12 homologs were found in PanDaTox collection
for query gene Shew_1855 on replicon NC_009092
Organism: Shewanella loihica PV-4



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009092  Shew_1855  hypothetical protein  100 
 
 		 88 aa  176  7e-44  Shewanella loihica PV-4  Bacteria  hitchhiker  0.00000389519  unclonable  0.00000199628 
 
 
-
 
NC_010506  Swoo_2181  hypothetical protein  60.94 
 
 		 86 aa  75.5  0.0000000000002  Shewanella woodyi ATCC 51908  Bacteria  hitchhiker  0.000000881606  normal  0.0380637 
 
 
-
 
NC_008700  Sama_1638  hypothetical protein  69.39 
 
 		 88 aa  70.9  0.000000000006  Shewanella amazonensis SB2B  Bacteria  normal  0.106951  normal  0.182055 
 
 
-
 
NC_009901  Spea_1984  hypothetical protein  51.9 
 
 		 79 aa  68.2  0.00000000004  Shewanella pealeana ATCC 700345  Bacteria  hitchhiker  0.00531718  n/a   
 
 
-
 
NC_007954  Sden_2135  hypothetical protein  80.95 
 
 		 100 aa  54.7  0.0000004  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.00000000196527  n/a   
 
 
-
 
NC_009831  Ssed_2425  hypothetical protein  56.47 
 
 		 78 aa  54.7  0.0000004  Shewanella sediminis HAW-EB3  Bacteria  normal  1  decreased coverage  0.000000867114 
 
 
-
 
NC_008345  Sfri_1758  hypothetical protein  52.46 
 
 		 77 aa  42.7  0.002  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.348968  n/a   
 
 
-
 
NC_009665  Shew185_2364  hypothetical protein  49.32 
 
 		 80 aa  41.2  0.005  Shewanella baltica OS185  Bacteria  hitchhiker  0.00105863  n/a   
 
 
-
 
NC_011663  Sbal223_1983  hypothetical protein  49.32 
 
 		 80 aa  41.2  0.005  Shewanella baltica OS223  Bacteria  hitchhiker  0.000000137823  hitchhiker  0.000000000851334 
 
 
-
 
NC_009052  Sbal_2376  hypothetical protein  49.32 
 
 		 80 aa  40  0.009  Shewanella baltica OS155  Bacteria  hitchhiker  0.000217298  n/a   
 
 
-
 
NC_009997  Sbal195_2479  hypothetical protein  50.63 
 
 		 84 aa  40.4  0.009  Shewanella baltica OS195  Bacteria  unclonable  0.0000000167852  decreased coverage  0.0000699142 
 
 
-
 
NC_004347  SO_2479  hypothetical protein  52.11 
 
 		 78 aa  40  0.01  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
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