More than 300 homologs were found in PanDaTox collection
for query gene Sdel_2060 on replicon NC_013512
Organism: Sulfurospirillum deleyianum DSM 6946



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013512  Sdel_2060  formate dehydrogenase family accessory protein FdhD  100 
 
 
262 aa  538  9.999999999999999e-153  Sulfurospirillum deleyianum DSM 6946  Bacteria  decreased coverage  0.0000863556  n/a   
 
 
-
 
NC_008787  CJJ81176_1500  formate dehydrogenase accessory protein  66.28 
 
 
260 aa  354  7.999999999999999e-97  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  0.919736  n/a   
 
 
-
 
NC_003912  CJE1681  formate dehydrogenase accessory protein  66.28 
 
 
260 aa  353  1e-96  Campylobacter jejuni RM1221  Bacteria  normal  n/a   
 
 
-
 
NC_009707  JJD26997_1860  formate dehydrogenase accessory protein  64.73 
 
 
260 aa  345  5e-94  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  n/a   
 
 
-
 
NC_009802  CCC13826_0211  formate dehydrogenase accessory protein  59.69 
 
 
260 aa  328  5.0000000000000004e-89  Campylobacter concisus 13826  Bacteria  normal  n/a   
 
 
-
 
NC_007575  Suden_0817  formate dehydrogenase accessory protein  37.75 
 
 
276 aa  182  5.0000000000000004e-45  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.0766349  n/a   
 
 
-
 
NC_011832  Mpal_1216  formate dehydrogenase family accessory protein FdhD  36.69 
 
 
261 aa  148  9e-35  Methanosphaerula palustris E1-9c  Archaea  normal  0.944709  normal  0.100536 
 
 
-
 
NC_007796  Mhun_2204  formate dehydrogenase family accessory protein FdhD  33.05 
 
 
254 aa  142  5e-33  Methanospirillum hungatei JF-1  Archaea  normal  0.154366  normal  0.450296 
 
 
-
 
NC_013525  Tter_0989  formate dehydrogenase family accessory protein FdhD  32.63 
 
 
266 aa  138  7.999999999999999e-32  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_007517  Gmet_2076  formate dehydrogenase, subunit FdhD  34.54 
 
 
263 aa  135  8e-31  Geobacter metallireducens GS-15  Bacteria  hitchhiker  9.82479e-16  normal 
 
 
-
 
NC_009253  Dred_2876  formate dehydrogenase family accessory protein FdhD  31.94 
 
 
262 aa  135  8e-31  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0487293  n/a   
 
 
-
 
NC_009712  Mboo_2122  formate dehydrogenase family accessory protein FdhD  33.05 
 
 
259 aa  133  3e-30  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.545765  normal 
 
 
-
 
NC_009440  Msed_1320  formate dehydrogenase family accessory protein FdhD  35.09 
 
 
254 aa  130  2.0000000000000002e-29  Metallosphaera sedula DSM 5348  Archaea  normal  normal 
 
 
-
 
NC_010717  PXO_00469  formate dehydrogenase accessory protein  29.96 
 
 
273 aa  129  6e-29  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0885199  n/a   
 
 
-
 
NC_013205  Aaci_1923  formate dehydrogenase family accessory protein FdhD  29.88 
 
 
280 aa  129  6e-29  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1033  formate dehydrogenase family accessory protein FdhD  31.89 
 
 
266 aa  129  7.000000000000001e-29  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.0364714  n/a   
 
 
-
 
NC_011146  Gbem_1437  formate dehydrogenase family accessory protein FdhD  30.71 
 
 
255 aa  127  1.0000000000000001e-28  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_4473  formate dehydrogenase family accessory protein FdhD  34.32 
 
 
276 aa  127  2.0000000000000002e-28  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.979472  n/a   
 
 
-
 
NC_013411  GYMC61_1343  formate dehydrogenase accessory protein  29.96 
 
 
263 aa  127  2.0000000000000002e-28  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009487  SaurJH9_2305  formate dehydrogenase accessory protein  30.2 
 
 
265 aa  127  3e-28  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_2347  formate dehydrogenase accessory protein  30.2 
 
 
265 aa  127  3e-28  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_3374  formate dehydrogenase family accessory protein FdhD  31.25 
 
 
260 aa  126  4.0000000000000003e-28  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_2817  formate dehydrogenase family accessory protein FdhD  31.95 
 
 
255 aa  126  5e-28  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009483  Gura_3385  formate dehydrogenase family accessory protein FdhD  31.03 
 
 
483 aa  125  5e-28  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_013204  Elen_2451  formate dehydrogenase family accessory protein FdhD  30.4 
 
 
281 aa  124  1e-27  Eggerthella lenta DSM 2243  Bacteria  normal  0.0979035  normal 
 
 
-
 
NC_012918  GM21_1958  formate dehydrogenase family accessory protein FdhD  31.58 
 
 
468 aa  124  1e-27  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_013510  Tcur_3534  formate dehydrogenase family accessory protein FdhD  29.85 
 
 
284 aa  124  2e-27  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_2264  formate dehydrogenase family accessory protein FdhD  31.58 
 
 
468 aa  124  2e-27  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_4033  formate dehydrogenase accessory protein  32.96 
 
 
287 aa  124  2e-27  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.681532  normal  0.294632 
 
 
-
 
NC_010718  Nther_2277  formate dehydrogenase family accessory protein FdhD  32 
 
 
258 aa  124  2e-27  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.181166  normal 
 
 
-
 
NC_007498  Pcar_1840  formate dehydrogenase accessory protein  31.43 
 
 
268 aa  123  3e-27  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00380429  n/a   
 
 
-
 
NC_007644  Moth_2175  formate dehydrogenase family accessory protein FdhD  28.74 
 
 
260 aa  123  4e-27  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal  0.145342 
 
 
-
 
NC_009668  Oant_3819  formate dehydrogenase accessory protein  30.83 
 
 
269 aa  122  4e-27  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.934196  n/a   
 
 
-
 
NC_007517  Gmet_1062  formate dehydrogenase, subunit FdhD  30 
 
 
479 aa  122  5e-27  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.0656292 
 
 
-
 
NC_009338  Mflv_2593  formate dehydrogenase accessory protein  32.58 
 
 
278 aa  122  5e-27  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_1157  formate dehydrogenase family accessory protein FdhD  35.27 
 
 
274 aa  122  7e-27  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_2346  formate dehydrogenase family accessory protein FdhD  34.06 
 
 
284 aa  122  8e-27  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.36394  n/a   
 
 
-
 
NC_014210  Ndas_4114  formate dehydrogenase family accessory protein FdhD  31.09 
 
 
293 aa  122  9e-27  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_008346  Swol_1030  formate dehydrogenase accessory protein  30.04 
 
 
263 aa  121  9e-27  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_3020  formate dehydrogenase family accessory protein FdhD  29.92 
 
 
278 aa  120  1.9999999999999998e-26  Variovorax paradoxus S110  Bacteria  normal  0.848082  n/a   
 
 
-
 
NC_009483  Gura_3370  formate dehydrogenase family accessory protein FdhD  29.01 
 
 
487 aa  119  6e-26  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
CP001800  Ssol_0639  formate dehydrogenase family accessory protein FdhD  33.79 
 
 
255 aa  118  7e-26  Sulfolobus solfataricus 98/2  Archaea  normal  0.444789  n/a   
 
 
-
 
NC_009921  Franean1_2306  formate dehydrogenase accessory protein  32.21 
 
 
286 aa  118  7.999999999999999e-26  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013169  Ksed_15020  formate dehydrogenase family accessory protein FdhD  32.01 
 
 
281 aa  118  9.999999999999999e-26  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.503102  normal 
 
 
-
 
NC_008010  Dgeo_2744  formate dehydrogenase family accessory protein FdhD  32.48 
 
 
251 aa  118  9.999999999999999e-26  Deinococcus geothermalis DSM 11300  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_12240  formate dehydrogenase family accessory protein FdhD  30.8 
 
 
272 aa  117  1.9999999999999998e-25  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_007796  Mhun_2019  formate dehydrogenase family accessory protein FdhD  31.66 
 
 
260 aa  116  3e-25  Methanospirillum hungatei JF-1  Archaea  normal  0.948078  normal 
 
 
-
 
NC_009051  Memar_1911  formate dehydrogenase family accessory protein FdhD  31.78 
 
 
249 aa  116  3.9999999999999997e-25  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_014151  Cfla_2115  formate dehydrogenase family accessory protein FdhD  31.23 
 
 
273 aa  116  3.9999999999999997e-25  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_3572  formate dehydrogenase accessory protein  31.82 
 
 
274 aa  115  5e-25  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_3577  formate dehydrogenase accessory protein  31.82 
 
 
274 aa  115  5e-25  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008705  Mkms_3645  formate dehydrogenase accessory protein  31.82 
 
 
274 aa  115  5e-25  Mycobacterium sp. KMS  Bacteria  normal  normal  0.259742 
 
 
-
 
NC_013947  Snas_0300  formate dehydrogenase family accessory protein FdhD  30.68 
 
 
268 aa  115  6e-25  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_3635  formate dehydrogenase accessory protein  28.75 
 
 
274 aa  115  7.999999999999999e-25  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.222739 
 
 
-
 
NC_002939  GSU0780  formate dehydrogenase accessory protein FdhD  28.4 
 
 
478 aa  114  2.0000000000000002e-24  Geobacter sulfurreducens PCA  Bacteria  normal  0.162723  n/a   
 
 
-
 
NC_013165  Shel_06930  formate dehydrogenase family accessory protein FdhD  29.03 
 
 
297 aa  114  2.0000000000000002e-24  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal  0.215671 
 
 
-
 
NC_003909  BCE_0654  formate dehydrogenase accessory protein  29.89 
 
 
268 aa  113  3e-24  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_008553  Mthe_0035  formate dehydrogenase family accessory protein FdhD  28.63 
 
 
238 aa  113  3e-24  Methanosaeta thermophila PT  Archaea  normal  n/a   
 
 
-
 
NC_009436  Ent638_4083  formate dehydrogenase accessory protein  30.4 
 
 
278 aa  112  4.0000000000000004e-24  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_2990  formate dehydrogenase family accessory protein FdhD  30.77 
 
 
255 aa  113  4.0000000000000004e-24  Geobacter sp. M21  Bacteria  n/a    hitchhiker  3.68227e-19 
 
 
-
 
NC_008554  Sfum_1205  formate dehydrogenase family accessory protein FdhD  26.25 
 
 
303 aa  112  4.0000000000000004e-24  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.495294 
 
 
-
 
NC_007519  Dde_3516  formate dehydrogenase family accessory protein FdhD  29.21 
 
 
294 aa  112  5e-24  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_3339  formate dehydrogenase family accessory protein FdhD  30.34 
 
 
297 aa  112  5e-24  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.224084 
 
 
-
 
NC_011206  Lferr_1352  formate dehydrogenase family accessory protein FdhD  29.27 
 
 
282 aa  112  7.000000000000001e-24  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_011883  Ddes_0829  formate dehydrogenase family accessory protein FdhD  27.34 
 
 
265 aa  112  7.000000000000001e-24  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.0159111  n/a   
 
 
-
 
NC_011761  AFE_1654  formate dehydrogenase family accessory protein FdhD  29.27 
 
 
282 aa  112  7.000000000000001e-24  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_4096  formate dehydrogenase family accessory protein FdhD  27.92 
 
 
274 aa  112  7.000000000000001e-24  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A0715  formate dehydrogenase accessory protein  29.25 
 
 
268 aa  111  1.0000000000000001e-23  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK3278  formate dehydrogenase accessory protein  28.93 
 
 
265 aa  111  1.0000000000000001e-23  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A0626  formate dehydrogenase accessory protein  29.5 
 
 
268 aa  111  1.0000000000000001e-23  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_4385  formate dehydrogenase family accessory protein FdhD  29.43 
 
 
288 aa  111  1.0000000000000001e-23  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_009674  Bcer98_0504  formate dehydrogenase accessory protein  30.45 
 
 
269 aa  111  1.0000000000000001e-23  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_0200  formate dehydrogenase family accessory protein FdhD  28.11 
 
 
272 aa  110  2.0000000000000002e-23  Thauera sp. MZ1T  Bacteria  normal  0.754057  n/a   
 
 
-
 
NC_013173  Dbac_1058  formate dehydrogenase family accessory protein FdhD  27.48 
 
 
264 aa  110  2.0000000000000002e-23  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_2130  formate dehydrogenase family accessory protein FdhD  32.81 
 
 
283 aa  110  2.0000000000000002e-23  Meiothermus silvanus DSM 9946  Bacteria  normal  0.455912  normal  0.581272 
 
 
-
 
NC_011772  BCG9842_B4711  formate dehydrogenase accessory protein  29.12 
 
 
268 aa  110  2.0000000000000002e-23  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_12913  formate dehydrogenase accessory protein  30.77 
 
 
276 aa  110  3e-23  Mycobacterium tuberculosis F11  Bacteria  normal  0.167876  normal 
 
 
-
 
NC_011773  BCAH820_3578  formate dehydrogenase accessory protein  28.93 
 
 
265 aa  110  3e-23  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_007347  Reut_A0620  formate dehydrogenase accessory protein  28.62 
 
 
288 aa  110  3e-23  Ralstonia eutropha JMP134  Bacteria  normal  0.979772  n/a   
 
 
-
 
NC_009523  RoseRS_4019  formate dehydrogenase family accessory protein FdhD  28.67 
 
 
288 aa  110  3e-23  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_011725  BCB4264_A3678  formate dehydrogenase accessory protein  28.22 
 
 
265 aa  109  4.0000000000000004e-23  Bacillus cereus B4264  Bacteria  normal  0.688402  n/a   
 
 
-
 
NC_003909  BCE_3585  formate dehydrogenase accessory protein  27.39 
 
 
265 aa  109  5e-23  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_4282  formate dehydrogenase accessory protein  27.44 
 
 
267 aa  109  5e-23  Escherichia coli SMS-3-5  Bacteria  normal  0.715148  normal 
 
 
-
 
NC_011658  BCAH187_A3595  formate dehydrogenase accessory protein  27.39 
 
 
265 aa  109  5e-23  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
CP001509  ECD_03780  formate dehydrogenase accessory protein  27.92 
 
 
277 aa  108  8.000000000000001e-23  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_4425  formate dehydrogenase accessory protein  27.92 
 
 
266 aa  108  8.000000000000001e-23  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_03729  hypothetical protein  27.92 
 
 
277 aa  108  8.000000000000001e-23  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_1293  formate dehydrogenase family accessory protein FdhD  30.24 
 
 
255 aa  108  8.000000000000001e-23  Geobacter bemidjiensis Bem  Bacteria  hitchhiker  0.0000222407  n/a   
 
 
-
 
NC_010658  SbBS512_E4374  formate dehydrogenase accessory protein  27.92 
 
 
266 aa  108  8.000000000000001e-23  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A4123  formate dehydrogenase accessory protein  27.92 
 
 
266 aa  108  8.000000000000001e-23  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_5346  formate dehydrogenase accessory protein  27.92 
 
 
277 aa  108  8.000000000000001e-23  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
CP001637  EcDH1_4089  formate dehydrogenase family accessory protein FdhD  27.92 
 
 
277 aa  108  9.000000000000001e-23  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_4122  formate dehydrogenase accessory protein  27.92 
 
 
277 aa  108  9.000000000000001e-23  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_005945  BAS3364  formate dehydrogenase accessory protein  28.93 
 
 
265 aa  108  1e-22  Bacillus anthracis str. Sterne  Bacteria  normal  0.144836  n/a   
 
 
-
 
NC_005957  BT9727_3328  formate dehydrogenase accessory protein  28.93 
 
 
265 aa  108  1e-22  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0183588  n/a   
 
 
-
 
NC_007530  GBAA_3628  formate dehydrogenase accessory protein  28.93 
 
 
265 aa  108  1e-22  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_0082  formate dehydrogenase accessory protein  29.92 
 
 
278 aa  107  1e-22  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_010465  YPK_0036  formate dehydrogenase accessory protein  29.8 
 
 
274 aa  108  1e-22  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_0466  formate dehydrogenase accessory protein  28.35 
 
 
262 aa  107  1e-22  Geobacillus sp. WCH70  Bacteria  normal  0.276769  n/a   
 
 
-
 
NC_007973  Rmet_0556  formate dehydrogenase accessory protein  29.63 
 
 
281 aa  108  1e-22  Cupriavidus metallidurans CH34  Bacteria  normal  0.152789  normal  0.415785 
 
 
-
 
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