More than 300 homologs were found in PanDaTox collection
for query gene Sde_0391 on replicon NC_007912
Organism: Saccharophagus degradans 2-40



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007912  Sde_0391  methyl-accepting chemotaxis sensory transducer  100 
 
 
499 aa  994    Saccharophagus degradans 2-40  Bacteria  normal  0.0811848  normal 
 
 
-
 
NC_008321  Shewmr4_2937  methyl-accepting chemotaxis sensory transducer  33.4 
 
 
495 aa  266  4e-70  Shewanella sp. MR-4  Bacteria  hitchhiker  0.000865197  normal  0.384283 
 
 
-
 
NC_009665  Shew185_1142  methyl-accepting chemotaxis sensory transducer  33.4 
 
 
495 aa  266  5e-70  Shewanella baltica OS185  Bacteria  normal  0.0413666  n/a   
 
 
-
 
NC_008577  Shewana3_3116  methyl-accepting chemotaxis sensory transducer  33.4 
 
 
495 aa  265  1e-69  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.00299178  normal 
 
 
-
 
NC_008789  Hhal_0443  methyl-accepting chemotaxis sensory transducer  42 
 
 
541 aa  265  1e-69  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_1082  methyl-accepting chemotaxis sensory transducer  33.4 
 
 
495 aa  264  3e-69  Shewanella baltica OS155  Bacteria  hitchhiker  0.000101058  n/a   
 
 
-
 
NC_011663  Sbal223_3213  methyl-accepting chemotaxis sensory transducer  33.2 
 
 
495 aa  263  6e-69  Shewanella baltica OS223  Bacteria  normal  0.023485  normal 
 
 
-
 
NC_009997  Sbal195_1176  methyl-accepting chemotaxis sensory transducer  33.4 
 
 
495 aa  263  6.999999999999999e-69  Shewanella baltica OS195  Bacteria  hitchhiker  0.00652986  normal 
 
 
-
 
NC_008322  Shewmr7_3019  methyl-accepting chemotaxis sensory transducer  33.4 
 
 
495 aa  263  6.999999999999999e-69  Shewanella sp. MR-7  Bacteria  decreased coverage  0.00108184  normal 
 
 
-
 
NC_010506  Swoo_1310  methyl-accepting chemotaxis sensory transducer  32.73 
 
 
497 aa  256  9e-67  Shewanella woodyi ATCC 51908  Bacteria  normal  0.615607  normal 
 
 
-
 
NC_008700  Sama_0942  putative methyl-accepting chemotaxis sensory transducer  34.3 
 
 
495 aa  253  7e-66  Shewanella amazonensis SB2B  Bacteria  decreased coverage  0.000202207  normal 
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  41.46 
 
 
712 aa  249  1e-64  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  40.85 
 
 
712 aa  244  1.9999999999999999e-63  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  40.88 
 
 
713 aa  244  3e-63  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  40 
 
 
541 aa  241  2.9999999999999997e-62  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_009092  Shew_0808  methyl-accepting chemotaxis sensory transducer  36.46 
 
 
554 aa  237  3e-61  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  42.51 
 
 
716 aa  237  4e-61  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_013457  VEA_001423  methyl-accepting chemotaxis protein  42.6 
 
 
623 aa  236  7e-61  Vibrio sp. Ex25  Bacteria  normal  0.896179  n/a   
 
 
-
 
NC_004578  PSPTO_3379  methyl-accepting chemotaxis protein  38.42 
 
 
559 aa  234  4.0000000000000004e-60  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_2346  methyl-accepting chemotaxis sensory transducer  39.67 
 
 
564 aa  231  2e-59  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_3200  methyl-accepting chemotaxis sensory transducer  39.23 
 
 
554 aa  230  4e-59  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_0824  methyl-accepting chemotaxis sensory transducer  41.67 
 
 
554 aa  230  4e-59  Shewanella sp. MR-4  Bacteria  normal  hitchhiker  0.00067966 
 
 
-
 
NC_008577  Shewana3_3611  methyl-accepting chemotaxis sensory transducer  38.92 
 
 
634 aa  229  7e-59  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_4053  methyl-accepting chemotaxis protein  40.7 
 
 
634 aa  229  8e-59  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009784  VIBHAR_06314  histidine kinase  40.75 
 
 
623 aa  229  9e-59  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  36.59 
 
 
637 aa  229  9e-59  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_008577  Shewana3_3299  methyl-accepting chemotaxis sensory transducer  41.27 
 
 
554 aa  229  1e-58  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_2544  methyl-accepting chemotaxis sensory transducer  37.06 
 
 
633 aa  228  2e-58  Shewanella baltica OS185  Bacteria  hitchhiker  0.00517521  n/a   
 
 
-
 
NC_008463  PA14_29800  putative chemotaxis transducer  42.2 
 
 
561 aa  228  3e-58  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  decreased coverage  0.00431462  normal 
 
 
-
 
NC_009439  Pmen_2000  methyl-accepting chemotaxis sensory transducer  41.38 
 
 
560 aa  226  5.0000000000000005e-58  Pseudomonas mendocina ymp  Bacteria  normal  0.0144557  normal  0.0324669 
 
 
-
 
NC_008322  Shewmr7_3199  methyl-accepting chemotaxis sensory transducer  41.27 
 
 
554 aa  227  5.0000000000000005e-58  Shewanella sp. MR-7  Bacteria  normal  normal  0.927661 
 
 
-
 
NC_009831  Ssed_3705  methyl-accepting chemotaxis sensory transducer  38.92 
 
 
541 aa  226  6e-58  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0963791  normal 
 
 
-
 
NC_009092  Shew_0237  methyl-accepting chemotaxis sensory transducer  35.45 
 
 
632 aa  226  6e-58  Shewanella loihica PV-4  Bacteria  normal  normal  0.997473 
 
 
-
 
NC_007492  Pfl01_0450  chemotaxis sensory transducer  35.53 
 
 
645 aa  226  1e-57  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_013889  TK90_1029  methyl-accepting chemotaxis sensory transducer  36.81 
 
 
411 aa  225  2e-57  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_0987  methyl-accepting chemotaxis protein  42.04 
 
 
554 aa  224  3e-57  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_013457  VEA_001073  N-acetylglucosamine regulated methyl-accepting chemotaxis protein  37.71 
 
 
628 aa  223  4.9999999999999996e-57  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_2548  putative chemotaxis transducer  41.9 
 
 
561 aa  223  4.9999999999999996e-57  Pseudomonas aeruginosa PA7  Bacteria  normal  0.271227  n/a   
 
 
-
 
NC_009052  Sbal_0870  methyl-accepting chemotaxis sensory transducer  41.79 
 
 
554 aa  223  4.9999999999999996e-57  Shewanella baltica OS155  Bacteria  normal  0.0571565  n/a   
 
 
-
 
NC_009831  Ssed_4216  methyl-accepting chemotaxis sensory transducer  36.69 
 
 
647 aa  223  4.9999999999999996e-57  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_007954  Sden_2955  chemotaxis sensory transducer  35.95 
 
 
497 aa  223  6e-57  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_2154  methyl-accepting chemotaxis sensory transducer  40.11 
 
 
627 aa  223  7e-57  Pseudomonas mendocina ymp  Bacteria  normal  0.0789614  normal  0.507372 
 
 
-
 
NC_009665  Shew185_3494  methyl-accepting chemotaxis sensory transducer  41.32 
 
 
554 aa  223  7e-57  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_2650  methyl-accepting chemotaxis sensory transducer  37.85 
 
 
568 aa  222  9.999999999999999e-57  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_3617  methyl-accepting chemotaxis sensory transducer  41.79 
 
 
554 aa  222  9.999999999999999e-57  Shewanella baltica OS195  Bacteria  normal  normal  0.964358 
 
 
-
 
NC_009457  VC0395_A2659  methyl-accepting chemotaxis protein  39.22 
 
 
556 aa  222  9.999999999999999e-57  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3422  methyl-accepting chemotaxis sensory transducer with Cache sensor  41.32 
 
 
554 aa  221  1.9999999999999999e-56  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_2249  methyl-accepting chemotaxis transducer  37.43 
 
 
643 aa  221  1.9999999999999999e-56  Pseudomonas putida KT2440  Bacteria  normal  0.477129  normal  0.786945 
 
 
-
 
NC_009656  PSPA7_4877  chemotactic transducer PctB  37.5 
 
 
629 aa  221  1.9999999999999999e-56  Pseudomonas aeruginosa PA7  Bacteria  normal  0.164155  n/a   
 
 
-
 
NC_007912  Sde_0081  putative methyl-accepting chemotaxis sensory transducer  40.28 
 
 
544 aa  221  1.9999999999999999e-56  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_013889  TK90_2562  methyl-accepting chemotaxis sensory transducer  38.75 
 
 
671 aa  221  1.9999999999999999e-56  Thioalkalivibrio sp. K90mix  Bacteria  normal  hitchhiker  0.0046581 
 
 
-
 
NC_008463  PA14_55960  chemotactic transducer PctC  36.77 
 
 
632 aa  221  1.9999999999999999e-56  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.289325  normal 
 
 
-
 
NC_008463  PA14_56010  chemotactic transducer PctB  37.5 
 
 
629 aa  221  1.9999999999999999e-56  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_1998  methyl-accepting chemotaxis sensory transducer  42.51 
 
 
714 aa  221  3e-56  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.0164438 
 
 
-
 
NC_008700  Sama_2880  putative methyl-accepting chemotaxis sensory transducer  35.92 
 
 
558 aa  221  3e-56  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  36.46 
 
 
638 aa  221  3e-56  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_008463  PA14_29760  putative chemotaxis transducer  41.96 
 
 
714 aa  221  3e-56  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_4874  chemotactic transducer PctC  37.15 
 
 
632 aa  220  3.9999999999999997e-56  Pseudomonas aeruginosa PA7  Bacteria  normal  0.153332  n/a   
 
 
-
 
NC_009656  PSPA7_2546  putative chemotaxis transducer  41.96 
 
 
714 aa  220  5e-56  Pseudomonas aeruginosa PA7  Bacteria  normal  0.410637  n/a   
 
 
-
 
NC_009512  Pput_3489  methyl-accepting chemotaxis sensory transducer  37.43 
 
 
628 aa  220  6e-56  Pseudomonas putida F1  Bacteria  normal  0.228387  normal 
 
 
-
 
NC_009438  Sputcn32_0619  methyl-accepting chemotaxis sensory transducer  39.94 
 
 
634 aa  220  6e-56  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_0354  chemotaxis sensory transducer, Cache sensor  37.78 
 
 
630 aa  220  6e-56  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_1880  methyl-accepting chemotaxis sensory transducer with Cache sensor  37.43 
 
 
628 aa  219  7.999999999999999e-56  Pseudomonas putida GB-1  Bacteria  normal  0.454316  normal 
 
 
-
 
NC_009831  Ssed_3532  methyl-accepting chemotaxis sensory transducer  40.06 
 
 
555 aa  219  7.999999999999999e-56  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_013456  VEA_003896  methyl-accepting chemotaxis protein  39.03 
 
 
545 aa  219  7.999999999999999e-56  Vibrio sp. Ex25  Bacteria  decreased coverage  0.000288698  n/a   
 
 
-
 
NC_009439  Pmen_3309  methyl-accepting chemotaxis sensory transducer  38.37 
 
 
625 aa  219  8.999999999999998e-56  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.776822 
 
 
-
 
NC_009997  Sbal195_3789  methyl-accepting chemotaxis sensory transducer  41.07 
 
 
554 aa  219  1e-55  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_0641  methyl-accepting chemotaxis sensory transducer  41.07 
 
 
568 aa  219  1e-55  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_0657  chemotaxis sensory transducer, Cache sensor  37.61 
 
 
648 aa  219  1e-55  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.511779  normal 
 
 
-
 
NC_009665  Shew185_3666  methyl-accepting chemotaxis sensory transducer  40.41 
 
 
554 aa  219  1e-55  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_0425  methyl-accepting chemotaxis sensory transducer with Cache sensor  35.47 
 
 
630 aa  218  2e-55  Pseudomonas putida W619  Bacteria  normal  0.461628  normal 
 
 
-
 
NC_011663  Sbal223_3601  methyl-accepting chemotaxis sensory transducer with Cache sensor  41.07 
 
 
554 aa  218  2e-55  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_3491  methyl-accepting chemotaxis sensory transducer  40.7 
 
 
554 aa  218  2.9999999999999998e-55  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_3323  methyl-accepting chemotaxis sensory transducer  40.7 
 
 
554 aa  218  2.9999999999999998e-55  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_4382  chemotaxis sensory transducer  38.79 
 
 
738 aa  217  4e-55  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.218372 
 
 
-
 
NC_009438  Sputcn32_3052  methyl-accepting chemotaxis sensory transducer  40.7 
 
 
554 aa  216  7e-55  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_3477  putative methyl-accepting chemotaxis protein  41.36 
 
 
622 aa  216  7e-55  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.000522984 
 
 
-
 
NC_008322  Shewmr7_0630  methyl-accepting chemotaxis sensory transducer  42.76 
 
 
554 aa  216  8e-55  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_4431  chemotaxis sensory transducer, Cache sensor  37.71 
 
 
629 aa  216  9e-55  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_4887  methyl-accepting chemotaxis sensory transducer  37 
 
 
645 aa  215  9.999999999999999e-55  Pseudomonas putida W619  Bacteria  normal  normal  0.658451 
 
 
-
 
NC_007005  Psyr_2220  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  37.14 
 
 
646 aa  215  9.999999999999999e-55  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.071358  normal  0.520396 
 
 
-
 
NC_007005  Psyr_3114  histidine kinase, HAMP region: chemotaxis sensory transducer  38.64 
 
 
541 aa  215  9.999999999999999e-55  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.860602  normal 
 
 
-
 
NC_007492  Pfl01_0124  chemotaxis sensory transducer, Cache sensor  34.96 
 
 
626 aa  215  9.999999999999999e-55  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.201174  normal 
 
 
-
 
NC_007492  Pfl01_3770  chemotaxis sensory transducer  39.24 
 
 
715 aa  216  9.999999999999999e-55  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_2471  methyl-accepting chemotaxis sensory transducer  40.46 
 
 
425 aa  216  9.999999999999999e-55  Pseudomonas mendocina ymp  Bacteria  normal  0.817651  normal 
 
 
-
 
NC_009831  Ssed_4463  methyl-accepting chemotaxis sensory transducer  40.34 
 
 
552 aa  215  9.999999999999999e-55  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.43301 
 
 
-
 
NC_009092  Shew_0085  methyl-accepting chemotaxis sensory transducer  36.41 
 
 
638 aa  216  9.999999999999999e-55  Shewanella loihica PV-4  Bacteria  normal  0.0647334  normal 
 
 
-
 
NC_009439  Pmen_0734  methyl-accepting chemotaxis sensory transducer  38.32 
 
 
643 aa  215  1.9999999999999998e-54  Pseudomonas mendocina ymp  Bacteria  normal  0.770301  normal 
 
 
-
 
NC_010501  PputW619_4403  methyl-accepting chemotaxis sensory transducer  37.8 
 
 
670 aa  214  1.9999999999999998e-54  Pseudomonas putida W619  Bacteria  normal  0.604884  normal 
 
 
-
 
NC_011901  Tgr7_2492  methyl-accepting chemotaxis sensory transducer  42.37 
 
 
572 aa  214  1.9999999999999998e-54  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_0173  methyl-accepting chemotaxis protein  37.53 
 
 
639 aa  215  1.9999999999999998e-54  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_011312  VSAL_I2193  methyl-accepting chemotaxis protein  38.16 
 
 
697 aa  214  2.9999999999999995e-54  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_2448  methyl-accepting chemotaxis protein  36.86 
 
 
646 aa  214  2.9999999999999995e-54  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.718596  n/a   
 
 
-
 
NC_009784  VIBHAR_04784  histidine kinase  36.78 
 
 
628 aa  214  2.9999999999999995e-54  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011663  Sbal223_3382  methyl-accepting chemotaxis sensory transducer  36.19 
 
 
543 aa  214  3.9999999999999995e-54  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_2789  methyl-accepting chemotaxis sensory transducer  36.39 
 
 
545 aa  214  3.9999999999999995e-54  Marinobacter aquaeolei VT8  Bacteria  normal  0.888266  n/a   
 
 
-
 
NC_010322  PputGB1_0343  methyl-accepting chemotaxis sensory transducer  36.36 
 
 
645 aa  214  3.9999999999999995e-54  Pseudomonas putida GB-1  Bacteria  normal  0.675969  normal 
 
 
-
 
NC_009665  Shew185_3455  methyl-accepting chemotaxis sensory transducer  36.19 
 
 
543 aa  214  3.9999999999999995e-54  Shewanella baltica OS185  Bacteria  normal  0.0121993  n/a   
 
 
-
 
NC_009831  Ssed_0837  methyl-accepting chemotaxis sensory transducer  38.06 
 
 
554 aa  213  4.9999999999999996e-54  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_0924  methyl-accepting chemotaxis sensory transducer  36.19 
 
 
543 aa  213  4.9999999999999996e-54  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
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