31 homologs were found in PanDaTox collection
for query gene Sfum_3500 on replicon NC_008554
Organism: Syntrophobacter fumaroxidans MPOB



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008554  Sfum_3500  HAD family hydrolase  100 
 
 
267 aa  551  1e-156  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.126173 
 
 
-
 
NC_009636  Smed_2700  HAD family hydrolase  53.12 
 
 
270 aa  271  1e-71  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_1184  HAD-superfamily hydrolase, subfamily IIB  49.41 
 
 
297 aa  253  3e-66  Ralstonia pickettii 12D  Bacteria  normal  0.24726  normal 
 
 
-
 
NC_010682  Rpic_1091  HAD-superfamily hydrolase, subfamily IIB  49.01 
 
 
297 aa  251  9e-66  Ralstonia pickettii 12J  Bacteria  normal  0.024164  normal 
 
 
-
 
NC_003295  RSc1263  hypothetical protein  49.41 
 
 
295 aa  250  2e-65  Ralstonia solanacearum GMI1000  Bacteria  normal  0.151023  normal  0.478475 
 
 
-
 
NC_007973  Rmet_2056  HAD family hydrolase  49.21 
 
 
268 aa  244  8e-64  Cupriavidus metallidurans CH34  Bacteria  normal  0.413042  normal 
 
 
-
 
NC_007347  Reut_A2053  HAD family hydrolase  48.22 
 
 
287 aa  239  3e-62  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_4690  HAD-superfamily hydrolase, subfamily IIB  44.49 
 
 
275 aa  209  4e-53  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_0644  HAD family hydrolase  43.91 
 
 
283 aa  202  5e-51  Rhodoferax ferrireducens T118  Bacteria  normal  0.123589  n/a   
 
 
-
 
NC_010002  Daci_5932  HAD family hydrolase  41.53 
 
 
265 aa  199  6e-50  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_4133  HAD family hydrolase  41.5 
 
 
271 aa  198  8e-50  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_0616  HAD family hydrolase  41.79 
 
 
278 aa  186  2e-46  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_0595  HAD-superfamily hydrolase, subfamily IIB  42.38 
 
 
278 aa  186  3e-46  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_010581  Bind_2219  HAD family hydrolase  37.7 
 
 
259 aa  184  1e-45  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_008347  Mmar10_0769  HAD family hydrolase  39.04 
 
 
257 aa  182  6e-45  Maricaulis maris MCS10  Bacteria  normal  0.0183682  normal  0.618821 
 
 
-
 
NC_012848  Rleg_5210  HAD-superfamily hydrolase, subfamily IIB  38 
 
 
281 aa  181  9e-45  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.43756 
 
 
-
 
NC_009654  Mmwyl1_0610  HAD family hydrolase  39.16 
 
 
282 aa  175  8e-43  Marinomonas sp. MWYL1  Bacteria  normal  hitchhiker  1.52168e-06 
 
 
-
 
NC_008752  Aave_4067  HAD family hydrolase  38.63 
 
 
301 aa  159  4e-38  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_008544  Bcen2424_6271  HAD family hydrolase  33.2 
 
 
263 aa  157  2e-37  Burkholderia cenocepacia HI2424  Bacteria  normal  0.274563  normal  0.690052 
 
 
-
 
NC_008060  Bcen_1558  HAD family hydrolase  33.2 
 
 
263 aa  157  2e-37  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_2097  HAD family hydrolase  32.33 
 
 
268 aa  156  3e-37  Psychromonas ingrahamii 37  Bacteria  normal  0.978592  normal  0.811139 
 
 
-
 
NC_010512  Bcenmc03_6760  HAD family hydrolase  32.81 
 
 
263 aa  152  5e-36  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_009784  VIBHAR_06400  hypothetical protein  31.11 
 
 
274 aa  151  1e-35  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013440  Hoch_5196  HAD-superfamily hydrolase, subfamily IIB  32.17 
 
 
278 aa  129  4e-29  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_008312  Tery_3874  HAD family hydrolase  27.34 
 
 
260 aa  105  7e-22  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.0597322 
 
 
-
 
NC_007413  Ava_3590  HAD family hydrolase  28.19 
 
 
270 aa  100  3e-20  Anabaena variabilis ATCC 29413  Bacteria  normal  0.684772  normal  0.0477257 
 
 
-
 
NC_011884  Cyan7425_5151  HAD-superfamily hydrolase, subfamily IIB  27.41 
 
 
321 aa  90.9  2e-17  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_0088  HAD-superfamily hydrolase, subfamily IIB  26.38 
 
 
265 aa  90.5  3e-17  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0509044 
 
 
-
 
NC_007604  Synpcc7942_0566  HAD family hydrolase  26.59 
 
 
251 aa  75.1  1e-12  Synechococcus elongatus PCC 7942  Bacteria  normal  normal  0.0688357 
 
 
-
 
NC_007969  Pcryo_2159  Cof protein  31.31 
 
 
268 aa  42.7  0.006  Psychrobacter cryohalolentis K5  Bacteria  normal  normal 
 
 
-
 
NC_007204  Psyc_1870  class II-B haloacid dehalogenase  32.67 
 
 
265 aa  42.4  0.008  Psychrobacter arcticus 273-4  Bacteria  normal  0.791968  normal  0.480034 
 
 
-
 
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