12 homologs were found in PanDaTox collection
for query gene Sfri_2090 on replicon NC_008345
Organism: Shewanella frigidimarina NCIMB 400



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008345  Sfri_2090  hypothetical protein  100 
 
 		 1138 aa  2355    Shewanella frigidimarina NCIMB 400  Bacteria  decreased coverage  0.00173694  n/a   
 
 
-
 
NC_011138  MADE_00121  putative ATP-binding protein  40.42 
 
 		 1077 aa  728    Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.814389  n/a   
 
 
-
 
NC_008825  Mpe_A1181  putative ATP-binding protein  29.28 
 
 		 1110 aa  448  1.0000000000000001e-124  Methylibium petroleiphilum PM1  Bacteria  normal  0.562353  normal  0.115598 
 
 
-
 
NC_008826  Mpe_B0172  putative ATP-binding protein  29.28 
 
 		 1110 aa  448  1.0000000000000001e-124  Methylibium petroleiphilum PM1  Bacteria  normal  1  hitchhiker  0.000291246 
 
 
-
 
NC_008758  Pnap_4584  putative ATP-binding protein  29.58 
 
 		 1111 aa  431  1e-119  Polaromonas naphthalenivorans CJ2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011662  Tmz1t_2113  putative ATP-binding protein  31.61 
 
 		 884 aa  405  1e-111  Thauera sp. MZ1T  Bacteria  normal  0.555266  n/a   
 
 
-
 
NC_007410  Ava_B0311  hypothetical protein  22.92 
 
 		 1168 aa  231  4e-59  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0120008  n/a   
 
 
-
 
NC_009507  Swit_5328  hypothetical protein  22.51 
 
 		 1155 aa  230  1e-58  Sphingomonas wittichii RW1  Bacteria  normal  1  normal  0.151997 
 
 
-
 
NC_013093  Amir_0591  hypothetical protein  24.01 
 
 		 1192 aa  206  2e-51  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_009441  Fjoh_3012  hypothetical protein  24.45 
 
 		 1071 aa  203  9.999999999999999e-51  Flavobacterium johnsoniae UW101  Bacteria  normal  0.810934  n/a   
 
 
-
 
NC_013595  Sros_8685  hypothetical protein  22.44 
 
 		 1205 aa  178  4e-43  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011894  Mnod_0641  hypothetical protein  20.41 
 
 		 976 aa  97.1  2e-18  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
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