More than 300 homologs were found in PanDaTox collection
for query gene Sfri_0080 on replicon NC_008345
Organism: Shewanella frigidimarina NCIMB 400



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011663  Sbal223_0279  methyl-accepting chemotaxis sensory transducer  80.19 
 
 
638 aa  990    Shewanella baltica OS223  Bacteria  normal  0.983838  normal 
 
 
-
 
NC_009831  Ssed_4404  methyl-accepting chemotaxis sensory transducer  77.2 
 
 
638 aa  984    Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.0156105 
 
 
-
 
NC_008700  Sama_3522  putative methyl-accepting chemotaxis sensory transducer  73.43 
 
 
636 aa  887    Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_4454  methyl-accepting chemotaxis protein  79.56 
 
 
642 aa  982    Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009052  Sbal_0282  methyl-accepting chemotaxis sensory transducer  80.19 
 
 
641 aa  991    Shewanella baltica OS155  Bacteria  normal  0.0149105  n/a   
 
 
-
 
NC_010506  Swoo_4795  methyl-accepting chemotaxis sensory transducer  75.47 
 
 
638 aa  958    Shewanella woodyi ATCC 51908  Bacteria  normal  0.884167  hitchhiker  0.000462611 
 
 
-
 
NC_009438  Sputcn32_0387  methyl-accepting chemotaxis sensory transducer  80.19 
 
 
638 aa  987    Shewanella putrefaciens CN-32  Bacteria  normal  0.408395  n/a   
 
 
-
 
NC_007954  Sden_0099  chemotaxis sensory transducer  80.5 
 
 
639 aa  1026    Shewanella denitrificans OS217  Bacteria  unclonable  0.0000000152719  n/a   
 
 
-
 
NC_008321  Shewmr4_0271  methyl-accepting chemotaxis sensory transducer  78.93 
 
 
638 aa  978    Shewanella sp. MR-4  Bacteria  normal  0.758035  hitchhiker  0.0000678809 
 
 
-
 
NC_009665  Shew185_0275  methyl-accepting chemotaxis sensory transducer  80.19 
 
 
638 aa  992    Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_0085  methyl-accepting chemotaxis sensory transducer  72.8 
 
 
638 aa  943    Shewanella loihica PV-4  Bacteria  normal  0.0647334  normal 
 
 
-
 
NC_008322  Shewmr7_3750  methyl-accepting chemotaxis sensory transducer  79.25 
 
 
638 aa  981    Shewanella sp. MR-7  Bacteria  normal  0.666265  normal  0.186245 
 
 
-
 
NC_008345  Sfri_0080  methyl-accepting chemotaxis sensory transducer  100 
 
 
636 aa  1282    Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_0283  methyl-accepting chemotaxis sensory transducer  80.19 
 
 
638 aa  992    Shewanella baltica OS195  Bacteria  normal  0.411591  normal 
 
 
-
 
NC_008577  Shewana3_0272  methyl-accepting chemotaxis sensory transducer  79.56 
 
 
638 aa  985    Shewanella sp. ANA-3  Bacteria  decreased coverage  0.00090491  hitchhiker  0.000000349734 
 
 
-
 
NC_009456  VC0395_1102  methyl-accepting chemotaxis protein  51.02 
 
 
638 aa  617  1e-175  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_013457  VEA_001273  methyl-accepting chemotaxis protein  50.71 
 
 
638 aa  594  1e-168  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_05150  adenylyl cyclase class-3/4/guanylyl cyclase  51.33 
 
 
650 aa  593  1e-168  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011138  MADE_00464  methyl-accepting chemotaxis protein  45.04 
 
 
636 aa  548  1e-154  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_0604  methyl-accepting chemotaxis sensory transducer  41.98 
 
 
641 aa  472  1.0000000000000001e-131  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.471742  n/a   
 
 
-
 
NC_003910  CPS_1439  methyl-accepting chemotaxis protein  35.36 
 
 
641 aa  377  1e-103  Colwellia psychrerythraea 34H  Bacteria  normal  0.336763  n/a   
 
 
-
 
NC_009092  Shew_0596  methyl-accepting chemotaxis sensory transducer  35.19 
 
 
640 aa  374  1e-102  Shewanella loihica PV-4  Bacteria  normal  normal  0.270432 
 
 
-
 
NC_009831  Ssed_3856  methyl-accepting chemotaxis sensory transducer  34.32 
 
 
640 aa  365  2e-99  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.825575 
 
 
-
 
NC_009439  Pmen_0734  methyl-accepting chemotaxis sensory transducer  35.97 
 
 
643 aa  352  8.999999999999999e-96  Pseudomonas mendocina ymp  Bacteria  normal  0.770301  normal 
 
 
-
 
NC_010322  PputGB1_0343  methyl-accepting chemotaxis sensory transducer  34.53 
 
 
645 aa  345  2e-93  Pseudomonas putida GB-1  Bacteria  normal  0.675969  normal 
 
 
-
 
NC_010501  PputW619_4887  methyl-accepting chemotaxis sensory transducer  34.22 
 
 
645 aa  342  1e-92  Pseudomonas putida W619  Bacteria  normal  normal  0.658451 
 
 
-
 
NC_002947  PP_0320  methyl-accepting chemotaxis sensory transducer  34.22 
 
 
645 aa  341  2.9999999999999998e-92  Pseudomonas putida KT2440  Bacteria  normal  decreased coverage  0.0000409011 
 
 
-
 
NC_009512  Pput_0342  methyl-accepting chemotaxis sensory transducer  34.06 
 
 
645 aa  339  7e-92  Pseudomonas putida F1  Bacteria  normal  0.860801  normal 
 
 
-
 
NC_007492  Pfl01_0450  chemotaxis sensory transducer  33.39 
 
 
645 aa  329  9e-89  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_3534  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  35.4 
 
 
629 aa  313  5.999999999999999e-84  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.667463  normal  0.0882884 
 
 
-
 
NC_008463  PA14_56010  chemotactic transducer PctB  39.04 
 
 
629 aa  301  2e-80  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_4877  chemotactic transducer PctB  38.65 
 
 
629 aa  298  2e-79  Pseudomonas aeruginosa PA7  Bacteria  normal  0.164155  n/a   
 
 
-
 
NC_009456  VC0395_1007  hemolysin secretion protein HylB  53.4 
 
 
548 aa  298  3e-79  Vibrio cholerae O395  Bacteria  normal  0.702356  n/a   
 
 
-
 
NC_010501  PputW619_0425  methyl-accepting chemotaxis sensory transducer with Cache sensor  36 
 
 
630 aa  294  4e-78  Pseudomonas putida W619  Bacteria  normal  0.461628  normal 
 
 
-
 
NC_007492  Pfl01_4431  chemotaxis sensory transducer, Cache sensor  36.48 
 
 
629 aa  293  7e-78  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_56000  chemotactic transducer PctA  36.89 
 
 
629 aa  290  6e-77  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0512673  normal 
 
 
-
 
NC_004578  PSPTO_1061  methyl-accepting chemotaxis protein  33.38 
 
 
626 aa  289  1e-76  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.646209  n/a   
 
 
-
 
NC_009052  Sbal_1494  methyl-accepting chemotaxis sensory transducer  45.05 
 
 
548 aa  289  1e-76  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_3309  methyl-accepting chemotaxis sensory transducer  36.52 
 
 
625 aa  288  2e-76  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.776822 
 
 
-
 
NC_010501  PputW619_1011  methyl-accepting chemotaxis sensory transducer with Cache sensor  33.39 
 
 
624 aa  288  2.9999999999999996e-76  Pseudomonas putida W619  Bacteria  normal  0.752503  hitchhiker  0.0000000000251926 
 
 
-
 
NC_008463  PA14_55960  chemotactic transducer PctC  36.31 
 
 
632 aa  286  7e-76  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.289325  normal 
 
 
-
 
NC_002947  PP_1371  methyl-accepting chemotaxis transducer  39.48 
 
 
624 aa  286  8e-76  Pseudomonas putida KT2440  Bacteria  normal  normal  0.318672 
 
 
-
 
NC_007005  Psyr_2246  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  33.78 
 
 
629 aa  285  1.0000000000000001e-75  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.265681  normal  0.412954 
 
 
-
 
NC_007492  Pfl01_0354  chemotaxis sensory transducer, Cache sensor  35.92 
 
 
630 aa  286  1.0000000000000001e-75  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_4443  methyl-accepting chemotaxis sensory transducer with Cache sensor  39.26 
 
 
624 aa  286  1.0000000000000001e-75  Pseudomonas putida GB-1  Bacteria  normal  hitchhiker  0.0000033578 
 
 
-
 
NC_009656  PSPA7_4876  chemotactic transducer PctA  36.85 
 
 
629 aa  285  2.0000000000000002e-75  Pseudomonas aeruginosa PA7  Bacteria  normal  0.647167  n/a   
 
 
-
 
NC_009512  Pput_4352  methyl-accepting chemotaxis sensory transducer  39.26 
 
 
624 aa  284  4.0000000000000003e-75  Pseudomonas putida F1  Bacteria  normal  normal  0.0132701 
 
 
-
 
NC_007005  Psyr_0906  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  36.06 
 
 
626 aa  283  5.000000000000001e-75  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_1396  methyl-accepting chemotaxis sensory transducer  50.65 
 
 
548 aa  283  5.000000000000001e-75  Shewanella putrefaciens CN-32  Bacteria  normal  0.664947  n/a   
 
 
-
 
NC_007492  Pfl01_0124  chemotaxis sensory transducer, Cache sensor  33.64 
 
 
626 aa  283  8.000000000000001e-75  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.201174  normal 
 
 
-
 
NC_009656  PSPA7_4874  chemotactic transducer PctC  35.74 
 
 
632 aa  281  2e-74  Pseudomonas aeruginosa PA7  Bacteria  normal  0.153332  n/a   
 
 
-
 
NC_004578  PSPTO_2480  methyl-accepting chemotaxis protein  33.84 
 
 
629 aa  281  4e-74  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  44.9 
 
 
637 aa  278  2e-73  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_009784  VIBHAR_06314  histidine kinase  32.77 
 
 
623 aa  275  1.0000000000000001e-72  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009512  Pput_3489  methyl-accepting chemotaxis sensory transducer  35.91 
 
 
628 aa  275  2.0000000000000002e-72  Pseudomonas putida F1  Bacteria  normal  0.228387  normal 
 
 
-
 
NC_010322  PputGB1_1880  methyl-accepting chemotaxis sensory transducer with Cache sensor  35.85 
 
 
628 aa  274  3e-72  Pseudomonas putida GB-1  Bacteria  normal  0.454316  normal 
 
 
-
 
NC_002947  PP_2249  methyl-accepting chemotaxis transducer  35.71 
 
 
643 aa  272  1e-71  Pseudomonas putida KT2440  Bacteria  normal  0.477129  normal  0.786945 
 
 
-
 
NC_008700  Sama_0552  putative methyl-accepting chemotaxis sensory transducer  32.02 
 
 
648 aa  271  2.9999999999999997e-71  Shewanella amazonensis SB2B  Bacteria  normal  0.283806  decreased coverage  0.00439756 
 
 
-
 
NC_010501  PputW619_1723  methyl-accepting chemotaxis sensory transducer with Cache sensor  35.71 
 
 
626 aa  271  2.9999999999999997e-71  Pseudomonas putida W619  Bacteria  normal  0.372844  normal 
 
 
-
 
NC_009438  Sputcn32_0619  methyl-accepting chemotaxis sensory transducer  47.44 
 
 
634 aa  270  5e-71  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0130  methyl-accepting chemotaxis sensory transducer  34.94 
 
 
671 aa  268  2e-70  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  44.71 
 
 
638 aa  268  2e-70  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_013457  VEA_001368  methyl-accepting chemotaxis protein  46.95 
 
 
519 aa  267  2.9999999999999995e-70  Vibrio sp. Ex25  Bacteria  normal  0.237865  n/a   
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  48.04 
 
 
636 aa  266  1e-69  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_013457  VEA_001423  methyl-accepting chemotaxis protein  34.24 
 
 
623 aa  266  1e-69  Vibrio sp. Ex25  Bacteria  normal  0.896179  n/a   
 
 
-
 
NC_004347  SO_1056  methyl-accepting chemotaxis protein  33.21 
 
 
630 aa  265  2e-69  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_004578  PSPTO_2448  methyl-accepting chemotaxis protein  35.97 
 
 
646 aa  265  2e-69  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.718596  n/a   
 
 
-
 
NC_004578  PSPTO_3379  methyl-accepting chemotaxis protein  36.59 
 
 
559 aa  265  2e-69  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_0339  methyl-accepting chemotaxis sensory transducer  39.86 
 
 
558 aa  263  6e-69  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  47.6 
 
 
637 aa  263  6.999999999999999e-69  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_007005  Psyr_2220  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  35.55 
 
 
646 aa  262  1e-68  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.071358  normal  0.520396 
 
 
-
 
NC_011663  Sbal223_3405  methyl-accepting chemotaxis sensory transducer with Cache sensor  32.43 
 
 
630 aa  262  1e-68  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  34.88 
 
 
712 aa  262  1e-68  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_009997  Sbal195_3603  methyl-accepting chemotaxis sensory transducer  32.43 
 
 
630 aa  261  2e-68  Shewanella baltica OS195  Bacteria  normal  0.840663  normal 
 
 
-
 
NC_007492  Pfl01_0657  chemotaxis sensory transducer, Cache sensor  35.13 
 
 
648 aa  261  2e-68  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.511779  normal 
 
 
-
 
NC_009052  Sbal_0882  methyl-accepting chemotaxis sensory transducer  32.72 
 
 
630 aa  262  2e-68  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_3480  methyl-accepting chemotaxis sensory transducer  32.43 
 
 
630 aa  261  4e-68  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  36.23 
 
 
712 aa  261  4e-68  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_007492  Pfl01_4382  chemotaxis sensory transducer  35.61 
 
 
738 aa  260  6e-68  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.218372 
 
 
-
 
NC_011901  Tgr7_0851  methyl-accepting chemotaxis sensory transducer  42.46 
 
 
674 aa  258  2e-67  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.244273  n/a   
 
 
-
 
NC_010501  PputW619_4580  methyl-accepting chemotaxis sensory transducer  32.26 
 
 
648 aa  258  2e-67  Pseudomonas putida W619  Bacteria  normal  normal  0.0108713 
 
 
-
 
NC_008577  Shewana3_0895  methyl-accepting chemotaxis sensory transducer  33.52 
 
 
630 aa  258  2e-67  Shewanella sp. ANA-3  Bacteria  normal  normal  0.174985 
 
 
-
 
NC_003910  CPS_3864  methyl-accepting chemotaxis protein  42.86 
 
 
568 aa  257  4e-67  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_0584  methyl-accepting chemotaxis transducer  34.88 
 
 
647 aa  257  5e-67  Pseudomonas putida KT2440  Bacteria  normal  0.77697  normal  0.644217 
 
 
-
 
NC_007954  Sden_2239  chemotaxis sensory transducer  28.31 
 
 
648 aa  256  7e-67  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_4053  methyl-accepting chemotaxis protein  44.63 
 
 
634 aa  256  1.0000000000000001e-66  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009512  Pput_0623  methyl-accepting chemotaxis sensory transducer  34.67 
 
 
647 aa  255  1.0000000000000001e-66  Pseudomonas putida F1  Bacteria  normal  0.494937  normal 
 
 
-
 
NC_009457  VC0395_A0908  methyl-accepting chemotaxis protein  34.25 
 
 
633 aa  256  1.0000000000000001e-66  Vibrio cholerae O395  Bacteria  hitchhiker  0.00000172893  n/a   
 
 
-
 
NC_008322  Shewmr7_0930  methyl-accepting chemotaxis sensory transducer  33.52 
 
 
630 aa  255  2.0000000000000002e-66  Shewanella sp. MR-7  Bacteria  normal  normal  0.257402 
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  44.03 
 
 
541 aa  255  2.0000000000000002e-66  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_008789  Hhal_0443  methyl-accepting chemotaxis sensory transducer  43.97 
 
 
541 aa  254  4.0000000000000004e-66  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_013457  VEA_001073  N-acetylglucosamine regulated methyl-accepting chemotaxis protein  32.68 
 
 
628 aa  254  4.0000000000000004e-66  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_3042  methyl-accepting chemotaxis sensory transducer  33.33 
 
 
630 aa  254  4.0000000000000004e-66  Shewanella sp. MR-4  Bacteria  normal  normal  0.397129 
 
 
-
 
NC_009654  Mmwyl1_0969  methyl-accepting chemotaxis sensory transducer  32.46 
 
 
631 aa  254  4.0000000000000004e-66  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_0987  methyl-accepting chemotaxis protein  33.9 
 
 
554 aa  253  9.000000000000001e-66  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  32.38 
 
 
713 aa  253  9.000000000000001e-66  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_009052  Sbal_0870  methyl-accepting chemotaxis sensory transducer  33.52 
 
 
554 aa  253  9.000000000000001e-66  Shewanella baltica OS155  Bacteria  normal  0.0571565  n/a   
 
 
-
 
NC_008577  Shewana3_3611  methyl-accepting chemotaxis sensory transducer  44.19 
 
 
634 aa  253  1e-65  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_3494  methyl-accepting chemotaxis sensory transducer  33.9 
 
 
554 aa  253  1e-65  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_29760  putative chemotaxis transducer  36.87 
 
 
714 aa  251  3e-65  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
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