitchhiker  0.000231989  n/a   
 
 
-
 
NC_007498  Pcar_0439  methyl-accepting chemotaxis protein (MCP)  26.58 
 
 
740 aa  205  3e-51  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_2316  putative methyl-accepting chemotaxis sensory transducer  39.14 
 
 
548 aa  205  3e-51  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0208981 
 
 
-
 
NC_009438  Sputcn32_3200  methyl-accepting chemotaxis sensory transducer  35.71 
 
 
554 aa  204  5e-51  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_2121  methyl-accepting chemotaxis sensory transducer  29.79 
 
 
622 aa  203  7e-51  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_1793  methyl-accepting chemotaxis sensory transducer  43.44 
 
 
533 aa  203  7e-51  Shewanella baltica OS195  Bacteria  normal  0.0175347  normal  0.776493 
 
 
-
 
NC_011663  Sbal223_2530  methyl-accepting chemotaxis sensory transducer with Cache sensor  43.44 
 
 
533 aa  203  8e-51  Shewanella baltica OS223  Bacteria  normal  0.616311  hitchhiker  0.00580613 
 
 
-
 
NC_008577  Shewana3_0923  methyl-accepting chemotaxis sensory transducer  34.69 
 
 
543 aa  203  9e-51  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_0808  methyl-accepting chemotaxis sensory transducer  38.66 
 
 
554 aa  203  9e-51  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_3603  methyl-accepting chemotaxis sensory transducer  30.83 
 
 
630 aa  203  9.999999999999999e-51  Shewanella baltica OS195  Bacteria  normal  0.840663  normal 
 
 
-
 
NC_009665  Shew185_3480  methyl-accepting chemotaxis sensory transducer  29.72 
 
 
630 aa  202  9.999999999999999e-51  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_0925  methyl-accepting chemotaxis sensory transducer  35.23 
 
 
543 aa  202  9.999999999999999e-51  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_0959  methyl-accepting chemotaxis sensory transducer  34.69 
 
 
543 aa  202  9.999999999999999e-51  Shewanella sp. MR-7  Bacteria  normal  0.656726  normal  0.666936 
 
 
-
 
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