13 homologs were found in PanDaTox collection
for query gene SeD_A1790 on replicon NC_011205
Organism: Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011205  SeD_A1790  hypothetical protein  100 
 
 
62 aa  130  6e-30  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_011080  SNSL254_A1663  hypothetical protein  96.77 
 
 
170 aa  129  1.0000000000000001e-29  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011094  SeSA_A1659  hypothetical protein  93.55 
 
 
110 aa  125  2.0000000000000002e-28  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C1723  hypothetical protein  91.94 
 
 
110 aa  124  6e-28  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.034486  normal 
 
 
-
 
NC_011149  SeAg_B1616  hypothetical protein  91.94 
 
 
71 aa  122  2e-27  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.396977  n/a   
 
 
-
 
NC_010465  YPK_2434  hypothetical protein  58.06 
 
 
108 aa  71.2  0.000000000005  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_2336  hypothetical protein  56.45 
 
 
108 aa  68.2  0.00000000003  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.110773  n/a   
 
 
-
 
NC_011083  SeHA_C2233  hypothetical protein  53.23 
 
 
108 aa  66.2  0.0000000001  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.0210467  normal  0.784875 
 
 
-
 
NC_011094  SeSA_A2169  putative cytoplasmic protein  53.23 
 
 
108 aa  66.2  0.0000000001  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  unclonable  0.0000000813161  normal 
 
 
-
 
NC_011149  SeAg_B2114  putative cytoplasmic protein  53.23 
 
 
108 aa  66.2  0.0000000001  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  hitchhiker  0.00000000392621  n/a   
 
 
-
 
NC_011205  SeD_A2346  hypothetical protein  53.23 
 
 
108 aa  66.2  0.0000000001  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  hitchhiker  0.000082368  hitchhiker  0.00160333 
 
 
-
 
NC_010551  BamMC406_2748  hypothetical protein  49.21 
 
 
110 aa  63.9  0.0000000008  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_0940  protein of unknown function DUF1493  36.07 
 
 
109 aa  42.4  0.002  Pectobacterium wasabiae WPP163  Bacteria  normal  0.255022  n/a   
 
 
-
 
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