More than 300 homologs were found in PanDaTox collection
for query gene Shel_06810 on replicon NC_013165
Organism: Slackia heliotrinireducens DSM 20476



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013165  Shel_06810  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  100 
 
 
520 aa  1055    Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal  0.521043 
 
 
-
 
NC_013204  Elen_2786  transcriptional regulator, LuxR family  50.29 
 
 
511 aa  502  1e-141  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.0490323 
 
 
-
 
NC_013204  Elen_0461  transcriptional regulator, LuxR family  43.92 
 
 
542 aa  434  1e-120  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0421  transcriptional regulator, LuxR family  42.64 
 
 
552 aa  392  1e-108  Eggerthella lenta DSM 2243  Bacteria  normal  0.0413788  hitchhiker  0.00000000225621 
 
 
-
 
NC_013204  Elen_2723  transcriptional regulator, LuxR family  40.15 
 
 
509 aa  339  7e-92  Eggerthella lenta DSM 2243  Bacteria  normal  0.397924  normal 
 
 
-
 
NC_013165  Shel_24540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  39.11 
 
 
536 aa  337  3.9999999999999995e-91  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_013170  Ccur_00480  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  33.28 
 
 
606 aa  315  1.9999999999999998e-84  Cryptobacterium curtum DSM 15641  Bacteria  decreased coverage  0.00118843  normal 
 
 
-
 
NC_013204  Elen_0368  transcriptional regulator, LuxR family  26.26 
 
 
516 aa  181  4e-44  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2699  transcriptional regulator, LuxR family  26.46 
 
 
478 aa  132  1.0000000000000001e-29  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0133  transcriptional regulator, LuxR family  27.04 
 
 
480 aa  121  3e-26  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.384824 
 
 
-
 
NC_013165  Shel_03730  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  27.54 
 
 
426 aa  119  9e-26  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.532687  normal 
 
 
-
 
NC_013165  Shel_27360  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  28.06 
 
 
517 aa  97.1  6e-19  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.0445329  normal 
 
 
-
 
NC_013204  Elen_0976  transcriptional regulator, LuxR family  27.62 
 
 
501 aa  97.1  7e-19  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.018057 
 
 
-
 
NC_013170  Ccur_13650  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  28.16 
 
 
464 aa  96.7  1e-18  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0126  hypothetical protein  23.55 
 
 
530 aa  93.6  7e-18  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0167  transcriptional regulator, LuxR family  24.38 
 
 
493 aa  92.4  2e-17  Eggerthella lenta DSM 2243  Bacteria  normal  0.165739  normal 
 
 
-
 
NC_013204  Elen_2762  ATP-dependent transcriptional regulator, MalT- like, LuxR family  25.93 
 
 
520 aa  90.1  8e-17  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2779  transcriptional regulator, LuxR family  27.04 
 
 
505 aa  88.6  3e-16  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.980405 
 
 
-
 
NC_013204  Elen_2655  transcriptional regulator, LuxR family  27.74 
 
 
470 aa  87.8  4e-16  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.149331 
 
 
-
 
NC_013204  Elen_2258  transcriptional regulator, LuxR family  41.24 
 
 
476 aa  87  7e-16  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0496  transcriptional regulator, LuxR family  29 
 
 
510 aa  86.3  0.000000000000001  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.484054 
 
 
-
 
NC_013165  Shel_02650  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  26.03 
 
 
505 aa  85.9  0.000000000000002  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2932  transcriptional regulator, LuxR family  25.09 
 
 
492 aa  84.7  0.000000000000004  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_22730  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  24.2 
 
 
502 aa  84.3  0.000000000000005  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0440  transcriptional regulator, LuxR family  24.66 
 
 
526 aa  83.2  0.00000000000001  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0531  transcriptional regulator, LuxR family  25.61 
 
 
529 aa  82.4  0.00000000000002  Eggerthella lenta DSM 2243  Bacteria  normal  0.614613  normal  0.848046 
 
 
-
 
NC_013204  Elen_0123  transcriptional regulator, LuxR family  28.17 
 
 
492 aa  82  0.00000000000002  Eggerthella lenta DSM 2243  Bacteria  normal  0.891774  normal 
 
 
-
 
NC_013204  Elen_0436  transcriptional regulator, LuxR family  37.38 
 
 
501 aa  81.3  0.00000000000004  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0500  transcriptional regulator, LuxR family  23.85 
 
 
487 aa  81.3  0.00000000000004  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.472786 
 
 
-
 
NC_013204  Elen_0108  transcriptional regulator, LuxR family  25.83 
 
 
493 aa  80.9  0.00000000000005  Eggerthella lenta DSM 2243  Bacteria  normal  0.44109  normal 
 
 
-
 
NC_013170  Ccur_03610  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  47.14 
 
 
470 aa  80.9  0.00000000000005  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.166414  normal  0.0491532 
 
 
-
 
NC_013165  Shel_12700  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  45.07 
 
 
488 aa  80.1  0.00000000000009  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2824  transcriptional regulator, LuxR family  25.57 
 
 
550 aa  80.1  0.0000000000001  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_3038  transcriptional regulator, LuxR family  38.46 
 
 
569 aa  78.6  0.0000000000002  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0171  transcriptional regulator, LuxR family  39.56 
 
 
484 aa  78.6  0.0000000000003  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0289  transcriptional regulator, LuxR family  47.14 
 
 
498 aa  78.2  0.0000000000004  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.797409 
 
 
-
 
NC_013204  Elen_2929  transcriptional regulator, LuxR family  25.53 
 
 
462 aa  77.4  0.0000000000006  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0269  transcriptional regulator, LuxR family  39.13 
 
 
499 aa  77  0.0000000000008  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0523  transcriptional regulator, LuxR family  42.22 
 
 
511 aa  76.6  0.000000000001  Eggerthella lenta DSM 2243  Bacteria  normal  0.500884  normal  0.253762 
 
 
-
 
NC_013204  Elen_0473  transcriptional regulator, LuxR family  25.8 
 
 
488 aa  76.3  0.000000000001  Eggerthella lenta DSM 2243  Bacteria  normal  0.815594  normal 
 
 
-
 
NC_013204  Elen_0485  transcriptional regulator, LuxR family  45.07 
 
 
537 aa  75.1  0.000000000003  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.619389 
 
 
-
 
NC_013204  Elen_0181  transcriptional regulator, LuxR family  29.82 
 
 
600 aa  75.1  0.000000000003  Eggerthella lenta DSM 2243  Bacteria  normal  0.294561  normal 
 
 
-
 
NC_013204  Elen_0514  transcriptional regulator, LuxR family  42.67 
 
 
493 aa  74.7  0.000000000003  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.559597 
 
 
-
 
NC_013204  Elen_0630  transcriptional regulator, LuxR family  44.29 
 
 
528 aa  74.7  0.000000000004  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_1592  transcriptional regulator, LuxR family  27.41 
 
 
518 aa  74.3  0.000000000005  Eggerthella lenta DSM 2243  Bacteria  normal  hitchhiker  0.000355637 
 
 
-
 
NC_013204  Elen_1389  transcriptional regulator, LuxR family  38.75 
 
 
478 aa  74.3  0.000000000006  Eggerthella lenta DSM 2243  Bacteria  normal  0.544965  normal 
 
 
-
 
NC_013204  Elen_0445  transcriptional regulator, LuxR family  23.36 
 
 
534 aa  73.6  0.000000000008  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2353  transcriptional regulator, LuxR family  44.74 
 
 
516 aa  73.6  0.000000000009  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0989  transcriptional regulator, LuxR family  24.66 
 
 
499 aa  72.8  0.00000000001  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_3022  ATP-dependent transcriptional regulator, MalT- like, LuxR family  41.67 
 
 
485 aa  73.2  0.00000000001  Eggerthella lenta DSM 2243  Bacteria  normal  0.709367  normal 
 
 
-
 
NC_013204  Elen_0506  transcriptional regulator, LuxR family  38.36 
 
 
519 aa  72.8  0.00000000001  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.274884 
 
 
-
 
NC_013204  Elen_0597  transcriptional regulator, LuxR family  50 
 
 
493 aa  72.8  0.00000000002  Eggerthella lenta DSM 2243  Bacteria  normal  0.882562  normal 
 
 
-
 
NC_013165  Shel_26890  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  29.75 
 
 
515 aa  72.4  0.00000000002  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_013170  Ccur_08650  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  36.05 
 
 
508 aa  72.4  0.00000000002  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.197798  normal  0.463051 
 
 
-
 
NC_013170  Ccur_13460  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  33.33 
 
 
472 aa  71.6  0.00000000003  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_1008  transcriptional regulator, LuxR family  46.97 
 
 
495 aa  71.6  0.00000000003  Eggerthella lenta DSM 2243  Bacteria  normal  0.831923  normal  0.0679507 
 
 
-
 
NC_013204  Elen_0518  transcriptional regulator, LuxR family  23.47 
 
 
488 aa  71.6  0.00000000004  Eggerthella lenta DSM 2243  Bacteria  normal  0.982453  normal  0.339001 
 
 
-
 
NC_013204  Elen_2532  transcriptional regulator, LuxR family  37.21 
 
 
500 aa  71.2  0.00000000004  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_25010  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  44.29 
 
 
484 aa  69.7  0.0000000001  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_23170  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  42.25 
 
 
474 aa  69.7  0.0000000001  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal  0.23412 
 
 
-
 
NC_013204  Elen_1093  transcriptional regulator, LuxR family  41.46 
 
 
505 aa  70.1  0.0000000001  Eggerthella lenta DSM 2243  Bacteria  normal  0.569375  hitchhiker  0.0000000000000377381 
 
 
-
 
NC_013165  Shel_06100  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  43.66 
 
 
518 aa  69.7  0.0000000001  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal  0.603093 
 
 
-
 
NC_013204  Elen_1431  transcriptional regulator, LuxR family  39.19 
 
 
498 aa  68.9  0.0000000002  Eggerthella lenta DSM 2243  Bacteria  normal  0.0577596  normal  0.857351 
 
 
-
 
NC_013204  Elen_2688  transcriptional regulator, LuxR family  46.03 
 
 
470 aa  69.3  0.0000000002  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013170  Ccur_13550  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  23.77 
 
 
506 aa  69.3  0.0000000002  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0529  transcriptional regulator, LuxR family  25.71 
 
 
518 aa  68.9  0.0000000002  Eggerthella lenta DSM 2243  Bacteria  normal  0.401207  normal  0.573322 
 
 
-
 
NC_013204  Elen_2696  transcriptional regulator, LuxR family  46.77 
 
 
535 aa  68.2  0.0000000003  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2812  transcriptional regulator, LuxR family  31.82 
 
 
522 aa  68.6  0.0000000003  Eggerthella lenta DSM 2243  Bacteria  hitchhiker  0.000674561  hitchhiker  0.0000653029 
 
 
-
 
NC_013170  Ccur_13370  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  43.94 
 
 
537 aa  67.8  0.0000000004  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.925648  normal 
 
 
-
 
NC_013204  Elen_0364  transcriptional regulator, LuxR family  28.08 
 
 
494 aa  67.4  0.0000000005  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.723912 
 
 
-
 
NC_013204  Elen_0406  transcriptional regulator, LuxR family  25.23 
 
 
486 aa  67.4  0.0000000006  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.0269651 
 
 
-
 
NC_013204  Elen_0617  transcriptional regulator, LuxR family  39.77 
 
 
505 aa  67  0.0000000009  Eggerthella lenta DSM 2243  Bacteria  normal  0.0935525  normal 
 
 
-
 
NC_013204  Elen_1837  transcriptional regulator, LuxR family  43.75 
 
 
487 aa  67  0.0000000009  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0992  transcriptional regulator, LuxR family  40 
 
 
493 aa  66.6  0.000000001  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2775  transcriptional regulator, LuxR family  42.05 
 
 
481 aa  66.2  0.000000001  Eggerthella lenta DSM 2243  Bacteria  normal  0.257993  normal  0.934511 
 
 
-
 
NC_013204  Elen_0072  transcriptional regulator, LuxR family  43.08 
 
 
477 aa  66.2  0.000000001  Eggerthella lenta DSM 2243  Bacteria  normal  0.323936  normal 
 
 
-
 
NC_013204  Elen_0578  transcriptional regulator, LuxR family  45.9 
 
 
474 aa  66.6  0.000000001  Eggerthella lenta DSM 2243  Bacteria  normal  0.28219  normal 
 
 
-
 
NC_013165  Shel_05580  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  39.68 
 
 
512 aa  64.7  0.000000004  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.735856  normal 
 
 
-
 
NC_013204  Elen_2925  transcriptional regulator, LuxR family  32.46 
 
 
517 aa  64.7  0.000000004  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013170  Ccur_10150  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  23.98 
 
 
483 aa  64.7  0.000000004  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.906615  hitchhiker  0.00359447 
 
 
-
 
NC_013204  Elen_0392  transcriptional regulator, LuxR family  37.89 
 
 
529 aa  64.3  0.000000005  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2795  transcriptional regulator, LuxR family  28.03 
 
 
468 aa  63.5  0.00000001  Eggerthella lenta DSM 2243  Bacteria  normal  hitchhiker  0.000289432 
 
 
-
 
NC_013204  Elen_2758  transcriptional regulator, LuxR family  30.39 
 
 
523 aa  63.2  0.00000001  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_1015  transcriptional regulator, LuxR family  39.13 
 
 
509 aa  63.5  0.00000001  Eggerthella lenta DSM 2243  Bacteria  normal  0.221092  normal  0.129145 
 
 
-
 
NC_013170  Ccur_12490  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  28.46 
 
 
560 aa  63.2  0.00000001  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0615  transcriptional regulator, LuxR family  29.63 
 
 
462 aa  62.8  0.00000002  Eggerthella lenta DSM 2243  Bacteria  unclonable  0.000000110739  normal 
 
 
-
 
NC_013204  Elen_2108  transcriptional regulator, LuxR family  30.93 
 
 
516 aa  62.8  0.00000002  Eggerthella lenta DSM 2243  Bacteria  hitchhiker  0.00926757  normal  0.183235 
 
 
-
 
NC_013204  Elen_2816  transcriptional regulator, LuxR family  46.67 
 
 
471 aa  62.4  0.00000002  Eggerthella lenta DSM 2243  Bacteria  normal  0.138304  hitchhiker  0.00338242 
 
 
-
 
NC_013165  Shel_11580  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  49.09 
 
 
515 aa  62  0.00000002  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.937657  normal 
 
 
-
 
NC_013165  Shel_13310  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  44.26 
 
 
469 aa  61.6  0.00000003  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.0175254  normal 
 
 
-
 
NC_013165  Shel_16610  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  32.99 
 
 
491 aa  61.6  0.00000003  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.0119595  normal  0.714327 
 
 
-
 
NC_013170  Ccur_02050  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  49.21 
 
 
541 aa  62  0.00000003  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2290  transcriptional regulator, LuxR family  50 
 
 
493 aa  59.7  0.0000001  Eggerthella lenta DSM 2243  Bacteria  normal  0.10968  normal 
 
 
-
 
NC_013235  Namu_3592  transcriptional regulator, LuxR family  51.85 
 
 
293 aa  59.3  0.0000001  Nakamurella multipartita DSM 44233  Bacteria  normal  0.0118916  normal  0.053603 
 
 
-
 
NC_013204  Elen_0520  transcriptional regulator, LuxR family  40.98 
 
 
520 aa  59.7  0.0000001  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.1412 
 
 
-
 
NC_013204  Elen_2693  transcriptional regulator, LuxR family  37.84 
 
 
80 aa  58.5  0.0000002  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013170  Ccur_13440  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  38.46 
 
 
509 aa  58.2  0.0000003  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_1438  response regulator receiver  50 
 
 
213 aa  57.8  0.0000005  Nocardioides sp. JS614  Bacteria  normal  0.494689  n/a   
 
 
-
 
NC_013165  Shel_23080  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  37.14 
 
 
545 aa  57.8  0.0000005  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.865531  normal 
 
 
-
 
NC_008148  Rxyl_3188  LuxR family transcriptional regulator  43.4 
 
 
368 aa  57.4  0.0000006  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.0110301  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>