6 homologs were found in PanDaTox collection
for query gene SeD_A0045 on replicon NC_011205
Organism: Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011080  SNSL254_A0046  xylose-proton symporter  99.76 
 
 
1416 bp  807    Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  hitchhiker  0.00152296  normal  0.141953 
 
 
-
 
NC_011083  SeHA_C0046  xylose-proton symporter  99.03 
 
 
1374 bp  783    Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  hitchhiker  0.00338984  normal 
 
 
-
 
NC_011094  SeSA_A0047  xylose-proton symporter  99.03 
 
 
1374 bp  783    Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  hitchhiker  0.0000774004  normal 
 
 
-
 
NC_011149  SeAg_B0047  xylose-proton symporter  99.27 
 
 
1416 bp  791    Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  hitchhiker  0.0000000245314  n/a   
 
 
-
 
NC_011205  SeD_A0045    100 
 
 
411 bp  815    Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  hitchhiker  0.00346773  hitchhiker  0.00643614 
 
 
-
 
NC_010498  EcSMS35_0020  xylose-proton symporter  84.25 
 
 
1374 bp  186  3e-45  Escherichia coli SMS-3-5  Bacteria  hitchhiker  0.0000106497  normal 
 
 
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