8 homologs were found in PanDaTox collection
for query gene SeD_A0048 on replicon NC_011205
Organism: Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011080  SNSL254_A0048  hypothetical protein  100 
 
 		 48 aa  97.1  8e-20  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  hitchhiker  0.000082289  normal  0.13686 
 
 
-
 
NC_011205  SeD_A0048  hypothetical protein  100 
 
 		 48 aa  97.1  8e-20  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  hitchhiker  0.000354577  hitchhiker  0.00861763 
 
 
-
 
NC_011149  SeAg_B0049  hypothetical protein  97.92 
 
 		 48 aa  95.1  3e-19  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  hitchhiker  0.000000000430124  n/a   
 
 
-
 
NC_009800  EcHS_A0026  hypothetical protein  67.39 
 
 		 72 aa  55.5  0.0000002  Escherichia coli HS  Bacteria  hitchhiker  0.00000000000000619518  n/a   
 
 
-
 
NC_009801  EcE24377A_0024  hypothetical protein  67.39 
 
 		 72 aa  55.5  0.0000002  Escherichia coli E24377A  Bacteria  decreased coverage  0.00000000000253239  n/a   
 
 
-
 
NC_010658  SbBS512_E0028  hypothetical protein  67.39 
 
 		 72 aa  55.5  0.0000002  Shigella boydii CDC 3083-94  Bacteria  hitchhiker  0.0000000000230015  n/a   
 
 
-
 
CP001509  ECD_00028  hypothetical protein  67.39 
 
 		 72 aa  55.5  0.0000003  Escherichia coli BL21(DE3)  Bacteria  unclonable  0.000000413778  n/a   
 
 
-
 
NC_012892  B21_00027  hypothetical protein  67.39 
 
 		 72 aa  55.5  0.0000003  Escherichia coli BL21  Bacteria  unclonable  0.000000259179  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>