More than 300 homologs were found in PanDaTox collection
for query gene Shew_0922 on replicon NC_009092
Organism: Shewanella loihica PV-4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009092  Shew_0922  methyl-accepting chemotaxis sensory transducer  100 
 
 
572 aa  1145    Shewanella loihica PV-4  Bacteria  normal  normal  0.981358 
 
 
-
 
NC_009831  Ssed_1007  methyl-accepting chemotaxis sensory transducer  71.58 
 
 
573 aa  778    Shewanella sediminis HAW-EB3  Bacteria  normal  0.02936  normal 
 
 
-
 
NC_009831  Ssed_1006  methyl-accepting chemotaxis sensory transducer  68.82 
 
 
573 aa  718    Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_0900  methyl-accepting chemotaxis sensory transducer  68.35 
 
 
573 aa  699    Shewanella pealeana ATCC 700345  Bacteria  normal  0.476047  n/a   
 
 
-
 
NC_009457  VC0395_A1249  methyl-accepting chemotaxis protein  51.58 
 
 
596 aa  550  1e-155  Vibrio cholerae O395  Bacteria  hitchhiker  0.000483868  n/a   
 
 
-
 
NC_011901  Tgr7_1674  methyl-accepting chemotaxis sensory transducer  36.1 
 
 
543 aa  301  2e-80  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008739  Maqu_3979  methyl-accepting chemotaxis sensory transducer  36.53 
 
 
552 aa  289  8e-77  Marinobacter aquaeolei VT8  Bacteria  normal  0.594367  n/a   
 
 
-
 
NC_008740  Maqu_0633  methyl-accepting chemotaxis sensory transducer  36.53 
 
 
552 aa  289  8e-77  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_013422  Hneap_1124  methyl-accepting chemotaxis sensory transducer  36.03 
 
 
547 aa  288  2e-76  Halothiobacillus neapolitanus c2  Bacteria  hitchhiker  0.00163985  n/a   
 
 
-
 
NC_007517  Gmet_2828  methyl-accepting chemotaxis sensory transducer  33.64 
 
 
550 aa  269  1e-70  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.000014913 
 
 
-
 
NC_010814  Glov_2890  methyl-accepting chemotaxis sensory transducer  32.07 
 
 
549 aa  256  7e-67  Geobacter lovleyi SZ  Bacteria  normal  0.824592  n/a   
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  43.91 
 
 
541 aa  253  7e-66  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_011901  Tgr7_2492  methyl-accepting chemotaxis sensory transducer  39.55 
 
 
572 aa  250  4e-65  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_0580  putative methyl-accepting chemotaxis sensory transducer  46.15 
 
 
679 aa  249  7e-65  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  45.21 
 
 
636 aa  248  2e-64  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  40.47 
 
 
712 aa  247  3e-64  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  40.21 
 
 
712 aa  247  4.9999999999999997e-64  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_004578  PSPTO_1059  methyl-accepting chemotaxis protein  40.98 
 
 
629 aa  246  6.999999999999999e-64  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_3705  methyl-accepting chemotaxis sensory transducer  37.19 
 
 
541 aa  246  8e-64  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0963791  normal 
 
 
-
 
NC_009901  Spea_4196  methyl-accepting chemotaxis sensory transducer  32.92 
 
 
552 aa  244  3e-63  Shewanella pealeana ATCC 700345  Bacteria  normal  0.14959  n/a   
 
 
-
 
NC_009831  Ssed_4463  methyl-accepting chemotaxis sensory transducer  43.38 
 
 
552 aa  243  7e-63  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.43301 
 
 
-
 
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  45.18 
 
 
637 aa  243  7.999999999999999e-63  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_009654  Mmwyl1_0219  methyl-accepting chemotaxis sensory transducer  39.6 
 
 
773 aa  242  1e-62  Marinomonas sp. MWYL1  Bacteria  normal  0.952357  normal 
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  40.17 
 
 
638 aa  242  2e-62  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_007005  Psyr_2315  histidine kinase, HAMP region: chemotaxis sensory transducer  40.38 
 
 
653 aa  240  5.999999999999999e-62  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.967368  normal 
 
 
-
 
NC_009052  Sbal_1494  methyl-accepting chemotaxis sensory transducer  36.04 
 
 
548 aa  238  2e-61  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0905  histidine kinase, HAMP region: chemotaxis sensory transducer  41.64 
 
 
640 aa  238  2e-61  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.746842  normal 
 
 
-
 
NC_009439  Pmen_3139  methyl-accepting chemotaxis sensory transducer  43.1 
 
 
640 aa  238  2e-61  Pseudomonas mendocina ymp  Bacteria  normal  0.753261  normal  0.0120166 
 
 
-
 
NC_011901  Tgr7_0851  methyl-accepting chemotaxis sensory transducer  39.29 
 
 
674 aa  238  2e-61  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.244273  n/a   
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  43.85 
 
 
716 aa  237  4e-61  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_004578  PSPTO_2511  methyl-accepting chemotaxis protein  40.06 
 
 
653 aa  234  5e-60  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.295069  n/a   
 
 
-
 
NC_011901  Tgr7_1672  methyl-accepting chemotaxis sensory transducer  34.73 
 
 
544 aa  233  1e-59  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0380  histidine kinase, HAMP region: chemotaxis sensory transducer  40.51 
 
 
638 aa  233  1e-59  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_5020  methyl-accepting chemotaxis sensory transducer  41.27 
 
 
638 aa  231  2e-59  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_2284  methyl-accepting chemotaxis sensory transducer  39.66 
 
 
653 aa  231  3e-59  Pseudomonas putida W619  Bacteria  normal  hitchhiker  0.00297466 
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  40.8 
 
 
713 aa  231  3e-59  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_009512  Pput_4894  methyl-accepting chemotaxis sensory transducer  40.96 
 
 
638 aa  230  6e-59  Pseudomonas putida F1  Bacteria  normal  0.291281  normal 
 
 
-
 
NC_009092  Shew_0876  methyl-accepting chemotaxis sensory transducer  38.76 
 
 
674 aa  230  6e-59  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_4266  chemotaxis sensory transducer  37.09 
 
 
546 aa  230  6e-59  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.261421  normal 
 
 
-
 
NC_004578  PSPTO_5553  methyl-accepting chemotaxis protein  38.83 
 
 
640 aa  229  1e-58  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_3424  methyl-accepting chemotaxis sensory transducer  36.39 
 
 
674 aa  229  1e-58  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.560716  n/a   
 
 
-
 
NC_011901  Tgr7_1425  methyl-accepting chemotaxis sensory transducer  43.87 
 
 
438 aa  228  2e-58  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_5092  histidine kinase, HAMP region: chemotaxis sensory transducer  39.59 
 
 
640 aa  228  2e-58  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007912  Sde_0081  putative methyl-accepting chemotaxis sensory transducer  45.02 
 
 
544 aa  228  2e-58  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_2822  putative methyl-accepting chemotaxis sensory transducer  40.76 
 
 
673 aa  227  4e-58  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.428629 
 
 
-
 
NC_010322  PputGB1_5070  methyl-accepting chemotaxis sensory transducer  40.96 
 
 
638 aa  227  5.0000000000000005e-58  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_1396  methyl-accepting chemotaxis sensory transducer  34.64 
 
 
548 aa  227  6e-58  Shewanella putrefaciens CN-32  Bacteria  normal  0.664947  n/a   
 
 
-
 
NC_004578  PSPTO_3098  methyl-accepting chemotaxis protein  35.25 
 
 
642 aa  225  1e-57  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.398555  n/a   
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  37.87 
 
 
637 aa  225  1e-57  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_007005  Psyr_2634  histidine kinase, HAMP region: chemotaxis sensory transducer  32.41 
 
 
542 aa  226  1e-57  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.917034  normal 
 
 
-
 
NC_010322  PputGB1_0343  methyl-accepting chemotaxis sensory transducer  41.64 
 
 
645 aa  225  1e-57  Pseudomonas putida GB-1  Bacteria  normal  0.675969  normal 
 
 
-
 
NC_008463  PA14_67010  putative chemotaxis transducer  41.9 
 
 
647 aa  225  2e-57  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_4192  chemotaxis sensory transducer  41.33 
 
 
654 aa  224  2e-57  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_0808  methyl-accepting chemotaxis sensory transducer  34.52 
 
 
541 aa  223  8e-57  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_4653  methyl-accepting chemotaxis sensory transducer  43.63 
 
 
639 aa  223  9.999999999999999e-57  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_004349  SO_A0106  methyl-accepting chemotaxis protein  37.8 
 
 
546 aa  222  9.999999999999999e-57  Shewanella oneidensis MR-1  Bacteria  normal  0.827543  n/a   
 
 
-
 
NC_009439  Pmen_1701  methyl-accepting chemotaxis sensory transducer  33.55 
 
 
650 aa  222  1.9999999999999999e-56  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.076135 
 
 
-
 
NC_009438  Sputcn32_0619  methyl-accepting chemotaxis sensory transducer  40.34 
 
 
634 aa  221  1.9999999999999999e-56  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_3580  methyl-accepting chemotaxis protein  31.81 
 
 
546 aa  221  3e-56  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_2607  putative methyl-accepting chemotaxis sensory transducer  40.11 
 
 
541 aa  221  3e-56  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.00122932  normal 
 
 
-
 
NC_007492  Pfl01_0728  chemotaxis sensory transducer  41.83 
 
 
639 aa  221  3e-56  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_0320  methyl-accepting chemotaxis sensory transducer  42.9 
 
 
645 aa  221  3.9999999999999997e-56  Pseudomonas putida KT2440  Bacteria  normal  decreased coverage  0.0000409011 
 
 
-
 
NC_009831  Ssed_0961  methyl-accepting chemotaxis sensory transducer  40.45 
 
 
675 aa  220  3.9999999999999997e-56  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_0342  methyl-accepting chemotaxis sensory transducer  42.9 
 
 
645 aa  221  3.9999999999999997e-56  Pseudomonas putida F1  Bacteria  normal  0.860801  normal 
 
 
-
 
NC_007005  Psyr_3351  histidine kinase, HAMP region: chemotaxis sensory transducer  35.31 
 
 
570 aa  220  6e-56  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0540062  normal  0.0241334 
 
 
-
 
NC_004578  PSPTO_2616  methyl-accepting chemotaxis protein  37.47 
 
 
633 aa  219  7e-56  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  decreased coverage  0.00438795  n/a   
 
 
-
 
NC_009052  Sbal_3441  methyl-accepting chemotaxis sensory transducer  34.9 
 
 
541 aa  219  8.999999999999998e-56  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_2907  chemotaxis sensory transducer  37.97 
 
 
541 aa  219  8.999999999999998e-56  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.300582 
 
 
-
 
NC_010506  Swoo_1011  methyl-accepting chemotaxis sensory transducer  39.84 
 
 
675 aa  219  1e-55  Shewanella woodyi ATCC 51908  Bacteria  normal  0.547128  hitchhiker  0.00024543 
 
 
-
 
NC_010506  Swoo_4795  methyl-accepting chemotaxis sensory transducer  38.48 
 
 
638 aa  219  1e-55  Shewanella woodyi ATCC 51908  Bacteria  normal  0.884167  hitchhiker  0.000462611 
 
 
-
 
NC_009665  Shew185_0897  methyl-accepting chemotaxis sensory transducer  34.9 
 
 
541 aa  219  1e-55  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_2891  chemotaxis sensory transducer  38.62 
 
 
673 aa  219  1e-55  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_1007  hemolysin secretion protein HylB  35.58 
 
 
548 aa  218  2e-55  Vibrio cholerae O395  Bacteria  normal  0.702356  n/a   
 
 
-
 
NC_010501  PputW619_4887  methyl-accepting chemotaxis sensory transducer  43.21 
 
 
645 aa  218  2e-55  Pseudomonas putida W619  Bacteria  normal  normal  0.658451 
 
 
-
 
NC_007005  Psyr_2356  histidine kinase, HAMP region: chemotaxis sensory transducer  39.39 
 
 
619 aa  218  2e-55  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0809243  normal  0.398562 
 
 
-
 
NC_008740  Maqu_3269  methyl-accepting chemotaxis sensory transducer  40.91 
 
 
605 aa  218  2e-55  Marinobacter aquaeolei VT8  Bacteria  hitchhiker  0.000515244  n/a   
 
 
-
 
NC_010501  PputW619_0778  methyl-accepting chemotaxis sensory transducer  43.31 
 
 
639 aa  218  2e-55  Pseudomonas putida W619  Bacteria  normal  normal  0.66043 
 
 
-
 
NC_009656  PSPA7_5811  putative chemotaxis transducer  42.54 
 
 
647 aa  218  2e-55  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2845  methyl-accepting chemotaxis sensory transducer  31.18 
 
 
549 aa  218  2.9999999999999998e-55  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000000597879  n/a   
 
 
-
 
NC_011663  Sbal223_0921  methyl-accepting chemotaxis sensory transducer  39.03 
 
 
541 aa  218  2.9999999999999998e-55  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_3611  methyl-accepting chemotaxis sensory transducer  37.73 
 
 
634 aa  218  2.9999999999999998e-55  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_0466  methyl-accepting chemotaxis protein  37.22 
 
 
541 aa  217  4e-55  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_1438  methyl-accepting chemotaxis sensory transducer  42.04 
 
 
540 aa  217  5e-55  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_4520  methyl-accepting chemotaxis sensory transducer  41.57 
 
 
639 aa  217  5e-55  Pseudomonas putida F1  Bacteria  normal  normal  0.886367 
 
 
-
 
NC_002947  PP_4658  methyl-accepting chemotaxis sensory transducer  41.57 
 
 
639 aa  217  5e-55  Pseudomonas putida KT2440  Bacteria  normal  0.415489  normal 
 
 
-
 
NC_009092  Shew_0085  methyl-accepting chemotaxis sensory transducer  35.95 
 
 
638 aa  217  5e-55  Shewanella loihica PV-4  Bacteria  normal  0.0647334  normal 
 
 
-
 
NC_007005  Psyr_2966  histidine kinase, HAMP region: chemotaxis sensory transducer  37.63 
 
 
642 aa  217  5.9999999999999996e-55  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.249585  normal  0.113943 
 
 
-
 
NC_009512  Pput_2091  methyl-accepting chemotaxis sensory transducer  40.41 
 
 
541 aa  216  7e-55  Pseudomonas putida F1  Bacteria  normal  0.596764  normal 
 
 
-
 
NC_007492  Pfl01_0450  chemotaxis sensory transducer  41.99 
 
 
645 aa  216  7e-55  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_0445  methyl-accepting chemotaxis sensory transducer  40.36 
 
 
638 aa  216  8e-55  Pseudomonas putida W619  Bacteria  normal  0.455391  normal 
 
 
-
 
NC_008740  Maqu_2346  methyl-accepting chemotaxis sensory transducer  40.84 
 
 
564 aa  216  9e-55  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_2263  methyl-accepting chemotaxis sensory transducer  36.43 
 
 
541 aa  216  9e-55  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_0931  methyl-accepting chemotaxis sensory transducer  38.64 
 
 
541 aa  216  9.999999999999999e-55  Shewanella baltica OS195  Bacteria  normal  normal  0.476721 
 
 
-
 
NC_004578  PSPTO_2480  methyl-accepting chemotaxis protein  39.22 
 
 
629 aa  216  9.999999999999999e-55  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_2268  methyl-accepting chemotaxis sensory transducer  40.7 
 
 
541 aa  215  9.999999999999999e-55  Pseudomonas putida GB-1  Bacteria  normal  0.255239  normal 
 
 
-
 
NC_004578  PSPTO_5159  methyl-accepting chemotaxis protein  39.66 
 
 
638 aa  215  1.9999999999999998e-54  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_1426  methyl-accepting chemotaxis sensory transducer  42.45 
 
 
634 aa  214  1.9999999999999998e-54  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_2970  chemotaxis sensory transducer  38.95 
 
 
712 aa  214  2.9999999999999995e-54  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_0379  histidine kinase, HAMP region: chemotaxis sensory transducer  40.7 
 
 
647 aa  214  3.9999999999999995e-54  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.454626  normal 
 
 
-
 
NC_009439  Pmen_0734  methyl-accepting chemotaxis sensory transducer  41.92 
 
 
643 aa  214  3.9999999999999995e-54  Pseudomonas mendocina ymp  Bacteria  normal  0.770301  normal 
 
 
-
 
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