More than 300 homologs were found in PanDaTox collection
for query gene Sdel_0113 on replicon NC_013512
Organism: Sulfurospirillum deleyianum DSM 6946



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013512  Sdel_0113  chemotaxis sensory transducer  100 
 
 
563 aa  1131    Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_0112  chemotaxis sensory transducer  80.99 
 
 
563 aa  886    Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_0631  chemotaxis sensory transducer  61.73 
 
 
656 aa  460  9.999999999999999e-129  Sulfurospirillum deleyianum DSM 6946  Bacteria  hitchhiker  0.00821954  n/a   
 
 
-
 
NC_009715  CCV52592_1331  methyl-accepting chemotaxis sensory transducer  48.32 
 
 
563 aa  451  1e-125  Campylobacter curvus 525.92  Bacteria  normal  0.158014  n/a   
 
 
-
 
NC_009802  CCC13826_0840  cache domain-contain protein  46.74 
 
 
566 aa  431  1e-119  Campylobacter concisus 13826  Bacteria  normal  0.287851  n/a   
 
 
-
 
NC_013512  Sdel_2141  chemotaxis sensory transducer  48.55 
 
 
708 aa  419  1e-116  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_009802  CCC13826_1039  protease htpx  50.51 
 
 
656 aa  363  5.0000000000000005e-99  Campylobacter concisus 13826  Bacteria  normal  0.0758551  n/a   
 
 
-
 
NC_013512  Sdel_1205  chemotaxis sensory transducer  52.72 
 
 
713 aa  359  7e-98  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_1826  chemotaxis sensory transducer  52.56 
 
 
650 aa  347  3e-94  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_007575  Suden_0988  methyl-accepting chemotaxis sensory transducer  48.87 
 
 
652 aa  310  2.9999999999999997e-83  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_007575  Suden_1932  methyl-accepting chemotaxis sensory transducer  53.31 
 
 
682 aa  311  2.9999999999999997e-83  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_0819  chemotaxis sensory transducer  38.17 
 
 
627 aa  280  5e-74  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  0.113637  n/a   
 
 
-
 
NC_013512  Sdel_1930  chemotaxis sensory transducer  39.58 
 
 
625 aa  277  5e-73  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_1073  chemotaxis sensory transducer  45.61 
 
 
633 aa  275  1.0000000000000001e-72  Sulfurospirillum deleyianum DSM 6946  Bacteria  hitchhiker  0.00919731  n/a   
 
 
-
 
NC_013512  Sdel_1432  chemotaxis sensory transducer  51.49 
 
 
546 aa  275  2.0000000000000002e-72  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  0.138665  n/a   
 
 
-
 
NC_008740  Maqu_2346  methyl-accepting chemotaxis sensory transducer  31.35 
 
 
564 aa  268  2e-70  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_1931  chemotaxis sensory transducer  38.8 
 
 
621 aa  268  2e-70  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A2596  methyl-accepting chemotaxis protein  33 
 
 
564 aa  246  8e-64  Vibrio cholerae O395  Bacteria  unclonable  0.00000000000057467  n/a   
 
 
-
 
NC_009831  Ssed_3759  methyl-accepting chemotaxis sensory transducer  32.83 
 
 
554 aa  229  1e-58  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0990388  normal 
 
 
-
 
NC_013512  Sdel_1854  chemotaxis sensory transducer  44.19 
 
 
536 aa  229  1e-58  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_2119  methyl-accepting chemotaxis sensory transducer  31.87 
 
 
548 aa  228  3e-58  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009715  CCV52592_2035  putative transducer  36.69 
 
 
626 aa  226  8e-58  Campylobacter curvus 525.92  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_3709  methyl-accepting chemotaxis sensory transducer with Cache sensor  30.58 
 
 
546 aa  225  2e-57  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_3600  methyl-accepting chemotaxis sensory transducer  30.68 
 
 
546 aa  224  2e-57  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_0837  methyl-accepting chemotaxis sensory transducer  34.99 
 
 
554 aa  223  4.9999999999999996e-57  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_2880  putative methyl-accepting chemotaxis sensory transducer  31.25 
 
 
558 aa  223  9.999999999999999e-57  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_007575  Suden_1178  methyl-accepting chemotaxis sensory transducer  37.82 
 
 
530 aa  221  3e-56  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_001822  methyl-accepting chemotaxis protein  33.63 
 
 
557 aa  221  3e-56  Vibrio sp. Ex25  Bacteria  unclonable  0.00000124429  n/a   
 
 
-
 
NC_007492  Pfl01_2601  chemotaxis sensory transducer  30.52 
 
 
569 aa  218  2e-55  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.441915  normal  0.36116 
 
 
-
 
NC_013512  Sdel_1860  chemotaxis sensory transducer  43.08 
 
 
533 aa  214  2.9999999999999995e-54  Sulfurospirillum deleyianum DSM 6946  Bacteria  hitchhiker  0.00521087  n/a   
 
 
-
 
NC_009092  Shew_0808  methyl-accepting chemotaxis sensory transducer  31.49 
 
 
554 aa  213  7.999999999999999e-54  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_1776  histidine kinase, HAMP region: chemotaxis sensory transducer  29.41 
 
 
543 aa  212  1e-53  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.363817 
 
 
-
 
NC_002939  GSU1030  methyl-accepting chemotaxis protein  31.73 
 
 
549 aa  211  2e-53  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_3045  methyl-accepting chemotaxis sensory transducer  30.48 
 
 
563 aa  210  5e-53  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.0000317109  n/a   
 
 
-
 
NC_009997  Sbal195_3617  methyl-accepting chemotaxis sensory transducer  34.4 
 
 
554 aa  210  6e-53  Shewanella baltica OS195  Bacteria  normal  normal  0.964358 
 
 
-
 
NC_009438  Sputcn32_3200  methyl-accepting chemotaxis sensory transducer  35.21 
 
 
554 aa  209  9e-53  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_1983  methyl-accepting chemotaxis sensory transducer  30.43 
 
 
548 aa  209  1e-52  Shewanella sediminis HAW-EB3  Bacteria  decreased coverage  0.000213036  normal  0.437149 
 
 
-
 
NC_011663  Sbal223_3422  methyl-accepting chemotaxis sensory transducer with Cache sensor  34.17 
 
 
554 aa  208  2e-52  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_0870  methyl-accepting chemotaxis sensory transducer  34.17 
 
 
554 aa  209  2e-52  Shewanella baltica OS155  Bacteria  normal  0.0571565  n/a   
 
 
-
 
NC_009512  Pput_2828  methyl-accepting chemotaxis sensory transducer  31.42 
 
 
544 aa  207  3e-52  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_2757  methyl-accepting chemotaxis sensory transducer  30.36 
 
 
544 aa  208  3e-52  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_3494  methyl-accepting chemotaxis sensory transducer  34.17 
 
 
554 aa  207  3e-52  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_2861  methyl-accepting chemotaxis sensory transducer  31.18 
 
 
544 aa  207  4e-52  Pseudomonas putida KT2440  Bacteria  normal  normal  0.445183 
 
 
-
 
NC_002939  GSU0400  methyl-accepting chemotaxis protein  30.37 
 
 
549 aa  206  8e-52  Geobacter sulfurreducens PCA  Bacteria  normal  0.431065  n/a   
 
 
-
 
NC_010322  PputGB1_2920  methyl-accepting chemotaxis sensory transducer  31.73 
 
 
544 aa  206  1e-51  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_2174  methyl-accepting chemotaxis sensory transducer  33.08 
 
 
544 aa  205  2e-51  Pseudomonas mendocina ymp  Bacteria  normal  decreased coverage  0.00506259 
 
 
-
 
NC_008609  Ppro_0042  methyl-accepting chemotaxis sensory transducer  29.91 
 
 
565 aa  205  2e-51  Pelobacter propionicus DSM 2379  Bacteria  normal  0.121118  n/a   
 
 
-
 
NC_009483  Gura_3394  methyl-accepting chemotaxis sensory transducer  31.65 
 
 
664 aa  204  3e-51  Geobacter uraniireducens Rf4  Bacteria  decreased coverage  0.00000171268  n/a   
 
 
-
 
NC_011830  Dhaf_0079  methyl-accepting chemotaxis sensory transducer with Cache sensor  27.33 
 
 
588 aa  204  5e-51  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.031352  n/a   
 
 
-
 
NC_004347  SO_0987  methyl-accepting chemotaxis protein  34.16 
 
 
554 aa  202  9.999999999999999e-51  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_013512  Sdel_0262  chemotaxis sensory transducer  34.29 
 
 
650 aa  202  1.9999999999999998e-50  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_3299  methyl-accepting chemotaxis sensory transducer  34.23 
 
 
554 aa  201  3.9999999999999996e-50  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_0824  methyl-accepting chemotaxis sensory transducer  34.09 
 
 
554 aa  200  6e-50  Shewanella sp. MR-4  Bacteria  normal  hitchhiker  0.00067966 
 
 
-
 
NC_008322  Shewmr7_3199  methyl-accepting chemotaxis sensory transducer  34.23 
 
 
554 aa  199  1.0000000000000001e-49  Shewanella sp. MR-7  Bacteria  normal  normal  0.927661 
 
 
-
 
NC_009831  Ssed_3532  methyl-accepting chemotaxis sensory transducer  33.71 
 
 
555 aa  198  2.0000000000000003e-49  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_0641  methyl-accepting chemotaxis sensory transducer  35.69 
 
 
568 aa  198  2.0000000000000003e-49  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_07022  histidine kinase  31.03 
 
 
553 aa  199  2.0000000000000003e-49  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009616  Tmel_1579  methyl-accepting chemotaxis sensory transducer  32.55 
 
 
565 aa  197  3e-49  Thermosipho melanesiensis BI429  Bacteria  normal  0.327894  n/a   
 
 
-
 
NC_004578  PSPTO_3379  methyl-accepting chemotaxis protein  27.35 
 
 
559 aa  198  3e-49  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_3246  methyl-accepting chemotaxis sensory transducer  30.58 
 
 
601 aa  198  3e-49  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.416407  n/a   
 
 
-
 
NC_009665  Shew185_3666  methyl-accepting chemotaxis sensory transducer  35.54 
 
 
554 aa  197  3e-49  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_3699  methyl-accepting chemotaxis protein  30.15 
 
 
543 aa  197  4.0000000000000005e-49  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_0581  methyl-accepting chemotaxis sensory transducer  31.44 
 
 
554 aa  197  5.000000000000001e-49  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3789  methyl-accepting chemotaxis sensory transducer  34.76 
 
 
554 aa  196  7e-49  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009456  VC0395_0122  methyl-accepting chemotaxis protein  31.48 
 
 
553 aa  196  9e-49  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3601  methyl-accepting chemotaxis sensory transducer with Cache sensor  35.97 
 
 
554 aa  196  1e-48  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_007912  Sde_2316  putative methyl-accepting chemotaxis sensory transducer  29.14 
 
 
548 aa  196  1e-48  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0208981 
 
 
-
 
NC_013457  VEA_000971  methyl-accepting chemotaxis protein  31.2 
 
 
553 aa  195  1e-48  Vibrio sp. Ex25  Bacteria  normal  0.370017  n/a   
 
 
-
 
NC_011883  Ddes_0166  methyl-accepting chemotaxis sensory transducer with Cache sensor  34.27 
 
 
601 aa  195  2e-48  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_2212  methyl-accepting chemotaxis sensory transducer  32.97 
 
 
549 aa  194  3e-48  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_1365  methyl-accepting chemotaxis sensory transducer  28.49 
 
 
566 aa  194  4e-48  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_0630  methyl-accepting chemotaxis sensory transducer  32.46 
 
 
554 aa  194  4e-48  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_3052  methyl-accepting chemotaxis sensory transducer  34.39 
 
 
554 aa  193  7e-48  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_05646  histidine kinase  32.31 
 
 
482 aa  193  9e-48  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013173  Dbac_1510  methyl-accepting chemotaxis sensory transducer with Cache sensor  31.78 
 
 
574 aa  192  1e-47  Desulfomicrobium baculatum DSM 4028  Bacteria  decreased coverage  0.00534894  n/a   
 
 
-
 
NC_010506  Swoo_2617  methyl-accepting chemotaxis sensory transducer  31.14 
 
 
548 aa  192  1e-47  Shewanella woodyi ATCC 51908  Bacteria  normal  0.224982  normal  0.210295 
 
 
-
 
NC_008321  Shewmr4_3323  methyl-accepting chemotaxis sensory transducer  31.83 
 
 
554 aa  192  2e-47  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_3112  chemotaxis sensory transducer  32.46 
 
 
541 aa  191  2.9999999999999997e-47  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_010483  TRQ2_1321  methyl-accepting chemotaxis sensory transducer  29.6 
 
 
566 aa  191  2.9999999999999997e-47  Thermotoga sp. RQ2  Bacteria  decreased coverage  0.00082247  n/a   
 
 
-
 
NC_008577  Shewana3_3491  methyl-accepting chemotaxis sensory transducer  31.83 
 
 
554 aa  191  2.9999999999999997e-47  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_1267  methyl-accepting chemotaxis protein  28.57 
 
 
557 aa  190  5e-47  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_0520  methyl-accepting chemotaxis sensory transducer  31.07 
 
 
561 aa  190  5e-47  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.859036  n/a   
 
 
-
 
NC_009457  VC0395_A2659  methyl-accepting chemotaxis protein  32.24 
 
 
556 aa  189  1e-46  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_0078  methyl-accepting chemotaxis sensory transducer with Cache sensor  28.55 
 
 
588 aa  188  2e-46  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.857462  n/a   
 
 
-
 
NC_007348  Reut_B4001  histidine kinase, HAMP region: chemotaxis sensory transducer  28.7 
 
 
585 aa  187  3e-46  Ralstonia eutropha JMP134  Bacteria  normal  0.0946714  n/a   
 
 
-
 
NC_007963  Csal_1423  methyl-accepting chemotaxis sensory transducer  26.61 
 
 
584 aa  187  4e-46  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_2327  putative methyl-accepting chemotaxis sensory transducer  29.04 
 
 
554 aa  187  4e-46  Shewanella amazonensis SB2B  Bacteria  normal  0.644098  normal  0.637343 
 
 
-
 
NC_008751  Dvul_0339  methyl-accepting chemotaxis sensory transducer  29.92 
 
 
603 aa  186  8e-46  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.774772 
 
 
-
 
NC_003910  CPS_4964  methyl-accepting chemotaxis protein  28.83 
 
 
545 aa  186  1.0000000000000001e-45  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_1511  methyl-accepting chemotaxis sensory transducer with Cache sensor  31.17 
 
 
574 aa  186  1.0000000000000001e-45  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0260271  n/a   
 
 
-
 
NC_011769  DvMF_1869  methyl-accepting chemotaxis sensory transducer with Cache sensor  31.29 
 
 
607 aa  186  1.0000000000000001e-45  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_011313  VSAL_II0756  methyl-accepting chemotaxis protein  30.77 
 
 
558 aa  185  2.0000000000000003e-45  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_011883  Ddes_0086  methyl-accepting chemotaxis sensory transducer with Cache sensor  30.57 
 
 
599 aa  184  3e-45  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_0461  methyl-accepting chemotaxis sensory transducer  31.43 
 
 
569 aa  184  5.0000000000000004e-45  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_3858  methyl-accepting chemotaxis sensory transducer with Cache sensor  26.58 
 
 
526 aa  184  5.0000000000000004e-45  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_2548  putative chemotaxis transducer  27.24 
 
 
561 aa  182  1e-44  Pseudomonas aeruginosa PA7  Bacteria  normal  0.271227  n/a   
 
 
-
 
NC_011145  AnaeK_3775  methyl-accepting chemotaxis sensory transducer  26.78 
 
 
526 aa  181  2e-44  Anaeromyxobacter sp. K  Bacteria  normal  0.268134  n/a   
 
 
-
 
NC_007925  RPC_3380  methyl-accepting chemotaxis sensory transducer  29.08 
 
 
567 aa  180  4.999999999999999e-44  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.689596 
 
 
-
 
NC_009715  CCV52592_0638  hydrogenase nickel incorporation protein HypB  37.41 
 
 
266 aa  179  1e-43  Campylobacter curvus 525.92  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_29800  putative chemotaxis transducer  27.89 
 
 
561 aa  179  1e-43  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  decreased coverage  0.00431462  normal 
 
 
-
 
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