15 homologs were found in PanDaTox collection
for query gene Sden_3278 on replicon NC_007954
Organism: Shewanella denitrificans OS217



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007954  Sden_3278  hypothetical protein  100 
 
 
83 aa  176  9e-44  Shewanella denitrificans OS217  Bacteria  normal  0.0642581  n/a   
 
 
-
 
NC_009997  Sbal195_3505  hypothetical protein  64.94 
 
 
79 aa  113  8e-25  Shewanella baltica OS195  Bacteria  normal  0.0892856  hitchhiker  0.00094742 
 
 
-
 
NC_009997  Sbal195_2004  hypothetical protein  64.94 
 
 
79 aa  112  2e-24  Shewanella baltica OS195  Bacteria  hitchhiker  0.00029324  normal  0.699478 
 
 
-
 
NC_011663  Sbal223_0752  hypothetical protein  66.22 
 
 
76 aa  110  6e-24  Shewanella baltica OS223  Bacteria  normal  0.955623  hitchhiker  0.00552137 
 
 
-
 
NC_009997  Sbal195_1962  hypothetical protein  63.64 
 
 
79 aa  110  7e-24  Shewanella baltica OS195  Bacteria  normal  0.11332  normal  0.162361 
 
 
-
 
NC_009665  Shew185_1955  hypothetical protein  66.22 
 
 
76 aa  109  1e-23  Shewanella baltica OS185  Bacteria  hitchhiker  1.35841e-05  n/a   
 
 
-
 
NC_009665  Shew185_3380  hypothetical protein  66.22 
 
 
76 aa  108  2e-23  Shewanella baltica OS185  Bacteria  hitchhiker  3.67252e-07  n/a   
 
 
-
 
NC_009997  Sbal195_0759  hypothetical protein  66.22 
 
 
76 aa  107  4e-23  Shewanella baltica OS195  Bacteria  hitchhiker  0.00176998  unclonable  9.97439e-06 
 
 
-
 
NC_009665  Shew185_2574  hypothetical protein  66.22 
 
 
76 aa  107  4e-23  Shewanella baltica OS185  Bacteria  normal  0.0265244  n/a   
 
 
-
 
NC_009665  Shew185_0730  hypothetical protein  66.22 
 
 
76 aa  107  4e-23  Shewanella baltica OS185  Bacteria  decreased coverage  0.00157281  n/a   
 
 
-
 
NC_009052  Sbal_3626  hypothetical protein  66.22 
 
 
76 aa  107  4e-23  Shewanella baltica OS155  Bacteria  normal  0.225755  n/a   
 
 
-
 
NC_009665  Shew185_3269  hypothetical protein  64.86 
 
 
76 aa  107  5e-23  Shewanella baltica OS185  Bacteria  hitchhiker  0.00982213  n/a   
 
 
-
 
NC_009665  Shew185_1846  hypothetical protein  63.51 
 
 
76 aa  107  7e-23  Shewanella baltica OS185  Bacteria  hitchhiker  0.00598526  n/a   
 
 
-
 
NC_009997  Sbal195_3406  hypothetical protein  64.86 
 
 
76 aa  106  1e-22  Shewanella baltica OS195  Bacteria  normal  0.978757  hitchhiker  0.000727987 
 
 
-
 
NC_008345  Sfri_1641  hypothetical protein  65.71 
 
 
80 aa  103  6e-22  Shewanella frigidimarina NCIMB 400  Bacteria  hitchhiker  0.0076993  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>