5 homologs were found in PanDaTox collection
for query gene Shew_0072 on replicon NC_009092
Organism: Shewanella loihica PV-4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009092  Shew_0072  hypothetical protein  100 
 
 
173 aa  364  1e-100  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_013162  Coch_0635  hypothetical protein  31.47 
 
 
285 aa  55.5  0.0000004  Capnocytophaga ochracea DSM 7271  Bacteria  normal  0.890226  n/a   
 
 
-
 
NC_009952  Dshi_2328  hypothetical protein  31.19 
 
 
199 aa  46.6  0.0002  Dinoroseobacter shibae DFL 12  Bacteria  hitchhiker  0.00000000740366  normal  0.751095 
 
 
-
 
NC_009952  Dshi_2329  hypothetical protein  30.28 
 
 
197 aa  42.7  0.002  Dinoroseobacter shibae DFL 12  Bacteria  hitchhiker  0.000000218448  normal  0.931598 
 
 
-
 
NC_008312  Tery_1091  phage tail Collar  25.66 
 
 
671 aa  42.7  0.003  Trichodesmium erythraeum IMS101  Bacteria  normal  0.152489  normal 
 
 
-
 
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