More than 300 homologs were found in PanDaTox collection
for query gene Sfri_1899 on replicon NC_008345
Organism: Shewanella frigidimarina NCIMB 400



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008345  Sfri_1899  HAD family hydrolase  100 
 
 
233 aa  481  1e-135  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.629061  n/a   
 
 
-
 
NC_009049  Rsph17029_1725  HAD family hydrolase  47.09 
 
 
228 aa  198  6e-50  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_007493  RSP_0089  hypothetical protein  46.64 
 
 
228 aa  196  3e-49  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.16166  n/a   
 
 
-
 
NC_009428  Rsph17025_1679  HAD family hydrolase  50 
 
 
228 aa  194  1e-48  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.329871  normal 
 
 
-
 
NC_008228  Patl_4120  HAD family hydrolase  43.61 
 
 
237 aa  181  6e-45  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_02312  putative unknown enzyme  40.99 
 
 
224 aa  172  5e-42  Alteromonas macleodii 'Deep ecotype'  Bacteria  hitchhiker  0.00322256  n/a   
 
 
-
 
NC_010725  Mpop_3493  HAD-superfamily hydrolase, subfamily IA, variant 3  45.65 
 
 
228 aa  164  1.0000000000000001e-39  Methylobacterium populi BJ001  Bacteria  normal  normal  0.292984 
 
 
-
 
NC_011894  Mnod_1142  HAD-superfamily hydrolase, subfamily IA, variant 3  45.5 
 
 
231 aa  161  7e-39  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.513371  n/a   
 
 
-
 
NC_010505  Mrad2831_4509  HAD family hydrolase  42.25 
 
 
225 aa  154  1e-36  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_3293  HAD family hydrolase  45.11 
 
 
245 aa  154  1e-36  Methylobacterium extorquens PA1  Bacteria  normal  0.567903  normal  0.782847 
 
 
-
 
NC_011757  Mchl_3616  HAD-superfamily hydrolase, subfamily IA, variant 3  44.57 
 
 
228 aa  152  4e-36  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_3573  hypothetical protein  39.18 
 
 
224 aa  152  5e-36  Agrobacterium vitis S4  Bacteria  normal  0.141866  n/a   
 
 
-
 
NC_010511  M446_2179  HAD family hydrolase  44.86 
 
 
223 aa  149  3e-35  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.812633 
 
 
-
 
NC_004311  BRA0969  HAD superfamily hydrolase  38.79 
 
 
223 aa  146  3e-34  Brucella suis 1330  Bacteria  normal  0.512298  n/a   
 
 
-
 
NC_009504  BOV_A0909  HAD superfamily hydrolase  38.79 
 
 
223 aa  146  3e-34  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_2352  HAD family hydrolase  40.11 
 
 
222 aa  146  3e-34  Sinorhizobium medicae WSM419  Bacteria  decreased coverage  0.00492029  normal 
 
 
-
 
NC_009485  BBta_0045  putative haloacid dehalogenase-like hydrolase  40.21 
 
 
232 aa  145  4.0000000000000006e-34  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.605496  normal  0.617373 
 
 
-
 
NC_012850  Rleg_3747  HAD-superfamily hydrolase, subfamily IA, variant 3  43.92 
 
 
229 aa  144  1e-33  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.422409  normal 
 
 
-
 
NC_010508  Bcenmc03_2716  HAD family hydrolase  36.27 
 
 
228 aa  143  2e-33  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008060  Bcen_2076  HAD family hydrolase  36.27 
 
 
244 aa  144  2e-33  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.140944  n/a   
 
 
-
 
NC_008542  Bcen2424_2687  HAD family hydrolase  36.27 
 
 
244 aa  144  2e-33  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_3783  HAD family hydrolase  39.04 
 
 
242 aa  142  4e-33  Chelativorans sp. BNC1  Bacteria  normal  0.0711244  n/a   
 
 
-
 
NC_009667  Oant_1388  HAD family hydrolase  38.32 
 
 
223 aa  142  4e-33  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_010084  Bmul_0610  HAD family hydrolase  35.23 
 
 
260 aa  140  1.9999999999999998e-32  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_3445  HAD-superfamily hydrolase, subfamily IA, variant 3  44.32 
 
 
229 aa  139  3e-32  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_1543  HAD family hydrolase  37.36 
 
 
218 aa  139  4.999999999999999e-32  Methylobacillus flagellatus KT  Bacteria  normal  normal  0.290377 
 
 
-
 
NC_007778  RPB_0589  HAD family hydrolase  39.89 
 
 
217 aa  138  6e-32  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_0243  HAD family hydrolase  38.38 
 
 
217 aa  138  6e-32  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_0467  HAD family hydrolase  41.49 
 
 
219 aa  138  7e-32  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.577769 
 
 
-
 
NC_010681  Bphyt_3323  HAD-superfamily hydrolase, subfamily IA, variant 3  33.68 
 
 
228 aa  138  7.999999999999999e-32  Burkholderia phytofirmans PsJN  Bacteria  normal  0.866957  normal  0.157588 
 
 
-
 
NC_007510  Bcep18194_A6015  HAD family hydrolase  34.72 
 
 
228 aa  138  8.999999999999999e-32  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_007651  BTH_I0596  HAD-superfamily hydrolase  36.79 
 
 
240 aa  137  1e-31  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_0730  haloacid dehalogenase, IA family protein  36.27 
 
 
228 aa  136  3.0000000000000003e-31  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA0231  HAD-superfamily hydrolase  36.27 
 
 
228 aa  136  3.0000000000000003e-31  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2443  HAD-superfamily hydrolase  36.27 
 
 
228 aa  136  3.0000000000000003e-31  Burkholderia mallei NCTC 10247  Bacteria  normal  0.151709  n/a   
 
 
-
 
NC_007434  BURPS1710b_0896  HAD-superfamily hydrolase  36.27 
 
 
228 aa  136  3.0000000000000003e-31  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2715  HAD-superfamily hydrolase  36.27 
 
 
228 aa  136  3.0000000000000003e-31  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A2363  HAD-superfamily hydrolase  36.27 
 
 
228 aa  136  3.0000000000000003e-31  Burkholderia mallei NCTC 10229  Bacteria  normal  0.340076  n/a   
 
 
-
 
NC_009074  BURPS668_0716  haloacid dehalogenase, IA family protein  36.27 
 
 
228 aa  135  4e-31  Burkholderia pseudomallei 668  Bacteria  normal  0.93684  n/a   
 
 
-
 
NC_007604  Synpcc7942_0085  HAD family hydrolase  35.35 
 
 
228 aa  135  5e-31  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A0636  HAD family hydrolase  33.16 
 
 
252 aa  134  9e-31  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010622  Bphy_0418  HAD family hydrolase  35.23 
 
 
228 aa  133  1.9999999999999998e-30  Burkholderia phymatum STM815  Bacteria  normal  normal  0.513093 
 
 
-
 
NC_009441  Fjoh_4184  HAD family hydrolase  34.95 
 
 
212 aa  133  3e-30  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_008390  Bamb_2741  HAD family hydrolase  34.2 
 
 
240 aa  132  6e-30  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_1190  hypothetical protein  36.71 
 
 
204 aa  131  7.999999999999999e-30  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.995327  normal 
 
 
-
 
NC_012852  Rleg_6257  HAD-superfamily hydrolase, subfamily IA, variant 3  38.59 
 
 
240 aa  131  7.999999999999999e-30  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.766914 
 
 
-
 
NC_010551  BamMC406_2605  HAD family hydrolase  34.2 
 
 
240 aa  131  7.999999999999999e-30  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_004310  BR0489  HAD superfamily hydrolase  38.27 
 
 
228 aa  130  1.0000000000000001e-29  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009505  BOV_0493  phosphoglycolate phosphatase  38.27 
 
 
228 aa  130  1.0000000000000001e-29  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_0996  HAD family hydrolase  37.5 
 
 
219 aa  131  1.0000000000000001e-29  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.0106068 
 
 
-
 
NC_012848  Rleg_4948  HAD-superfamily hydrolase, subfamily IA, variant 3  37.63 
 
 
223 aa  130  2.0000000000000002e-29  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_009667  Oant_0603  HAD family hydrolase  37.44 
 
 
230 aa  129  4.0000000000000003e-29  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.432882  n/a   
 
 
-
 
NC_008687  Pden_4176  HAD family hydrolase  41.4 
 
 
218 aa  129  5.0000000000000004e-29  Paracoccus denitrificans PD1222  Bacteria  normal  0.767688  normal 
 
 
-
 
NC_009952  Dshi_0545  HAD-superfamily hydrolase  33.63 
 
 
246 aa  128  7.000000000000001e-29  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_2303  HAD family hydrolase  37.5 
 
 
230 aa  128  7.000000000000001e-29  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.432343  normal  0.0684019 
 
 
-
 
NC_011004  Rpal_0453  HAD-superfamily hydrolase, subfamily IA, variant 3  38.22 
 
 
219 aa  127  2.0000000000000002e-28  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_5021  HAD-superfamily hydrolase, subfamily IA, variant 3  36.67 
 
 
223 aa  125  4.0000000000000003e-28  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.886555  normal  0.11436 
 
 
-
 
NC_013947  Snas_5789  HAD-superfamily hydrolase subfamily IA, variant 3  36.61 
 
 
248 aa  126  4.0000000000000003e-28  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.805096 
 
 
-
 
NC_007912  Sde_3367  isochorismate synthase  38.46 
 
 
208 aa  125  5e-28  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0514575 
 
 
-
 
NC_008463  PA14_07310  putative hydrolase  32.23 
 
 
224 aa  124  1e-27  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.642028  normal  0.985429 
 
 
-
 
NC_008783  BARBAKC583_0412  HAD family hydrolase  33.33 
 
 
230 aa  124  1e-27  Bartonella bacilliformis KC583  Bacteria  normal  0.983661  n/a   
 
 
-
 
NC_010681  Bphyt_3243  HAD-superfamily hydrolase, subfamily IA, variant 3  38.34 
 
 
237 aa  123  2e-27  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0124526  normal  0.9958 
 
 
-
 
NC_007413  Ava_0109  HAD family hydrolase  35.56 
 
 
223 aa  123  2e-27  Anabaena variabilis ATCC 29413  Bacteria  normal  decreased coverage  0.00453013 
 
 
-
 
NC_009656  PSPA7_0665  haloacid dehalogenase, IA family protein  32.23 
 
 
231 aa  124  2e-27  Pseudomonas aeruginosa PA7  Bacteria  normal  0.233376  n/a   
 
 
-
 
NC_013739  Cwoe_5532  HAD-superfamily hydrolase, subfamily IA, variant 3  36.76 
 
 
214 aa  121  9e-27  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_0539  HAD family hydrolase  34.18 
 
 
231 aa  121  9e-27  Sinorhizobium medicae WSM419  Bacteria  normal  0.598939  normal  0.598645 
 
 
-
 
NC_012850  Rleg_0694  HAD-superfamily hydrolase, subfamily IA, variant 3  34.69 
 
 
229 aa  119  3e-26  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_0637  HAD-superfamily hydrolase, subfamily IA, variant 3  34.87 
 
 
229 aa  119  3e-26  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.872179  normal  0.213307 
 
 
-
 
NC_007347  Reut_A0142  HAD family hydrolase  36.22 
 
 
235 aa  119  4.9999999999999996e-26  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A0723  HAD family hydrolase  36.6 
 
 
240 aa  118  7.999999999999999e-26  Burkholderia xenovorans LB400  Bacteria  normal  0.272248  normal 
 
 
-
 
NC_011989  Avi_1080  hypothetical protein  35.18 
 
 
229 aa  117  9.999999999999999e-26  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_2542  HAD family hydrolase  34.05 
 
 
214 aa  117  9.999999999999999e-26  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.214098 
 
 
-
 
NC_013739  Cwoe_3250  HAD-superfamily hydrolase, subfamily IA, variant 3  32.39 
 
 
223 aa  117  9.999999999999999e-26  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.313411 
 
 
-
 
NC_007948  Bpro_4494  HAD family hydrolase  35.48 
 
 
217 aa  116  1.9999999999999998e-25  Polaromonas sp. JS666  Bacteria  normal  normal  0.901613 
 
 
-
 
NC_009667  Oant_0642  HAD family hydrolase  36.61 
 
 
255 aa  115  5e-25  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.911495  n/a   
 
 
-
 
NC_013457  VEA_000204  putative phosphatase YieH  32.66 
 
 
222 aa  115  6.9999999999999995e-25  Vibrio sp. Ex25  Bacteria  normal  0.30106  n/a   
 
 
-
 
NC_007413  Ava_0113  HAD family hydrolase  34.27 
 
 
215 aa  114  8.999999999999998e-25  Anabaena variabilis ATCC 29413  Bacteria  normal  0.254082  normal  0.189909 
 
 
-
 
NC_007963  Csal_0268  HAD family hydrolase  33.15 
 
 
225 aa  114  2.0000000000000002e-24  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_2743  HAD family hydrolase  34.44 
 
 
227 aa  114  2.0000000000000002e-24  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.994994  normal  0.0511558 
 
 
-
 
NC_009429  Rsph17025_3578  hypothetical protein  33.68 
 
 
227 aa  112  6e-24  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_009076  BURPS1106A_0879  HAD family hydrolase  35.29 
 
 
232 aa  112  7.000000000000001e-24  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_1038  HAD-superfamily hydrolase  35.29 
 
 
232 aa  112  7.000000000000001e-24  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_0762  HAD family hydrolase  33.04 
 
 
229 aa  112  7.000000000000001e-24  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_4007  6-phosphogluconate phosphatase  28.49 
 
 
222 aa  112  7.000000000000001e-24  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA0336  HAD-superfamily hydrolase  35.29 
 
 
232 aa  111  8.000000000000001e-24  Burkholderia mallei ATCC 23344  Bacteria  normal  0.438572  n/a   
 
 
-
 
NC_009080  BMA10247_0082  HAD family hydrolase  35.29 
 
 
232 aa  111  8.000000000000001e-24  Burkholderia mallei NCTC 10247  Bacteria  normal  0.0196618  n/a   
 
 
-
 
NC_008785  BMASAVP1_A0634  HAD-superfamily hydrolase  35.29 
 
 
232 aa  111  8.000000000000001e-24  Burkholderia mallei SAVP1  Bacteria  normal  0.535941  n/a   
 
 
-
 
NC_008836  BMA10229_A2468  HAD-superfamily hydrolase  35.29 
 
 
232 aa  111  8.000000000000001e-24  Burkholderia mallei NCTC 10229  Bacteria  normal  0.273983  n/a   
 
 
-
 
NC_012560  Avin_11460  HAD-superfamily hydrolase, subfamily IA, variant 3  34.22 
 
 
233 aa  111  1.0000000000000001e-23  Azotobacter vinelandii DJ  Bacteria  normal  0.0237278  n/a   
 
 
-
 
NC_007651  BTH_I0698  HAD-superfamily hydrolase  33.82 
 
 
232 aa  110  2.0000000000000002e-23  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_008390  Bamb_2640  HAD family hydrolase  35.29 
 
 
237 aa  110  2.0000000000000002e-23  Burkholderia ambifaria AMMD  Bacteria  normal  0.576989  n/a   
 
 
-
 
NC_009074  BURPS668_0875  HAD family hydrolase  34 
 
 
232 aa  109  3e-23  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_4216  6-phosphogluconate phosphatase  29.03 
 
 
223 aa  109  3e-23  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_0122  HAD-superfamily hydrolase, subfamily IA, variant 3  36.02 
 
 
229 aa  108  8.000000000000001e-23  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_0130  HAD-superfamily hydrolase, subfamily IA, variant 3  36.02 
 
 
232 aa  108  9.000000000000001e-23  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010551  BamMC406_2508  HAD family hydrolase  35.14 
 
 
237 aa  107  1e-22  Burkholderia ambifaria MC40-6  Bacteria  normal  0.076946  normal  0.415446 
 
 
-
 
NC_002977  MCA0959  HAD-superfamily hydrolase, subfamily IA, variant 3 family protein  34.9 
 
 
216 aa  106  2e-22  Methylococcus capsulatus str. Bath  Bacteria  normal  0.0734377  n/a   
 
 
-
 
NC_003295  RSc2141  hypothetical protein  34.08 
 
 
232 aa  106  2e-22  Ralstonia solanacearum GMI1000  Bacteria  decreased coverage  0.00191152  normal 
 
 
-
 
NC_007510  Bcep18194_A5923  HAD family hydrolase  35.68 
 
 
228 aa  107  2e-22  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_008025  Dgeo_1330  HAD family hydrolase  32.98 
 
 
230 aa  107  2e-22  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>