5 homologs were found in PanDaTox collection
for query gene SbBS512_A0041 on replicon NC_010660
Organism: Shigella boydii CDC 3083-94



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010660  SbBS512_A0041  IpgB2  100 
 
 
188 aa  384  1e-106  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_1815  EspM3 protein  41.71 
 
 
196 aa  161  5.0000000000000005e-39  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.293679  hitchhiker  0.000000000899554 
 
 
-
 
NC_011353  ECH74115_3866  EspM3 protein  45.74 
 
 
138 aa  124  7e-28  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal  0.881056 
 
 
-
 
NC_011353  ECH74115_5057  Map protein  31.01 
 
 
161 aa  73.9  0.000000000001  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal  0.826147 
 
 
-
 
NC_010660  SbBS512_A0162  IpgB1  26.55 
 
 
208 aa  42.4  0.004  Shigella boydii CDC 3083-94  Bacteria  normal  0.242779  n/a   
 
 
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