More than 300 homologs were found in PanDaTox collection
for query gene Shel_27360 on replicon NC_013165
Organism: Slackia heliotrinireducens DSM 20476



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013165  Shel_27360  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  100 
 
 
517 aa  1042    Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.0445329  normal 
 
 
-
 
NC_013204  Elen_0473  transcriptional regulator, LuxR family  40.16 
 
 
488 aa  338  9.999999999999999e-92  Eggerthella lenta DSM 2243  Bacteria  normal  0.815594  normal 
 
 
-
 
NC_013165  Shel_22730  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  25.44 
 
 
502 aa  120  3.9999999999999996e-26  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0500  transcriptional regulator, LuxR family  28.08 
 
 
487 aa  116  7.999999999999999e-25  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.472786 
 
 
-
 
NC_013170  Ccur_13370  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  30 
 
 
537 aa  97.8  4e-19  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.925648  normal 
 
 
-
 
NC_013204  Elen_0368  transcriptional regulator, LuxR family  24.88 
 
 
516 aa  92.8  1e-17  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0617  transcriptional regulator, LuxR family  26.86 
 
 
505 aa  93.2  1e-17  Eggerthella lenta DSM 2243  Bacteria  normal  0.0935525  normal 
 
 
-
 
NC_013204  Elen_3038  transcriptional regulator, LuxR family  24.24 
 
 
569 aa  92.8  1e-17  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_13310  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  26.42 
 
 
469 aa  90.9  5e-17  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.0175254  normal 
 
 
-
 
NC_013165  Shel_06810  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  26.76 
 
 
520 aa  87.4  5e-16  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal  0.521043 
 
 
-
 
NC_013204  Elen_0421  transcriptional regulator, LuxR family  26.46 
 
 
552 aa  85.9  0.000000000000002  Eggerthella lenta DSM 2243  Bacteria  normal  0.0413788  hitchhiker  0.00000000225621 
 
 
-
 
NC_013204  Elen_0496  transcriptional regulator, LuxR family  26.25 
 
 
510 aa  85.5  0.000000000000002  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.484054 
 
 
-
 
NC_013204  Elen_0436  transcriptional regulator, LuxR family  44.79 
 
 
501 aa  85.1  0.000000000000003  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_1431  transcriptional regulator, LuxR family  29.88 
 
 
498 aa  83.6  0.000000000000008  Eggerthella lenta DSM 2243  Bacteria  normal  0.0577596  normal  0.857351 
 
 
-
 
NC_013204  Elen_2723  transcriptional regulator, LuxR family  27.05 
 
 
509 aa  80.5  0.00000000000006  Eggerthella lenta DSM 2243  Bacteria  normal  0.397924  normal 
 
 
-
 
NC_013204  Elen_0518  transcriptional regulator, LuxR family  24.13 
 
 
488 aa  80.5  0.00000000000006  Eggerthella lenta DSM 2243  Bacteria  normal  0.982453  normal  0.339001 
 
 
-
 
NC_013204  Elen_0133  transcriptional regulator, LuxR family  23.44 
 
 
480 aa  80.5  0.00000000000007  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.384824 
 
 
-
 
NC_013204  Elen_0514  transcriptional regulator, LuxR family  29.9 
 
 
493 aa  80.5  0.00000000000008  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.559597 
 
 
-
 
NC_013204  Elen_2929  transcriptional regulator, LuxR family  26.39 
 
 
462 aa  79  0.0000000000002  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0531  transcriptional regulator, LuxR family  28.52 
 
 
529 aa  78.6  0.0000000000003  Eggerthella lenta DSM 2243  Bacteria  normal  0.614613  normal  0.848046 
 
 
-
 
NC_013204  Elen_2353  transcriptional regulator, LuxR family  29.46 
 
 
516 aa  77.8  0.0000000000004  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_02650  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  27.71 
 
 
505 aa  77.4  0.0000000000006  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0440  transcriptional regulator, LuxR family  22.97 
 
 
526 aa  77  0.0000000000007  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0461  transcriptional regulator, LuxR family  24.5 
 
 
542 aa  77  0.0000000000008  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0181  transcriptional regulator, LuxR family  26.73 
 
 
600 aa  77  0.0000000000008  Eggerthella lenta DSM 2243  Bacteria  normal  0.294561  normal 
 
 
-
 
NC_013204  Elen_2779  transcriptional regulator, LuxR family  25.05 
 
 
505 aa  76.6  0.0000000000009  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.980405 
 
 
-
 
NC_013170  Ccur_01760  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  25.55 
 
 
546 aa  76.3  0.000000000001  Cryptobacterium curtum DSM 15641  Bacteria  normal  hitchhiker  0.0000265618 
 
 
-
 
NC_013165  Shel_16610  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  24.9 
 
 
491 aa  76.3  0.000000000001  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.0119595  normal  0.714327 
 
 
-
 
NC_013204  Elen_2824  transcriptional regulator, LuxR family  23.99 
 
 
550 aa  75.9  0.000000000002  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0578  transcriptional regulator, LuxR family  50.82 
 
 
474 aa  75.1  0.000000000003  Eggerthella lenta DSM 2243  Bacteria  normal  0.28219  normal 
 
 
-
 
NC_013204  Elen_1093  transcriptional regulator, LuxR family  46.67 
 
 
505 aa  75.1  0.000000000003  Eggerthella lenta DSM 2243  Bacteria  normal  0.569375  hitchhiker  0.0000000000000377381 
 
 
-
 
NC_013204  Elen_2290  transcriptional regulator, LuxR family  28.06 
 
 
493 aa  74.7  0.000000000004  Eggerthella lenta DSM 2243  Bacteria  normal  0.10968  normal 
 
 
-
 
NC_013204  Elen_0167  transcriptional regulator, LuxR family  21.84 
 
 
493 aa  74.3  0.000000000005  Eggerthella lenta DSM 2243  Bacteria  normal  0.165739  normal 
 
 
-
 
NC_013204  Elen_0072  transcriptional regulator, LuxR family  24.77 
 
 
477 aa  73.2  0.00000000001  Eggerthella lenta DSM 2243  Bacteria  normal  0.323936  normal 
 
 
-
 
NC_013204  Elen_1015  transcriptional regulator, LuxR family  46.88 
 
 
509 aa  72.4  0.00000000002  Eggerthella lenta DSM 2243  Bacteria  normal  0.221092  normal  0.129145 
 
 
-
 
NC_013204  Elen_0123  transcriptional regulator, LuxR family  24.1 
 
 
492 aa  72.8  0.00000000002  Eggerthella lenta DSM 2243  Bacteria  normal  0.891774  normal 
 
 
-
 
NC_013165  Shel_25010  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  46.88 
 
 
484 aa  72  0.00000000003  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2258  transcriptional regulator, LuxR family  37.5 
 
 
476 aa  71.6  0.00000000003  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013170  Ccur_13650  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  35.87 
 
 
464 aa  71.6  0.00000000003  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2693  transcriptional regulator, LuxR family  52.38 
 
 
80 aa  71.2  0.00000000004  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0289  transcriptional regulator, LuxR family  27.17 
 
 
498 aa  70.9  0.00000000005  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.797409 
 
 
-
 
NC_013170  Ccur_08650  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  25.82 
 
 
508 aa  70.9  0.00000000005  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.197798  normal  0.463051 
 
 
-
 
NC_013204  Elen_1837  transcriptional regulator, LuxR family  38.55 
 
 
487 aa  70.5  0.00000000008  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2786  transcriptional regulator, LuxR family  34.95 
 
 
511 aa  70.1  0.00000000009  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.0490323 
 
 
-
 
NC_013204  Elen_0341  transcriptional regulator, LuxR family  23.68 
 
 
478 aa  68.6  0.0000000002  Eggerthella lenta DSM 2243  Bacteria  normal  0.953627  normal 
 
 
-
 
NC_013204  Elen_1008  transcriptional regulator, LuxR family  46.15 
 
 
495 aa  68.9  0.0000000002  Eggerthella lenta DSM 2243  Bacteria  normal  0.831923  normal  0.0679507 
 
 
-
 
NC_013170  Ccur_10150  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  21.48 
 
 
483 aa  68.9  0.0000000002  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.906615  hitchhiker  0.00359447 
 
 
-
 
NC_013204  Elen_2816  transcriptional regulator, LuxR family  44.16 
 
 
471 aa  68.2  0.0000000003  Eggerthella lenta DSM 2243  Bacteria  normal  0.138304  hitchhiker  0.00338242 
 
 
-
 
NC_013204  Elen_0989  transcriptional regulator, LuxR family  42.31 
 
 
499 aa  68.6  0.0000000003  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2655  transcriptional regulator, LuxR family  42.03 
 
 
470 aa  68.6  0.0000000003  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.149331 
 
 
-
 
NC_013204  Elen_0445  transcriptional regulator, LuxR family  35.8 
 
 
534 aa  68.2  0.0000000003  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0992  transcriptional regulator, LuxR family  44.12 
 
 
493 aa  67.8  0.0000000004  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0392  transcriptional regulator, LuxR family  46.88 
 
 
529 aa  67.8  0.0000000004  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_03730  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  29.46 
 
 
426 aa  67.8  0.0000000005  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.532687  normal 
 
 
-
 
NC_013204  Elen_2699  transcriptional regulator, LuxR family  25.4 
 
 
478 aa  67.4  0.0000000006  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013170  Ccur_12490  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  37.5 
 
 
560 aa  67  0.0000000007  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0364  transcriptional regulator, LuxR family  27.23 
 
 
494 aa  67  0.0000000008  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.723912 
 
 
-
 
NC_013204  Elen_0506  transcriptional regulator, LuxR family  34 
 
 
519 aa  66.6  0.0000000009  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.274884 
 
 
-
 
NC_013204  Elen_0529  transcriptional regulator, LuxR family  25 
 
 
518 aa  66.6  0.000000001  Eggerthella lenta DSM 2243  Bacteria  normal  0.401207  normal  0.573322 
 
 
-
 
NC_013204  Elen_0108  transcriptional regulator, LuxR family  39.39 
 
 
493 aa  66.6  0.000000001  Eggerthella lenta DSM 2243  Bacteria  normal  0.44109  normal 
 
 
-
 
NC_013165  Shel_24540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  27.4 
 
 
536 aa  66.2  0.000000001  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0485  transcriptional regulator, LuxR family  44.44 
 
 
537 aa  66.6  0.000000001  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.619389 
 
 
-
 
NC_013204  Elen_3022  ATP-dependent transcriptional regulator, MalT- like, LuxR family  39.39 
 
 
485 aa  66.2  0.000000001  Eggerthella lenta DSM 2243  Bacteria  normal  0.709367  normal 
 
 
-
 
NC_013170  Ccur_03610  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  42.03 
 
 
470 aa  66.2  0.000000001  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.166414  normal  0.0491532 
 
 
-
 
NC_013170  Ccur_13550  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  26 
 
 
506 aa  65.5  0.000000002  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_1903  transcriptional regulator, LuxR family  43.24 
 
 
196 aa  65.5  0.000000002  Eggerthella lenta DSM 2243  Bacteria  normal  hitchhiker  0.000000231921 
 
 
-
 
NC_013165  Shel_26890  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  37.84 
 
 
515 aa  65.9  0.000000002  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2696  transcriptional regulator, LuxR family  39.76 
 
 
535 aa  65.9  0.000000002  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013170  Ccur_13460  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  35.24 
 
 
472 aa  65.5  0.000000003  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_06100  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  33.72 
 
 
518 aa  65.1  0.000000003  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal  0.603093 
 
 
-
 
NC_013170  Ccur_00480  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  47.46 
 
 
606 aa  65.1  0.000000003  Cryptobacterium curtum DSM 15641  Bacteria  decreased coverage  0.00118843  normal 
 
 
-
 
NC_013204  Elen_0171  transcriptional regulator, LuxR family  40.54 
 
 
484 aa  64.7  0.000000004  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2762  ATP-dependent transcriptional regulator, MalT- like, LuxR family  23.59 
 
 
520 aa  64.3  0.000000004  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2758  transcriptional regulator, LuxR family  32.43 
 
 
523 aa  64.7  0.000000004  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2932  transcriptional regulator, LuxR family  43.08 
 
 
492 aa  64.3  0.000000005  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0406  transcriptional regulator, LuxR family  30.15 
 
 
486 aa  64.3  0.000000006  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.0269651 
 
 
-
 
NC_013165  Shel_12700  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  37.31 
 
 
488 aa  63.5  0.000000008  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_1389  transcriptional regulator, LuxR family  24.55 
 
 
478 aa  63.5  0.000000009  Eggerthella lenta DSM 2243  Bacteria  normal  0.544965  normal 
 
 
-
 
NC_013204  Elen_0209  transcriptional regulator, LuxR family  34.38 
 
 
487 aa  63.5  0.000000009  Eggerthella lenta DSM 2243  Bacteria  normal  0.213353  normal  0.452607 
 
 
-
 
NC_013204  Elen_0523  transcriptional regulator, LuxR family  39.13 
 
 
511 aa  63.2  0.00000001  Eggerthella lenta DSM 2243  Bacteria  normal  0.500884  normal  0.253762 
 
 
-
 
NC_013170  Ccur_02050  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  43.08 
 
 
541 aa  63.2  0.00000001  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0630  transcriptional regulator, LuxR family  37.68 
 
 
528 aa  62.8  0.00000001  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2925  transcriptional regulator, LuxR family  43.08 
 
 
517 aa  63.2  0.00000001  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0615  transcriptional regulator, LuxR family  30.77 
 
 
462 aa  62.4  0.00000002  Eggerthella lenta DSM 2243  Bacteria  unclonable  0.000000110739  normal 
 
 
-
 
NC_013165  Shel_23170  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  40.3 
 
 
474 aa  62  0.00000002  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal  0.23412 
 
 
-
 
NC_013204  Elen_0985  transcriptional regulator, LuxR family  35.14 
 
 
476 aa  61.6  0.00000003  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.880452 
 
 
-
 
NC_013204  Elen_2114  transcriptional regulator, LuxR family  35.29 
 
 
191 aa  60.8  0.00000005  Eggerthella lenta DSM 2243  Bacteria  unclonable  0.00000000451621  normal  0.459179 
 
 
-
 
NC_013204  Elen_0597  transcriptional regulator, LuxR family  40.62 
 
 
493 aa  60.5  0.00000007  Eggerthella lenta DSM 2243  Bacteria  normal  0.882562  normal 
 
 
-
 
NC_013517  Sterm_3443  transcriptional regulator, LuxR family  27.49 
 
 
335 aa  60.5  0.00000008  Sebaldella termitidis ATCC 33386  Bacteria  hitchhiker  0.00126305  n/a   
 
 
-
 
NC_013165  Shel_20840  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  24.38 
 
 
524 aa  60.1  0.00000009  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.982335  normal 
 
 
-
 
NC_013204  Elen_0606  transcriptional regulator, LuxR family  43.33 
 
 
506 aa  60.1  0.0000001  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.290399 
 
 
-
 
NC_013204  Elen_0157  transcriptional regulator, LuxR family  41.56 
 
 
321 aa  59.3  0.0000002  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0184  transcriptional regulator, LuxR family  37.97 
 
 
507 aa  58.2  0.0000004  Eggerthella lenta DSM 2243  Bacteria  normal  0.131926  normal 
 
 
-
 
NC_008699  Noca_3120  response regulator receiver  41.3 
 
 
212 aa  57.4  0.0000006  Nocardioides sp. JS614  Bacteria  normal  0.230577  n/a   
 
 
-
 
NC_013204  Elen_0971  transcriptional regulator, LuxR family  36.25 
 
 
313 aa  57.4  0.0000006  Eggerthella lenta DSM 2243  Bacteria  normal  0.16732  hitchhiker  0.00115778 
 
 
-
 
NC_013204  Elen_0269  transcriptional regulator, LuxR family  39.13 
 
 
499 aa  57.4  0.0000006  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0520  transcriptional regulator, LuxR family  30.93 
 
 
520 aa  57.4  0.0000006  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.1412 
 
 
-
 
NC_008726  Mvan_3991  putative GAF sensor protein  38.75 
 
 
301 aa  57.4  0.0000007  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.637785  normal 
 
 
-
 
NC_013204  Elen_2532  transcriptional regulator, LuxR family  30.53 
 
 
500 aa  57  0.0000008  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_23080  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  34.09 
 
 
545 aa  57  0.0000008  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.865531  normal 
 
 
-
 
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