More than 300 homologs were found in PanDaTox collection
for query gene Shel_00330 on replicon NC_013165
Organism: Slackia heliotrinireducens DSM 20476



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013165  Shel_00330  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  100 
 
 
240 aa  489  1e-137  Slackia heliotrinireducens DSM 20476  Bacteria  decreased coverage  0.00972196  normal 
 
 
-
 
NC_013170  Ccur_11690  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  97.02 
 
 
236 aa  464  1e-130  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.52451  normal 
 
 
-
 
NC_013204  Elen_0258  two component transcriptional regulator, winged helix family  94.89 
 
 
236 aa  456  1e-127  Eggerthella lenta DSM 2243  Bacteria  normal  0.606292  normal 
 
 
-
 
NC_013203  Apar_1349  two component transcriptional regulator, winged helix family  80.18 
 
 
237 aa  381  1e-105  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.421984 
 
 
-
 
NC_010320  Teth514_1155  two component transcriptional regulator  51.75 
 
 
231 aa  239  2e-62  Thermoanaerobacter sp. X514  Bacteria  decreased coverage  4.30064e-07  n/a   
 
 
-
 
NC_009012  Cthe_1847  two component transcriptional regulator  50.43 
 
 
234 aa  238  5e-62  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  1.21968e-06  n/a   
 
 
-
 
NC_013552  DhcVS_926  two-component system, OmpR family, response regulator  53.3 
 
 
227 aa  236  3e-61  Dehalococcoides sp. VS  Bacteria  hitchhiker  0.00200634  n/a   
 
 
-
 
NC_010320  Teth514_0766  two component transcriptional regulator  51.1 
 
 
231 aa  235  4e-61  Thermoanaerobacter sp. X514  Bacteria  normal  0.585906  n/a   
 
 
-
 
NC_013205  Aaci_1104  two component transcriptional regulator, winged helix family  53.36 
 
 
233 aa  231  6e-60  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1367  two component transcriptional regulator, winged helix family  52.47 
 
 
230 aa  230  1e-59  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  1.77207e-07  n/a   
 
 
-
 
NC_009455  DehaBAV1_0937  two component transcriptional regulator  52.89 
 
 
227 aa  229  3e-59  Dehalococcoides sp. BAV1  Bacteria  normal  0.834094  n/a   
 
 
-
 
NC_008148  Rxyl_2983  two component transcriptional regulator  52.23 
 
 
228 aa  229  4e-59  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_0916  two component transcriptional regulator, winged helix family  48.71 
 
 
234 aa  228  8e-59  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.0276045  hitchhiker  9.72711e-18 
 
 
-
 
NC_013131  Caci_8215  two component transcriptional regulator, winged helix family  53.36 
 
 
226 aa  227  1e-58  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_2782  two component transcriptional regulator  49.78 
 
 
231 aa  226  2e-58  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.92379  normal 
 
 
-
 
NC_011898  Ccel_1714  two component transcriptional regulator, winged helix family  49.12 
 
 
234 aa  226  3e-58  Clostridium cellulolyticum H10  Bacteria  normal  0.233786  n/a   
 
 
-
 
NC_011830  Dhaf_3739  two component transcriptional regulator, winged helix family  51.79 
 
 
230 aa  226  3e-58  Desulfitobacterium hafniense DCB-2  Bacteria  decreased coverage  4.66515e-11  n/a   
 
 
-
 
NC_002936  DET1058  DNA-binding response regulator  50.66 
 
 
227 aa  226  4e-58  Dehalococcoides ethenogenes 195  Bacteria  decreased coverage  0.000187393  n/a   
 
 
-
 
NC_013385  Adeg_1028  two component transcriptional regulator, winged helix family  50.87 
 
 
237 aa  225  5e-58  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_0960  two component transcriptional regulator  51.72 
 
 
236 aa  225  5e-58  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.0214647 
 
 
-
 
NC_010001  Cphy_2121  two component transcriptional regulator  48.89 
 
 
231 aa  224  1e-57  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_0700  two component transcriptional regulator, winged helix family  50.67 
 
 
226 aa  221  8e-57  Thermomonospora curvata DSM 43183  Bacteria  normal  0.768939  n/a   
 
 
-
 
NC_011899  Hore_13280  two component transcriptional regulator, winged helix family  48 
 
 
227 aa  220  2e-56  Halothermothrix orenii H 168  Bacteria  hitchhiker  5.36961e-08  n/a   
 
 
-
 
NC_014165  Tbis_0499  winged helix family two component transcriptional regulator  50.22 
 
 
229 aa  220  2e-56  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_012803  Mlut_03750  PhoP-like protein  49.33 
 
 
226 aa  219  3e-56  Micrococcus luteus NCTC 2665  Bacteria  normal  0.181369  n/a   
 
 
-
 
NC_009523  RoseRS_3485  two component transcriptional regulator  50.87 
 
 
236 aa  219  4e-56  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU2145  DNA-binding response regulator  48.65 
 
 
232 aa  218  6e-56  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_0961  response regulator receiver protein  48.9 
 
 
229 aa  217  1e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_6145  two component transcriptional regulator  50.67 
 
 
228 aa  217  2e-55  Frankia sp. EAN1pec  Bacteria  normal  normal  0.788201 
 
 
-
 
NC_008699  Noca_4046  response regulator receiver  50 
 
 
225 aa  214  6e-55  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_2358  two component transcriptional regulator  46.72 
 
 
231 aa  214  7e-55  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.0136772  n/a   
 
 
-
 
NC_013947  Snas_0580  two component transcriptional regulator, winged helix family  48.43 
 
 
226 aa  214  9e-55  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_008607  Ppro_3691  two component transcriptional regulator  48.21 
 
 
230 aa  214  9e-55  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_013171  Apre_1215  two component transcriptional regulator, winged helix family  45.69 
 
 
237 aa  214  1e-54  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_0070  two component transcriptional regulator  49.11 
 
 
229 aa  213  2e-54  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal  0.834843 
 
 
-
 
NC_011899  Hore_04710  two component transcriptional regulator, winged helix family  45.65 
 
 
237 aa  213  2e-54  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_4322  two component transcriptional regulator, winged helix family  49.56 
 
 
231 aa  213  3e-54  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_0088  two component transcriptional regulator  49.55 
 
 
228 aa  212  3e-54  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_007644  Moth_0827  two component transcriptional regulator  50.66 
 
 
256 aa  212  4e-54  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.00211389  normal  0.244563 
 
 
-
 
NC_007333  Tfu_2910  response regulator receiver  49.78 
 
 
230 aa  212  4e-54  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_3703  two component transcriptional regulator  48.26 
 
 
232 aa  212  5e-54  Saccharophagus degradans 2-40  Bacteria  normal  0.230236  normal  0.0884672 
 
 
-
 
NC_010320  Teth514_0588  two component transcriptional regulator  48.25 
 
 
227 aa  211  7e-54  Thermoanaerobacter sp. X514  Bacteria  unclonable  4.51147e-10  n/a   
 
 
-
 
NC_007413  Ava_3369  two component transcriptional regulator  48.07 
 
 
250 aa  210  1e-53  Anabaena variabilis ATCC 29413  Bacteria  normal  0.881494  normal  0.845013 
 
 
-
 
NC_011831  Cagg_3302  two component transcriptional regulator, winged helix family  47.35 
 
 
231 aa  210  1e-53  Chloroflexus aggregans DSM 9485  Bacteria  normal  hitchhiker  0.000343135 
 
 
-
 
NC_013947  Snas_0721  two component transcriptional regulator, winged helix family  52.68 
 
 
233 aa  210  1e-53  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.811558  normal 
 
 
-
 
NC_010424  Daud_1897  two component transcriptional regulator  51.12 
 
 
227 aa  210  2e-53  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.151466  n/a   
 
 
-
 
NC_013159  Svir_02690  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  48.67 
 
 
229 aa  210  2e-53  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_2709  two component transcriptional regulator, winged helix family  48.7 
 
 
236 aa  209  2e-53  Chloroflexus aggregans DSM 9485  Bacteria  decreased coverage  0.0011921  normal 
 
 
-
 
NC_009253  Dred_1903  two component transcriptional regulator  48.23 
 
 
230 aa  209  3e-53  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_2219  two component transcriptional regulator, winged helix family  49.13 
 
 
240 aa  209  3e-53  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_4602  two component transcriptional regulator, winged helix family  50.45 
 
 
226 aa  209  3e-53  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_09290  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  50.45 
 
 
229 aa  209  4e-53  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_0080  two component transcriptional regulator, winged helix family  48.42 
 
 
230 aa  208  6e-53  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_2914  two component transcriptional regulator  49.08 
 
 
245 aa  208  7e-53  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.634998  n/a   
 
 
-
 
NC_011898  Ccel_2106  two component transcriptional regulator, winged helix family  46.75 
 
 
238 aa  208  8e-53  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_2981  two component transcriptional regulator  47.53 
 
 
229 aa  208  8e-53  Desulfotomaculum reducens MI-1  Bacteria  unclonable  2.01285e-08  n/a   
 
 
-
 
NC_003909  BCE_1413  DNA-binding response regulator  46.19 
 
 
223 aa  207  1e-52  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A1453  DNA-binding response regulator  46.19 
 
 
223 aa  207  1e-52  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_3000  two component transcriptional regulator, winged helix family  49.08 
 
 
234 aa  207  1e-52  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_0264  two component transcriptional regulator  43.61 
 
 
238 aa  207  1e-52  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.392693  n/a   
 
 
-
 
NC_011891  A2cp1_3106  two component transcriptional regulator, winged helix family  49.08 
 
 
234 aa  206  2e-52  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_0471  two component transcriptional regulator  51.12 
 
 
226 aa  205  5e-52  Frankia sp. CcI3  Bacteria  normal  normal  0.734397 
 
 
-
 
NC_014212  Mesil_0142  two component transcriptional regulator, winged helix family  49.33 
 
 
221 aa  205  5e-52  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.709604 
 
 
-
 
NC_010718  Nther_1220  two component transcriptional regulator, winged helix family  48.02 
 
 
233 aa  205  5e-52  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  hitchhiker  0.00991602 
 
 
-
 
NC_011725  BCB4264_A1351  DNA-binding response regulator  45.74 
 
 
223 aa  205  6e-52  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_0724  two component transcriptional regulator  48.43 
 
 
226 aa  204  7e-52  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_1100  two component transcriptional regulator, winged helix family  49.34 
 
 
236 aa  204  7e-52  Chloroflexus aggregans DSM 9485  Bacteria  normal  unclonable  1.82155e-08 
 
 
-
 
NC_011773  BCAH820_1389  DNA-binding response regulator  45.74 
 
 
223 aa  204  7e-52  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_005957  BT9727_1191  response regulator  46.64 
 
 
223 aa  205  7e-52  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK1193  response regulator  45.74 
 
 
223 aa  204  7e-52  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_014248  Aazo_2741  winged helix family two component transcriptional regulator  46.78 
 
 
250 aa  204  8e-52  'Nostoc azollae' 0708  Bacteria  normal  0.0957275  n/a   
 
 
-
 
NC_007530  GBAA_1312  DNA-binding response regulator  45.74 
 
 
223 aa  204  9e-52  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_0093  two component transcriptional regulator, winged helix family  46.32 
 
 
232 aa  204  9e-52  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS1213  DNA-binding response regulator  45.74 
 
 
223 aa  204  9e-52  Bacillus anthracis str. Sterne  Bacteria  normal  0.203275  n/a   
 
 
-
 
NC_011772  BCG9842_B3993  DNA-binding response regulator  45.74 
 
 
223 aa  204  1e-51  Bacillus cereus G9842  Bacteria  normal  normal  0.910988 
 
 
-
 
NC_010816  BLD_1073  putative response regulator  45.26 
 
 
234 aa  204  1e-51  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_013169  Ksed_03700  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  45.29 
 
 
226 aa  204  1e-51  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal  0.132847 
 
 
-
 
NC_011729  PCC7424_3600  two component transcriptional regulator, winged helix family  45.8 
 
 
250 aa  203  2e-51  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  0.00284005 
 
 
-
 
NC_010424  Daud_1419  two component transcriptional regulator  48.02 
 
 
231 aa  203  2e-51  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.0720218  n/a   
 
 
-
 
NC_008554  Sfum_2892  two component transcriptional regulator  48.44 
 
 
227 aa  203  2e-51  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.0239565 
 
 
-
 
NC_013093  Amir_6749  two component transcriptional regulator, winged helix family  47.09 
 
 
226 aa  203  2e-51  Actinosynnema mirum DSM 43827  Bacteria  normal  0.290774  n/a   
 
 
-
 
NC_008148  Rxyl_0378  two component transcriptional regulator  46.29 
 
 
234 aa  202  3e-51  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_1288  two component transcriptional regulator  46.49 
 
 
228 aa  202  3e-51  Clostridium thermocellum ATCC 27405  Bacteria  decreased coverage  1.28008e-09  n/a   
 
 
-
 
NC_013411  GYMC61_1696  two component transcriptional regulator, winged helix family  43.95 
 
 
224 aa  202  4e-51  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011886  Achl_0850  two component transcriptional regulator, winged helix family  47.98 
 
 
226 aa  202  4e-51  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013385  Adeg_0644  two component transcriptional regulator, winged helix family  47.3 
 
 
236 aa  202  5e-51  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_0657  two component transcriptional regulator, winged helix family  49.78 
 
 
235 aa  202  5e-51  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.118815  hitchhiker  0.000311431 
 
 
-
 
NC_013595  Sros_0132  response regulator receiver protein  48.26 
 
 
231 aa  201  6e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_010180  BcerKBAB4_5511  two component transcriptional regulator  46.93 
 
 
236 aa  201  6e-51  Bacillus weihenstephanensis KBAB4  Bacteria  normal  normal  0.567595 
 
 
-
 
NC_010184  BcerKBAB4_1215  two component transcriptional regulator  45.5 
 
 
223 aa  201  7e-51  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.533573  n/a   
 
 
-
 
NC_013205  Aaci_1728  two component transcriptional regulator, winged helix family  48.02 
 
 
233 aa  201  7e-51  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_0393  two component transcriptional regulator, winged helix family  48.66 
 
 
227 aa  201  7e-51  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.202895 
 
 
-
 
NC_010511  M446_3564  two component transcriptional regulator  49.1 
 
 
230 aa  201  7e-51  Methylobacterium sp. 4-46  Bacteria  normal  0.153344  normal  0.125376 
 
 
-
 
NC_006368  lpp1393  transcriptional regulatory protein CpxR  43.75 
 
 
226 aa  201  7e-51  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_009972  Haur_4663  two component transcriptional regulator  49.11 
 
 
232 aa  201  8e-51  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_006369  lpl1603  transcriptional regulatory protein CpxR  43.75 
 
 
226 aa  201  1e-50  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_009674  Bcer98_1021  two component transcriptional regulator  46.64 
 
 
223 aa  201  1e-50  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_3061  two component transcriptional regulator  47.56 
 
 
227 aa  200  1e-50  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.799336  n/a   
 
 
-
 
NC_011899  Hore_21640  two component transcriptional regulator, winged helix family  47.79 
 
 
226 aa  200  1e-50  Halothermothrix orenii H 168  Bacteria  hitchhiker  1.76926e-11  n/a   
 
 
-
 
NC_011729  PCC7424_2845  two component transcriptional regulator, winged helix family  47.86 
 
 
234 aa  200  1e-50  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
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