More than 300 homologs were found in PanDaTox collection
for query gene Shel_13310 on replicon NC_013165
Organism: Slackia heliotrinireducens DSM 20476



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013165  Shel_13310  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  100 
 
 
469 aa  942    Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.0175254  normal 
 
 
-
 
NC_013204  Elen_1431  transcriptional regulator, LuxR family  39.21 
 
 
498 aa  252  9.000000000000001e-66  Eggerthella lenta DSM 2243  Bacteria  normal  0.0577596  normal  0.857351 
 
 
-
 
NC_013170  Ccur_13370  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  40.44 
 
 
537 aa  207  5e-52  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.925648  normal 
 
 
-
 
NC_013204  Elen_0500  transcriptional regulator, LuxR family  26.68 
 
 
487 aa  95.9  2e-18  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.472786 
 
 
-
 
NC_013204  Elen_0473  transcriptional regulator, LuxR family  27.44 
 
 
488 aa  94  5e-18  Eggerthella lenta DSM 2243  Bacteria  normal  0.815594  normal 
 
 
-
 
NC_013165  Shel_27360  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  26.42 
 
 
517 aa  90.9  4e-17  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.0445329  normal 
 
 
-
 
NC_013204  Elen_0617  transcriptional regulator, LuxR family  28.81 
 
 
505 aa  85.9  0.000000000000001  Eggerthella lenta DSM 2243  Bacteria  normal  0.0935525  normal 
 
 
-
 
NC_013204  Elen_0518  transcriptional regulator, LuxR family  27.81 
 
 
488 aa  80.5  0.00000000000006  Eggerthella lenta DSM 2243  Bacteria  normal  0.982453  normal  0.339001 
 
 
-
 
NC_013204  Elen_0167  transcriptional regulator, LuxR family  29.82 
 
 
493 aa  78.6  0.0000000000002  Eggerthella lenta DSM 2243  Bacteria  normal  0.165739  normal 
 
 
-
 
NC_013170  Ccur_01760  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  25.49 
 
 
546 aa  78.6  0.0000000000002  Cryptobacterium curtum DSM 15641  Bacteria  normal  hitchhiker  0.0000265618 
 
 
-
 
NC_013170  Ccur_03610  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  30.29 
 
 
470 aa  77.8  0.0000000000004  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.166414  normal  0.0491532 
 
 
-
 
NC_013165  Shel_22730  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  24.39 
 
 
502 aa  77  0.0000000000006  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2258  transcriptional regulator, LuxR family  44.58 
 
 
476 aa  76.3  0.000000000001  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2655  transcriptional regulator, LuxR family  27.3 
 
 
470 aa  72.8  0.00000000001  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.149331 
 
 
-
 
NC_013204  Elen_0436  transcriptional regulator, LuxR family  42.11 
 
 
501 aa  72  0.00000000002  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_16610  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  48.44 
 
 
491 aa  71.6  0.00000000003  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.0119595  normal  0.714327 
 
 
-
 
NC_013204  Elen_0514  transcriptional regulator, LuxR family  29.63 
 
 
493 aa  69.7  0.0000000001  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.559597 
 
 
-
 
NC_013204  Elen_2816  transcriptional regulator, LuxR family  28.52 
 
 
471 aa  69.3  0.0000000001  Eggerthella lenta DSM 2243  Bacteria  normal  0.138304  hitchhiker  0.00338242 
 
 
-
 
NC_013170  Ccur_02050  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  41.89 
 
 
541 aa  69.3  0.0000000001  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013170  Ccur_08650  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  25.85 
 
 
508 aa  69.3  0.0000000001  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.197798  normal  0.463051 
 
 
-
 
NC_013204  Elen_1093  transcriptional regulator, LuxR family  31.5 
 
 
505 aa  69.7  0.0000000001  Eggerthella lenta DSM 2243  Bacteria  normal  0.569375  hitchhiker  0.0000000000000377381 
 
 
-
 
NC_013204  Elen_0123  transcriptional regulator, LuxR family  44.93 
 
 
492 aa  69.3  0.0000000001  Eggerthella lenta DSM 2243  Bacteria  normal  0.891774  normal 
 
 
-
 
NC_013170  Ccur_13650  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  26.99 
 
 
464 aa  68.6  0.0000000002  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013170  Ccur_12490  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  49.25 
 
 
560 aa  68.9  0.0000000002  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0976  transcriptional regulator, LuxR family  53.57 
 
 
501 aa  67.8  0.0000000004  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.018057 
 
 
-
 
NC_013204  Elen_0171  transcriptional regulator, LuxR family  31.72 
 
 
484 aa  67.8  0.0000000004  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_1389  transcriptional regulator, LuxR family  38.24 
 
 
478 aa  67.8  0.0000000004  Eggerthella lenta DSM 2243  Bacteria  normal  0.544965  normal 
 
 
-
 
NC_013204  Elen_2925  transcriptional regulator, LuxR family  49.12 
 
 
517 aa  67  0.0000000007  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0421  transcriptional regulator, LuxR family  44.44 
 
 
552 aa  66.6  0.0000000009  Eggerthella lenta DSM 2243  Bacteria  normal  0.0413788  hitchhiker  0.00000000225621 
 
 
-
 
NC_013204  Elen_0992  transcriptional regulator, LuxR family  51.72 
 
 
493 aa  66.2  0.000000001  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2290  transcriptional regulator, LuxR family  27.36 
 
 
493 aa  66.2  0.000000001  Eggerthella lenta DSM 2243  Bacteria  normal  0.10968  normal 
 
 
-
 
NC_013170  Ccur_10150  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  26.91 
 
 
483 aa  65.5  0.000000002  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.906615  hitchhiker  0.00359447 
 
 
-
 
NC_013204  Elen_0461  transcriptional regulator, LuxR family  50.88 
 
 
542 aa  65.1  0.000000003  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2723  transcriptional regulator, LuxR family  38.89 
 
 
509 aa  64.7  0.000000003  Eggerthella lenta DSM 2243  Bacteria  normal  0.397924  normal 
 
 
-
 
NC_013204  Elen_0606  transcriptional regulator, LuxR family  38.64 
 
 
506 aa  64.7  0.000000003  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.290399 
 
 
-
 
NC_013204  Elen_2693  transcriptional regulator, LuxR family  39.24 
 
 
80 aa  64.3  0.000000004  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2824  transcriptional regulator, LuxR family  37.93 
 
 
550 aa  64.3  0.000000004  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0506  transcriptional regulator, LuxR family  39.53 
 
 
519 aa  64.7  0.000000004  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.274884 
 
 
-
 
NC_013204  Elen_1015  transcriptional regulator, LuxR family  50 
 
 
509 aa  63.9  0.000000005  Eggerthella lenta DSM 2243  Bacteria  normal  0.221092  normal  0.129145 
 
 
-
 
NC_013204  Elen_2812  transcriptional regulator, LuxR family  45.21 
 
 
522 aa  64.3  0.000000005  Eggerthella lenta DSM 2243  Bacteria  hitchhiker  0.000674561  hitchhiker  0.0000653029 
 
 
-
 
NC_013170  Ccur_00480  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  39.24 
 
 
606 aa  63.9  0.000000005  Cryptobacterium curtum DSM 15641  Bacteria  decreased coverage  0.00118843  normal 
 
 
-
 
NC_013204  Elen_0496  transcriptional regulator, LuxR family  34 
 
 
510 aa  64.3  0.000000005  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.484054 
 
 
-
 
NC_013204  Elen_0630  transcriptional regulator, LuxR family  25.97 
 
 
528 aa  64.3  0.000000005  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0289  transcriptional regulator, LuxR family  31.29 
 
 
498 aa  63.9  0.000000006  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.797409 
 
 
-
 
NC_013204  Elen_0368  transcriptional regulator, LuxR family  23.81 
 
 
516 aa  63.9  0.000000006  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0529  transcriptional regulator, LuxR family  50 
 
 
518 aa  63.9  0.000000006  Eggerthella lenta DSM 2243  Bacteria  normal  0.401207  normal  0.573322 
 
 
-
 
NC_013165  Shel_25010  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  28.84 
 
 
484 aa  63.9  0.000000006  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0531  transcriptional regulator, LuxR family  53.33 
 
 
529 aa  63.5  0.000000008  Eggerthella lenta DSM 2243  Bacteria  normal  0.614613  normal  0.848046 
 
 
-
 
NC_013204  Elen_0485  transcriptional regulator, LuxR family  46.38 
 
 
537 aa  63.2  0.00000001  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.619389 
 
 
-
 
NC_013204  Elen_0440  transcriptional regulator, LuxR family  41.18 
 
 
526 aa  62.8  0.00000001  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_24540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  42.5 
 
 
536 aa  63.2  0.00000001  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_1837  transcriptional regulator, LuxR family  40 
 
 
487 aa  62.8  0.00000001  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_06100  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  40.54 
 
 
518 aa  62.8  0.00000001  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal  0.603093 
 
 
-
 
NC_013204  Elen_2762  ATP-dependent transcriptional regulator, MalT- like, LuxR family  48.33 
 
 
520 aa  62.8  0.00000001  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0269  transcriptional regulator, LuxR family  38.46 
 
 
499 aa  62  0.00000002  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0392  transcriptional regulator, LuxR family  50 
 
 
529 aa  62.4  0.00000002  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2795  transcriptional regulator, LuxR family  29.96 
 
 
468 aa  62  0.00000002  Eggerthella lenta DSM 2243  Bacteria  normal  hitchhiker  0.000289432 
 
 
-
 
NC_013204  Elen_0133  transcriptional regulator, LuxR family  39.68 
 
 
480 aa  62  0.00000002  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.384824 
 
 
-
 
NC_013204  Elen_0985  transcriptional regulator, LuxR family  43.06 
 
 
476 aa  62  0.00000002  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.880452 
 
 
-
 
NC_013204  Elen_2775  transcriptional regulator, LuxR family  51.85 
 
 
481 aa  61.2  0.00000003  Eggerthella lenta DSM 2243  Bacteria  normal  0.257993  normal  0.934511 
 
 
-
 
NC_013165  Shel_23080  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  37.27 
 
 
545 aa  62  0.00000003  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.865531  normal 
 
 
-
 
NC_013204  Elen_2699  transcriptional regulator, LuxR family  35.14 
 
 
478 aa  61.2  0.00000003  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_06810  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  44.26 
 
 
520 aa  61.6  0.00000003  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal  0.521043 
 
 
-
 
NC_013204  Elen_0489  transcriptional regulator, LuxR family  33.09 
 
 
468 aa  60.8  0.00000004  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.257042 
 
 
-
 
NC_013204  Elen_2929  transcriptional regulator, LuxR family  34.15 
 
 
462 aa  60.5  0.00000006  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0184  transcriptional regulator, LuxR family  46.43 
 
 
507 aa  60.1  0.00000008  Eggerthella lenta DSM 2243  Bacteria  normal  0.131926  normal 
 
 
-
 
NC_013204  Elen_1592  transcriptional regulator, LuxR family  27.2 
 
 
518 aa  60.1  0.00000008  Eggerthella lenta DSM 2243  Bacteria  normal  hitchhiker  0.000355637 
 
 
-
 
NC_013204  Elen_1008  transcriptional regulator, LuxR family  42.37 
 
 
495 aa  60.1  0.00000008  Eggerthella lenta DSM 2243  Bacteria  normal  0.831923  normal  0.0679507 
 
 
-
 
NC_013204  Elen_3038  transcriptional regulator, LuxR family  42.86 
 
 
569 aa  60.1  0.00000008  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2786  transcriptional regulator, LuxR family  46.55 
 
 
511 aa  60.1  0.00000009  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.0490323 
 
 
-
 
NC_013204  Elen_0597  transcriptional regulator, LuxR family  38.71 
 
 
493 aa  59.7  0.0000001  Eggerthella lenta DSM 2243  Bacteria  normal  0.882562  normal 
 
 
-
 
NC_013204  Elen_2353  transcriptional regulator, LuxR family  28.5 
 
 
516 aa  59.7  0.0000001  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_20840  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  41.79 
 
 
524 aa  59.3  0.0000001  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.982335  normal 
 
 
-
 
NC_013204  Elen_0578  transcriptional regulator, LuxR family  43.55 
 
 
474 aa  59.3  0.0000001  Eggerthella lenta DSM 2243  Bacteria  normal  0.28219  normal 
 
 
-
 
NC_013170  Ccur_13460  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  40 
 
 
472 aa  59.7  0.0000001  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_03730  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  46.97 
 
 
426 aa  59.7  0.0000001  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.532687  normal 
 
 
-
 
NC_013204  Elen_2688  transcriptional regulator, LuxR family  32.74 
 
 
470 aa  59.7  0.0000001  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0108  transcriptional regulator, LuxR family  35.96 
 
 
493 aa  58.9  0.0000002  Eggerthella lenta DSM 2243  Bacteria  normal  0.44109  normal 
 
 
-
 
NC_013165  Shel_12700  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  33.75 
 
 
488 aa  58.9  0.0000002  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_3603  transcriptional regulator, LuxR family  33.33 
 
 
364 aa  59.3  0.0000002  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_1291  transcriptional regulator, LuxR family  36.71 
 
 
300 aa  58.9  0.0000002  Eggerthella lenta DSM 2243  Bacteria  normal  0.979242  normal 
 
 
-
 
NC_013165  Shel_11580  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  38.03 
 
 
515 aa  58.9  0.0000002  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.937657  normal 
 
 
-
 
NC_013204  Elen_2758  transcriptional regulator, LuxR family  43.08 
 
 
523 aa  58.2  0.0000003  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_17090  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  36.76 
 
 
485 aa  58.2  0.0000003  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2696  transcriptional regulator, LuxR family  42.62 
 
 
535 aa  58.2  0.0000003  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013170  Ccur_06630  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  49.09 
 
 
215 aa  57.8  0.0000004  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.252447  normal  0.303532 
 
 
-
 
NC_013204  Elen_0523  transcriptional regulator, LuxR family  39.68 
 
 
511 aa  57.4  0.0000005  Eggerthella lenta DSM 2243  Bacteria  normal  0.500884  normal  0.253762 
 
 
-
 
NC_013204  Elen_3022  ATP-dependent transcriptional regulator, MalT- like, LuxR family  43.86 
 
 
485 aa  57.8  0.0000005  Eggerthella lenta DSM 2243  Bacteria  normal  0.709367  normal 
 
 
-
 
NC_013204  Elen_0406  transcriptional regulator, LuxR family  34.09 
 
 
486 aa  56.6  0.0000008  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.0269651 
 
 
-
 
NC_013204  Elen_0445  transcriptional regulator, LuxR family  38.16 
 
 
534 aa  57  0.0000008  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_2681  LuxR family transcriptional regulator  49.09 
 
 
74 aa  55.8  0.000001  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_1253  two component transcriptional regulator, LuxR family  50.88 
 
 
203 aa  56.2  0.000001  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013170  Ccur_13550  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  41.33 
 
 
506 aa  56.2  0.000001  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_02650  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  30.7 
 
 
505 aa  56.2  0.000001  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1684  response regulator receiver protein  52.08 
 
 
207 aa  55.8  0.000001  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.966789 
 
 
-
 
NC_013131  Caci_4238  transcriptional regulator, LuxR family  41.94 
 
 
919 aa  55.5  0.000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.5259 
 
 
-
 
NC_013235  Namu_0956  transcriptional regulator, LuxR family  48.08 
 
 
344 aa  55.5  0.000002  Nakamurella multipartita DSM 44233  Bacteria  normal  0.886587  normal 
 
 
-
 
NC_008541  Arth_1234  LuxR family transcriptional regulator  52.63 
 
 
856 aa  55.1  0.000003  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013204  Elen_2532  transcriptional regulator, LuxR family  37.5 
 
 
500 aa  55.1  0.000003  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_4648  two component LuxR family transcriptional regulator  47.17 
 
 
219 aa  54.3  0.000004  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
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