More than 300 homologs were found in PanDaTox collection
for query gene Sde_3212 on replicon NC_007912
Organism: Saccharophagus degradans 2-40



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007912  Sde_3212  response regulator receiver protein  100 
 
 
150 aa  309  7.999999999999999e-84  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_0554  response regulator receiver protein  47.41 
 
 
156 aa  126  8.000000000000001e-29  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_009712  Mboo_1811  response regulator receiver protein  43.17 
 
 
153 aa  124  5e-28  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal  0.121023 
 
 
-
 
NC_008346  Swol_2131  response regulator receiver protein  42.54 
 
 
148 aa  119  1.9999999999999998e-26  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.159262  n/a   
 
 
-
 
NC_007484  Noc_2451  response regulator receiver  41.55 
 
 
148 aa  118  3e-26  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.694561  n/a   
 
 
-
 
NC_013501  Rmar_2409  response regulator receiver protein  41.55 
 
 
151 aa  117  4.9999999999999996e-26  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_2664  response regulator receiver protein  42.96 
 
 
147 aa  117  4.9999999999999996e-26  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.213222  normal 
 
 
-
 
NC_011146  Gbem_1954  response regulator receiver protein  39.72 
 
 
146 aa  117  7e-26  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2262  response regulator receiver protein  40.43 
 
 
146 aa  116  9e-26  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009523  RoseRS_3060  response regulator receiver protein  41.04 
 
 
147 aa  114  3e-25  Roseiflexus sp. RS-1  Bacteria  normal  0.527476  hitchhiker  0.00457067 
 
 
-
 
NC_008009  Acid345_1813  response regulator receiver protein  36.49 
 
 
156 aa  114  3.9999999999999997e-25  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_1826  response regulator receiver domain-containing protein  41.73 
 
 
148 aa  113  1.0000000000000001e-24  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_04305  two-component system regulatory protein  37.68 
 
 
146 aa  112  1.0000000000000001e-24  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_0092  response regulator receiver protein  38.78 
 
 
152 aa  112  1.0000000000000001e-24  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_4153  response regulator receiver protein  39.46 
 
 
152 aa  113  1.0000000000000001e-24  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0290  response regulator receiver protein  39.86 
 
 
151 aa  112  1.0000000000000001e-24  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.00000140993  n/a   
 
 
-
 
NC_011071  Smal_3434  response regulator receiver protein  37.68 
 
 
146 aa  112  2.0000000000000002e-24  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.0662678 
 
 
-
 
NC_011146  Gbem_0974  response regulator receiver protein  38.69 
 
 
162 aa  111  3e-24  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_0934  response regulator receiver protein  37.86 
 
 
160 aa  110  5e-24  Opitutus terrae PB90-1  Bacteria  normal  0.152024  normal 
 
 
-
 
NC_007604  Synpcc7942_1356  response regulator receiver domain-containing protein  41.78 
 
 
151 aa  110  5e-24  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_4420  response regulator receiver protein  42.75 
 
 
149 aa  110  6e-24  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.390394 
 
 
-
 
NC_012918  GM21_3286  response regulator receiver protein  37.96 
 
 
162 aa  110  6e-24  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011884  Cyan7425_0789  response regulator receiver protein  42.66 
 
 
148 aa  109  1.0000000000000001e-23  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_011138  MADE_01274  putative two-component response regulator  38.62 
 
 
150 aa  108  2.0000000000000002e-23  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_007796  Mhun_2877  response regulator receiver domain-containing protein  38.81 
 
 
154 aa  108  4.0000000000000004e-23  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_008609  Ppro_2726  response regulator receiver protein  38.3 
 
 
145 aa  107  6e-23  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_3011  response regulator receiver protein  38.85 
 
 
145 aa  107  6e-23  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0415054  n/a   
 
 
-
 
NC_007355  Mbar_A3248  response regulator receiver  35.21 
 
 
148 aa  106  9.000000000000001e-23  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.264895  normal  0.0679711 
 
 
-
 
NC_011901  Tgr7_1115  response regulator receiver protein  42.25 
 
 
149 aa  106  1e-22  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_0315  response regulator receiver protein  40.15 
 
 
141 aa  105  2e-22  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_7209  response regulator receiver protein  37.41 
 
 
149 aa  105  3e-22  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.768943  normal 
 
 
-
 
NC_011369  Rleg2_0284  response regulator receiver protein  40.15 
 
 
141 aa  105  3e-22  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_3781  response regulator receiver domain-containing protein  37.14 
 
 
154 aa  104  3e-22  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.699777 
 
 
-
 
NC_007958  RPD_2404  response regulator receiver  39.58 
 
 
154 aa  104  3e-22  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0437246 
 
 
-
 
NC_010682  Rpic_3142  response regulator receiver protein  35.21 
 
 
164 aa  104  4e-22  Ralstonia pickettii 12J  Bacteria  normal  0.460947  normal  0.158986 
 
 
-
 
NC_007333  Tfu_2342  response regulator receiver  34.27 
 
 
143 aa  103  7e-22  Thermobifida fusca YX  Bacteria  hitchhiker  0.00382381  n/a   
 
 
-
 
NC_013440  Hoch_4644  response regulator receiver protein  38.13 
 
 
145 aa  103  7e-22  Haliangium ochraceum DSM 14365  Bacteria  normal  0.0382992  normal 
 
 
-
 
NC_007948  Bpro_4198  response regulator receiver domain-containing protein  41.67 
 
 
146 aa  103  7e-22  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_4452  response regulator receiver domain-containing protein  38.03 
 
 
155 aa  102  1e-21  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_008553  Mthe_1248  response regulator receiver protein  37.32 
 
 
157 aa  102  1e-21  Methanosaeta thermophila PT  Archaea  normal  0.234845  n/a   
 
 
-
 
NC_012856  Rpic12D_2794  response regulator receiver protein  35.21 
 
 
155 aa  102  1e-21  Ralstonia pickettii 12D  Bacteria  normal  normal  0.531019 
 
 
-
 
NC_011004  Rpal_3426  response regulator receiver protein  38.03 
 
 
154 aa  102  2e-21  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0768314  n/a   
 
 
-
 
NC_013158  Huta_1869  response regulator receiver protein  35.46 
 
 
146 aa  100  7e-21  Halorhabdus utahensis DSM 12940  Archaea  normal  0.124922  n/a   
 
 
-
 
NC_007912  Sde_0263  response regulator receiver domain-containing protein  38.73 
 
 
152 aa  100  8e-21  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.132061 
 
 
-
 
NC_010725  Mpop_0540  response regulator receiver protein  33.79 
 
 
153 aa  100  8e-21  Methylobacterium populi BJ001  Bacteria  normal  0.526175  normal 
 
 
-
 
NC_013595  Sros_8462  response regulator receiver protein  35.37 
 
 
149 aa  99.4  1e-20  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_5359  response regulator receiver protein  34.48 
 
 
148 aa  99.8  1e-20  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_007484  Noc_1757  response regulator receiver  39.86 
 
 
149 aa  99.8  1e-20  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.282821  n/a   
 
 
-
 
NC_013730  Slin_0753  response regulator receiver protein  35.97 
 
 
146 aa  100  1e-20  Spirosoma linguale DSM 74  Bacteria  normal  0.621173  normal 
 
 
-
 
NC_010814  Glov_0807  response regulator receiver protein  34.56 
 
 
158 aa  99.8  1e-20  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_0424  response regulator receiver protein  39.42 
 
 
150 aa  99.4  1e-20  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008347  Mmar10_0782  response regulator receiver protein  35.42 
 
 
160 aa  99.8  1e-20  Maricaulis maris MCS10  Bacteria  hitchhiker  0.00636968  normal  0.0949177 
 
 
-
 
NC_014210  Ndas_0444  response regulator receiver protein  33.33 
 
 
144 aa  99.8  1e-20  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.247834 
 
 
-
 
NC_013440  Hoch_4791  response regulator receiver protein  34.93 
 
 
147 aa  99.4  2e-20  Haliangium ochraceum DSM 14365  Bacteria  normal  0.612255  normal 
 
 
-
 
NC_013922  Nmag_2693  response regulator receiver protein  35.04 
 
 
154 aa  98.6  2e-20  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_008781  Pnap_0449  response regulator receiver protein  37.88 
 
 
146 aa  98.6  2e-20  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_1192  response regulator receiver domain-containing protein  37.5 
 
 
147 aa  99  2e-20  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.0582118  normal 
 
 
-
 
NC_013510  Tcur_1124  response regulator receiver protein  35.25 
 
 
165 aa  98.6  2e-20  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_007614  Nmul_A2298  response regulator receiver domain-containing protein  40.15 
 
 
146 aa  99  2e-20  Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.12586  n/a   
 
 
-
 
NC_007777  Francci3_2153  response regulator receiver protein  38.69 
 
 
167 aa  99  2e-20  Frankia sp. CcI3  Bacteria  normal  0.0689732  normal  0.426146 
 
 
-
 
NC_013093  Amir_5035  response regulator receiver protein  34.53 
 
 
145 aa  99  2e-20  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_2540  response regulator receiver protein  34.46 
 
 
150 aa  99.4  2e-20  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_010505  Mrad2831_4269  response regulator receiver protein  33.79 
 
 
153 aa  98.6  3e-20  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.306283 
 
 
-
 
NC_007413  Ava_4344  response regulator receiver domain-containing protein  34.51 
 
 
146 aa  98.2  3e-20  Anabaena variabilis ATCC 29413  Bacteria  normal  0.676678  normal 
 
 
-
 
NC_011884  Cyan7425_3016  response regulator receiver protein  37.06 
 
 
148 aa  98.6  3e-20  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_2355  response regulator receiver protein  33.57 
 
 
153 aa  97.8  4e-20  Pseudomonas putida KT2440  Bacteria  normal  normal  0.484722 
 
 
-
 
NC_013730  Slin_2718  response regulator receiver protein  35.07 
 
 
153 aa  98.2  4e-20  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.50209 
 
 
-
 
NC_007517  Gmet_3218  response regulator receiver domain-containing protein  39.39 
 
 
150 aa  97.8  4e-20  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.00000000302211  hitchhiker  0.000261654 
 
 
-
 
NC_013743  Htur_0708  response regulator receiver protein  34.29 
 
 
154 aa  98.2  4e-20  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_009512  Pput_3340  response regulator receiver protein  33.57 
 
 
153 aa  97.8  4e-20  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_1795  response regulator receiver protein  33.57 
 
 
153 aa  98.2  4e-20  Pseudomonas putida W619  Bacteria  normal  normal  0.225692 
 
 
-
 
NC_011726  PCC8801_4351  response regulator receiver protein  38.13 
 
 
152 aa  97.4  5e-20  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_4413  response regulator receiver protein  38.13 
 
 
152 aa  97.4  5e-20  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.0271352 
 
 
-
 
NC_010322  PputGB1_1955  response regulator receiver protein  33.57 
 
 
153 aa  97.4  6e-20  Pseudomonas putida GB-1  Bacteria  normal  0.205931  normal  0.0730175 
 
 
-
 
NC_009338  Mflv_3270  response regulator receiver protein  34.72 
 
 
146 aa  97.4  6e-20  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A0665  response regulator receiver domain-containing protein  33.58 
 
 
148 aa  97.1  7e-20  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A1654  response regulator receiver domain-containing protein  35.25 
 
 
139 aa  96.7  9e-20  Rhodospirillum rubrum ATCC 11170  Bacteria  hitchhiker  0.00207304  n/a   
 
 
-
 
NC_008010  Dgeo_2528  response regulator receiver protein  36.55 
 
 
145 aa  96.7  9e-20  Deinococcus geothermalis DSM 11300  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU3261  response regulator  38.69 
 
 
150 aa  96.7  1e-19  Geobacter sulfurreducens PCA  Bacteria  normal  0.360418  n/a   
 
 
-
 
NC_010681  Bphyt_1283  response regulator receiver protein  33.8 
 
 
153 aa  96.3  1e-19  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.0282174 
 
 
-
 
NC_014148  Plim_0458  response regulator receiver  34.72 
 
 
151 aa  96.3  1e-19  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_007484  Noc_1704  response regulator receiver  36.69 
 
 
139 aa  96.3  1e-19  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.635187  n/a   
 
 
-
 
NC_008146  Mmcs_2690  response regulator receiver protein  33.56 
 
 
147 aa  96.3  1e-19  Mycobacterium sp. MCS  Bacteria  normal  0.0483585  n/a   
 
 
-
 
NC_010622  Bphy_0991  response regulator receiver protein  32.86 
 
 
162 aa  96.3  1e-19  Burkholderia phymatum STM815  Bacteria  normal  0.221744  normal 
 
 
-
 
NC_009077  Mjls_2720  response regulator receiver protein  33.56 
 
 
147 aa  96.3  1e-19  Mycobacterium sp. JLS  Bacteria  normal  0.227152  normal  0.416438 
 
 
-
 
NC_009921  Franean1_6521  response regulator receiver protein  34.96 
 
 
146 aa  96.3  1e-19  Frankia sp. EAN1pec  Bacteria  normal  0.66047  normal  0.0570772 
 
 
-
 
NC_008705  Mkms_2734  response regulator receiver protein  33.56 
 
 
147 aa  96.3  1e-19  Mycobacterium sp. KMS  Bacteria  normal  0.192545  normal  0.228442 
 
 
-
 
NC_011729  PCC7424_5135  response regulator receiver protein  38.85 
 
 
146 aa  95.9  2e-19  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  0.00000000600577 
 
 
-
 
NC_008609  Ppro_0092  response regulator receiver protein  34.87 
 
 
156 aa  95.5  2e-19  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_0679  response regulator receiver protein  34.72 
 
 
144 aa  95.1  3e-19  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.145382  normal  0.0176538 
 
 
-
 
NC_013521  Sked_22950  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  32.62 
 
 
146 aa  94  6e-19  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.213656 
 
 
-
 
NC_010511  M446_2205  response regulator receiver protein  32.41 
 
 
153 aa  93.6  7e-19  Methylobacterium sp. 4-46  Bacteria  normal  0.0837995  normal  0.255714 
 
 
-
 
NC_008726  Mvan_2989  response regulator receiver protein  34.03 
 
 
146 aa  94  7e-19  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.539609  normal  0.704166 
 
 
-
 
NC_008347  Mmar10_2532  response regulator receiver protein  33.1 
 
 
150 aa  93.6  8e-19  Maricaulis maris MCS10  Bacteria  normal  normal 
 
 
-
 
NC_007650  BTH_II1008  response regulator  33.33 
 
 
150 aa  92.8  1e-18  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0049  response regulator receiver protein  39.42 
 
 
147 aa  93.2  1e-18  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_2630  response regulator receiver domain-containing protein  34.72 
 
 
153 aa  92.4  2e-18  Saccharophagus degradans 2-40  Bacteria  normal  0.0587673  normal 
 
 
-
 
NC_013440  Hoch_1357  response regulator receiver protein  34.31 
 
 
148 aa  92.4  2e-18  Haliangium ochraceum DSM 14365  Bacteria  normal  0.463554  normal  0.0634619 
 
 
-
 
NC_010571  Oter_1549  response regulator receiver protein  34.56 
 
 
146 aa  92.8  2e-18  Opitutus terrae PB90-1  Bacteria  normal  normal  0.681265 
 
 
-
 
NC_011729  PCC7424_0036  response regulator receiver protein  36.17 
 
 
148 aa  92  2e-18  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
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