47 homologs were found in PanDaTox collection
for query gene SbBS512_E2624 on replicon NC_010658
Organism: Shigella boydii CDC 3083-94



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
CP001637  EcDH1_1417  glycerol-3-phosphate dehydrogenase, anaerobic, B subunit  98.57 
 
 
419 aa  837    Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_02127  hypothetical protein  99.52 
 
 
419 aa  843    Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_3379  anaerobic glycerol-3-phosphate dehydrogenase subunit B  98.09 
 
 
419 aa  835    Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A2629  anaerobic glycerol-3-phosphate dehydrogenase subunit B  81.15 
 
 
419 aa  677    Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.513641  normal  0.469709 
 
 
-
 
NC_011149  SeAg_B2421  anaerobic glycerol-3-phosphate dehydrogenase subunit B  80.91 
 
 
419 aa  672    Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A2513  anaerobic glycerol-3-phosphate dehydrogenase subunit B  81.15 
 
 
419 aa  676    Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.872346  normal 
 
 
-
 
NC_011083  SeHA_C2525  anaerobic glycerol-3-phosphate dehydrogenase subunit B  80.91 
 
 
419 aa  672    Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_011080  SNSL254_A2470  anaerobic glycerol-3-phosphate dehydrogenase subunit B  80.91 
 
 
419 aa  672    Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.827819  normal  0.481861 
 
 
-
 
NC_010658  SbBS512_E2624  anaerobic glycerol-3-phosphate dehydrogenase subunit B  100 
 
 
419 aa  848    Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_2394  anaerobic glycerol-3-phosphate dehydrogenase subunit B  98.09 
 
 
419 aa  836    Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_010468  EcolC_1409  anaerobic glycerol-3-phosphate dehydrogenase subunit B  98.57 
 
 
419 aa  837    Escherichia coli ATCC 8739  Bacteria  normal  0.898799  normal  0.665816 
 
 
-
 
NC_009801  EcE24377A_2540  anaerobic glycerol-3-phosphate dehydrogenase subunit B  98.57 
 
 
419 aa  838    Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A2383  anaerobic glycerol-3-phosphate dehydrogenase subunit B  99.52 
 
 
419 aa  843    Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
CP001509  ECD_02168  anaerobic glycerol-3-phosphate dehydrogenase subunit B  99.52 
 
 
419 aa  843    Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_2806  anaerobic glycerol-3-phosphate dehydrogenase subunit B  66.59 
 
 
419 aa  583  1.0000000000000001e-165  Enterobacter sp. 638  Bacteria  normal  0.69371  normal  0.639346 
 
 
-
 
NC_009832  Spro_0201  anaerobic glycerol-3-phosphate dehydrogenase subunit B  52.04 
 
 
424 aa  394  1e-108  Serratia proteamaculans 568  Bacteria  normal  normal  0.0138724 
 
 
-
 
NC_012917  PC1_3956  anaerobic glycerol-3-phosphate dehydrogenase subunit B  49.4 
 
 
420 aa  387  1e-106  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_4147  anaerobic glycerol-3-phosphate dehydrogenase subunit B  48.43 
 
 
420 aa  355  6.999999999999999e-97  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_0228  anaerobic glycerol-3-phosphate dehydrogenase subunit B  49.52 
 
 
424 aa  344  2e-93  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A0566  anaerobic glycerol-3-phosphate dehydrogenase subunit B  49.52 
 
 
424 aa  344  2e-93  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_010465  YPK_3990  anaerobic glycerol-3-phosphate dehydrogenase subunit B  49.52 
 
 
424 aa  343  2.9999999999999997e-93  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.523748  n/a   
 
 
-
 
NC_012912  Dd1591_0201  anaerobic glycerol-3-phosphate dehydrogenase subunit B  46.06 
 
 
416 aa  337  2.9999999999999997e-91  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_0249  anaerobic glycerol-3-phosphate dehydrogenase subunit B  45.78 
 
 
418 aa  336  5e-91  Dickeya dadantii Ech703  Bacteria  normal  0.084897  n/a   
 
 
-
 
NC_008309  HS_0513  anaerobic glycerol-3-phosphate dehydrogenase subunit B  40.52 
 
 
432 aa  318  1e-85  Haemophilus somnus 129PT  Bacteria  normal  0.171516  n/a   
 
 
-
 
NC_011313  VSAL_II0396  anaerobic glycerol-3-phosphate dehydrogenase subunit B  37.3 
 
 
452 aa  304  2.0000000000000002e-81  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_0687  anaerobic glycerol-3-phosphate dehydrogenase subunit B  38.24 
 
 
436 aa  286  7e-76  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1020  anaerobic glycerol-3-phosphate dehydrogenase subunit B  35.75 
 
 
446 aa  240  2.9999999999999997e-62  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_013158  Huta_1470  anaerobic glycerol-3-phosphate dehydrogenase subunit B  28.14 
 
 
430 aa  158  2e-37  Halorhabdus utahensis DSM 12940  Archaea  normal  n/a   
 
 
-
 
NC_013223  Dret_2101  anaerobic glycerol-3-phosphate dehydrogenase subunit B  28.64 
 
 
424 aa  140  4.999999999999999e-32  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal  0.20171 
 
 
-
 
NC_013202  Hmuk_2517  anaerobic glycerol-3-phosphate dehydrogenase subunit B  26.59 
 
 
422 aa  132  1.0000000000000001e-29  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal  0.113743 
 
 
-
 
NC_008554  Sfum_3498  anaerobic glycerol-3-phosphate dehydrogenase subunit B  29.27 
 
 
432 aa  130  3e-29  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.435749 
 
 
-
 
NC_011831  Cagg_0070  anaerobic glycerol-3-phosphate dehydrogenase subunit B  27.96 
 
 
412 aa  127  4.0000000000000003e-28  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_1437  anaerobic glycerol-3-phosphate dehydrogenase subunit B  26.9 
 
 
415 aa  123  6e-27  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.200497  n/a   
 
 
-
 
NC_008751  Dvul_1229  anaerobic glycerol-3-phosphate dehydrogenase subunit B  27.23 
 
 
427 aa  121  1.9999999999999998e-26  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_011883  Ddes_1520  anaerobic glycerol-3-phosphate dehydrogenase subunit B  27.23 
 
 
428 aa  118  1.9999999999999998e-25  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.0570391  n/a   
 
 
-
 
NC_009767  Rcas_4112  anaerobic glycerol-3-phosphate dehydrogenase subunit B  26.67 
 
 
414 aa  117  5e-25  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.889687  normal  0.0200545 
 
 
-
 
NC_009253  Dred_2843  anaerobic glycerol-3-phosphate dehydrogenase subunit B  25.46 
 
 
420 aa  112  1.0000000000000001e-23  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.00580036  n/a   
 
 
-
 
NC_012029  Hlac_1124  anaerobic glycerol-3-phosphate dehydrogenase subunit B  24.73 
 
 
459 aa  112  1.0000000000000001e-23  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  normal 
 
 
-
 
NC_009972  Haur_3389  anaerobic glycerol-3-phosphate dehydrogenase subunit B  26.46 
 
 
402 aa  108  1e-22  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013743  Htur_2961  glycerol-3-phosphate dehydrogenase, anaerobic, B subunit  27.06 
 
 
442 aa  108  3e-22  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_013922  Nmag_0932  glycerol-3-phosphate dehydrogenase, anaerobic, B subunit  27.82 
 
 
449 aa  102  9e-21  Natrialba magadii ATCC 43099  Archaea  normal  0.138789  n/a   
 
 
-
 
NC_009523  RoseRS_3300  anaerobic glycerol-3-phosphate dehydrogenase subunit B  26.25 
 
 
414 aa  94.4  3e-18  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_011145  AnaeK_1318  anaerobic glycerol-3-phosphate dehydrogenase subunit B  27.27 
 
 
436 aa  52.8  0.00001  Anaeromyxobacter sp. K  Bacteria  normal  0.119558  n/a   
 
 
-
 
NC_007760  Adeh_2531  anaerobic glycerol-3-phosphate dehydrogenase subunit B  28.6 
 
 
436 aa  51.2  0.00003  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.14571  n/a   
 
 
-
 
NC_009675  Anae109_1337  anaerobic glycerol-3-phosphate dehydrogenase subunit B  38.89 
 
 
436 aa  49.7  0.0001  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.766172 
 
 
-
 
NC_011891  A2cp1_1420  anaerobic glycerol-3-phosphate dehydrogenase subunit B  27.8 
 
 
436 aa  45.8  0.002  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011126  HY04AAS1_0593  L-aspartate oxidase  23.53 
 
 
511 aa  44.7  0.003  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  0.827824  n/a   
 
 
-
 
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