More than 300 homologs were found in PanDaTox collection
for query gene Saro_3638 on replicon NC_009427
Organism: Novosphingobium aromaticivorans DSM 12444



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009427  Saro_3638  short-chain dehydrogenase/reductase SDR  100 
 
 
249 aa  492  9.999999999999999e-139  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.695001  n/a   
 
 
-
 
NC_009511  Swit_3303  short-chain dehydrogenase/reductase SDR  66.39 
 
 
252 aa  299  3e-80  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.0379988 
 
 
-
 
NC_010552  BamMC406_4661  short-chain dehydrogenase/reductase SDR  47.33 
 
 
251 aa  191  1e-47  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B3149  Short-chain dehydrogenase/reductase SDR  41.87 
 
 
240 aa  167  1e-40  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_2448  short-chain dehydrogenase/reductase SDR  40.98 
 
 
263 aa  162  5.0000000000000005e-39  Sinorhizobium medicae WSM419  Bacteria  normal  0.117337  normal 
 
 
-
 
NC_008061  Bcen_5134  short-chain dehydrogenase/reductase SDR  40.65 
 
 
240 aa  161  9e-39  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.819971  n/a   
 
 
-
 
NC_008254  Meso_3153  short-chain dehydrogenase/reductase SDR  41.22 
 
 
259 aa  161  9e-39  Chelativorans sp. BNC1  Bacteria  normal  0.550074  n/a   
 
 
-
 
NC_008543  Bcen2424_5725  short-chain dehydrogenase/reductase SDR  40.65 
 
 
240 aa  161  9e-39  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_2472  short-chain dehydrogenase/reductase SDR  40.16 
 
 
252 aa  160  2e-38  Sinorhizobium medicae WSM419  Bacteria  normal  0.117337  normal 
 
 
-
 
NC_010086  Bmul_5305  short-chain dehydrogenase/reductase SDR  39.02 
 
 
240 aa  160  2e-38  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.0723888  normal 
 
 
-
 
NC_010552  BamMC406_3141  short-chain dehydrogenase/reductase SDR  40.24 
 
 
240 aa  159  3e-38  Burkholderia ambifaria MC40-6  Bacteria  normal  0.76943  normal 
 
 
-
 
NC_008463  PA14_10890  putative short-chain dehydrogenase  42.17 
 
 
241 aa  158  8e-38  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0306888  normal 
 
 
-
 
NC_010515  Bcenmc03_4498  short-chain dehydrogenase/reductase SDR  39.43 
 
 
240 aa  158  9e-38  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_1460  short-chain dehydrogenase/reductase SDR  41.74 
 
 
235 aa  156  3e-37  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_0999  putative short-chain dehydrogenase  41.13 
 
 
241 aa  145  6e-34  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_0371  short-chain dehydrogenase/reductase SDR  39.27 
 
 
245 aa  144  9e-34  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.5049  normal 
 
 
-
 
NC_007493  RSP_2160  Short-chain dehydrogenase/reductase  36.95 
 
 
254 aa  144  1e-33  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009668  Oant_3576  short-chain dehydrogenase/reductase SDR  36.61 
 
 
257 aa  144  1e-33  Ochrobactrum anthropi ATCC 49188  Bacteria  hitchhiker  0.000680094  n/a   
 
 
-
 
NC_009049  Rsph17029_0834  short-chain dehydrogenase/reductase SDR  36.95 
 
 
254 aa  143  2e-33  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_6963  putative 3-oxoacyl-acyl carrier protein reductase  41.87 
 
 
244 aa  142  5e-33  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.10096  normal 
 
 
-
 
NC_011004  Rpal_0964  short-chain dehydrogenase/reductase SDR  39.02 
 
 
244 aa  140  9.999999999999999e-33  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.959016  n/a   
 
 
-
 
NC_007958  RPD_4365  short-chain dehydrogenase/reductase SDR  40.24 
 
 
268 aa  140  1.9999999999999998e-32  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.256895  normal 
 
 
-
 
NC_008010  Dgeo_2865  short-chain dehydrogenase/reductase SDR  41.63 
 
 
255 aa  140  1.9999999999999998e-32  Deinococcus geothermalis DSM 11300  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_4757  short-chain dehydrogenase/reductase SDR  41.39 
 
 
236 aa  139  4.999999999999999e-32  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_009621  Smed_6315  short-chain dehydrogenase/reductase SDR  35.91 
 
 
255 aa  138  7.999999999999999e-32  Sinorhizobium medicae WSM419  Bacteria  normal  0.24294  normal 
 
 
-
 
NC_007778  RPB_4527  3-oxoacyl-acyl carrier protein reductase  39.43 
 
 
244 aa  137  1e-31  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_3054  oxidoreductase, short chain dehydrogenase/reductase family  38.02 
 
 
243 aa  136  4e-31  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.106955  n/a   
 
 
-
 
NC_012669  Bcav_2143  short-chain dehydrogenase/reductase SDR  35.66 
 
 
251 aa  135  4e-31  Beutenbergia cavernae DSM 12333  Bacteria  decreased coverage  0.00162277  normal 
 
 
-
 
NC_013730  Slin_6198  short-chain dehydrogenase/reductase SDR  36.03 
 
 
260 aa  135  5e-31  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_3342  short-chain dehydrogenase/reductase SDR  36.78 
 
 
239 aa  134  9.999999999999999e-31  Polaromonas sp. JS666  Bacteria  normal  0.472803  normal 
 
 
-
 
NC_013743  Htur_0514  short-chain dehydrogenase/reductase SDR  35.22 
 
 
252 aa  134  9.999999999999999e-31  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_007511  Bcep18194_B1406  Short-chain dehydrogenase/reductase SDR  34.52 
 
 
251 aa  134  1.9999999999999998e-30  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_1711  short-chain dehydrogenase/reductase SDR  36.47 
 
 
251 aa  134  1.9999999999999998e-30  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.0326295 
 
 
-
 
NC_010552  BamMC406_4719  short chain dehydrogenase  38.34 
 
 
252 aa  133  1.9999999999999998e-30  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.358577 
 
 
-
 
NC_008781  Pnap_1241  short-chain dehydrogenase/reductase SDR  36.86 
 
 
260 aa  133  1.9999999999999998e-30  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.0407787  normal  0.415093 
 
 
-
 
NC_009636  Smed_2459  short-chain dehydrogenase/reductase SDR  36.9 
 
 
264 aa  133  3e-30  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_007347  Reut_A1512  short chain dehydrogenase  36.36 
 
 
262 aa  132  6e-30  Ralstonia eutropha JMP134  Bacteria  normal  0.538743  n/a   
 
 
-
 
NC_010524  Lcho_1203  short-chain dehydrogenase/reductase SDR  39.6 
 
 
265 aa  132  6e-30  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_011894  Mnod_2717  short-chain dehydrogenase/reductase SDR  40 
 
 
241 aa  132  6e-30  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_2133  2-deoxy-D-gluconate 3-dehydrogenase  39.51 
 
 
241 aa  132  6.999999999999999e-30  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.617453 
 
 
-
 
NC_009486  Tpet_1020  3-oxoacyl-(acyl-carrier-protein) reductase  35.46 
 
 
246 aa  131  1.0000000000000001e-29  Thermotoga petrophila RKU-1  Bacteria  normal  0.0122832  n/a   
 
 
-
 
NC_010483  TRQ2_1110  3-oxoacyl-(acyl-carrier-protein) reductase  34.52 
 
 
246 aa  130  2.0000000000000002e-29  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_010644  Emin_0659  3-oxoacyl-(acyl-carrier-protein) reductase  35.37 
 
 
245 aa  130  2.0000000000000002e-29  Elusimicrobium minutum Pei191  Bacteria  normal  0.372694  normal 
 
 
-
 
NC_010581  Bind_2299  3-oxoacyl-(acyl-carrier-protein) reductase  37.25 
 
 
245 aa  130  2.0000000000000002e-29  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_2089  short-chain dehydrogenase/reductase SDR  33.98 
 
 
276 aa  130  2.0000000000000002e-29  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.185872  hitchhiker  0.0000125896 
 
 
-
 
NC_008391  Bamb_4196  short chain dehydrogenase  37.94 
 
 
252 aa  130  2.0000000000000002e-29  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_010730  SYO3AOP1_1671  3-oxoacyl-(acyl-carrier-protein) reductase  33.6 
 
 
246 aa  130  2.0000000000000002e-29  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_1887  short-chain dehydrogenase/reductase SDR  36.18 
 
 
243 aa  130  2.0000000000000002e-29  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_0154  short-chain dehydrogenase/reductase SDR  39.2 
 
 
255 aa  130  2.0000000000000002e-29  Meiothermus silvanus DSM 9946  Bacteria  normal  0.649375  normal  0.270956 
 
 
-
 
NC_007493  RSP_0481  2-deoxy-D-gluconate 3-dehydrogenase  39.09 
 
 
241 aa  129  4.0000000000000003e-29  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_0075  short-chain dehydrogenase/reductase SDR  31.28 
 
 
250 aa  129  4.0000000000000003e-29  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_007953  Bxe_C0616  putative short-chain dehydrogenase/reductase  37.65 
 
 
245 aa  129  5.0000000000000004e-29  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.113421 
 
 
-
 
NC_009427  Saro_3749  short chain dehydrogenase  37.14 
 
 
254 aa  129  5.0000000000000004e-29  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_1258  short-chain dehydrogenase/reductase SDR  37.76 
 
 
247 aa  129  6e-29  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.203668  normal 
 
 
-
 
NC_008752  Aave_2790  short-chain dehydrogenase/reductase SDR  37.6 
 
 
269 aa  128  7.000000000000001e-29  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_012034  Athe_1156  3-oxoacyl-(acyl-carrier-protein) reductase  33.06 
 
 
248 aa  128  8.000000000000001e-29  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.0000000536759  n/a   
 
 
-
 
NC_009428  Rsph17025_2406  2-deoxy-D-gluconate 3-dehydrogenase  39.75 
 
 
241 aa  128  8.000000000000001e-29  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.358722 
 
 
-
 
NC_013501  Rmar_2801  3-oxoacyl-(acyl-carrier-protein) reductase  36.76 
 
 
249 aa  128  1.0000000000000001e-28  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_006349  BMAA0606  short chain dehydrogenase  36.36 
 
 
265 aa  127  2.0000000000000002e-28  Burkholderia mallei ATCC 23344  Bacteria  normal  0.289606  n/a   
 
 
-
 
NC_008835  BMA10229_0861  short chain dehydrogenase  36.36 
 
 
284 aa  127  2.0000000000000002e-28  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B5464  NAD-dependent epimerase/dehydratase:Short-chain dehydrogenase/reductase SDR  34.3 
 
 
253 aa  127  2.0000000000000002e-28  Ralstonia eutropha JMP134  Bacteria  normal  0.852927  n/a   
 
 
-
 
NC_007435  BURPS1710b_A2338  short chain dehydrogenase  36.36 
 
 
265 aa  127  2.0000000000000002e-28  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_3536  short-chain dehydrogenase/reductase SDR  36.58 
 
 
274 aa  127  2.0000000000000002e-28  Polaromonas sp. JS666  Bacteria  normal  normal  0.446578 
 
 
-
 
NC_010505  Mrad2831_1756  short-chain dehydrogenase/reductase SDR  35.32 
 
 
256 aa  127  2.0000000000000002e-28  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_1897  3-oxoacyl-(acyl-carrier-protein) reductase  38.1 
 
 
245 aa  127  2.0000000000000002e-28  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  hitchhiker  0.000114593 
 
 
-
 
NC_008146  Mmcs_4927  short-chain dehydrogenase/reductase SDR  38.56 
 
 
239 aa  127  2.0000000000000002e-28  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1037  short chain dehydrogenase  36.36 
 
 
284 aa  127  2.0000000000000002e-28  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A1828  short chain dehydrogenase  36.36 
 
 
284 aa  127  2.0000000000000002e-28  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_5015  short-chain dehydrogenase/reductase SDR  38.56 
 
 
239 aa  127  2.0000000000000002e-28  Mycobacterium sp. KMS  Bacteria  normal  normal  0.920793 
 
 
-
 
NC_009075  BURPS668_A1123  short chain dehydrogenase  36.36 
 
 
298 aa  126  3e-28  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_010086  Bmul_4276  short chain dehydrogenase  36.74 
 
 
265 aa  126  3e-28  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.222257  normal 
 
 
-
 
NC_009513  Lreu_0988  short-chain dehydrogenase/reductase SDR  34.29 
 
 
244 aa  126  3e-28  Lactobacillus reuteri DSM 20016  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_1994  short-chain dehydrogenase/reductase SDR  33.61 
 
 
245 aa  126  4.0000000000000003e-28  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A0416  3-oxoacyl-[acyl-carrier-protein] reductase  34.92 
 
 
245 aa  125  4.0000000000000003e-28  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_0339  short chain dehydrogenase  34.01 
 
 
245 aa  126  4.0000000000000003e-28  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0904  Short-chain dehydrogenase/reductase SDR  36.36 
 
 
254 aa  125  5e-28  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_5308  short-chain dehydrogenase/reductase SDR  37.39 
 
 
239 aa  125  5e-28  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_2046  short-chain dehydrogenase/reductase SDR  35.95 
 
 
263 aa  125  5e-28  Acidovorax sp. JS42  Bacteria  decreased coverage  0.00404736  normal 
 
 
-
 
NC_009429  Rsph17025_3588  hypothetical protein  38.46 
 
 
254 aa  125  5e-28  Rhodobacter sphaeroides ATCC 17025  Bacteria  decreased coverage  0.00208776  normal  0.410255 
 
 
-
 
NC_003910  CPS_1680  short chain dehydrogenase/reductase family oxidoreductase  35.18 
 
 
251 aa  125  6e-28  Colwellia psychrerythraea 34H  Bacteria  normal  0.447885  n/a   
 
 
-
 
NC_007492  Pfl01_2721  Short-chain dehydrogenase/reductase SDR  37.85 
 
 
249 aa  125  6e-28  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_3001  short-chain dehydrogenase/reductase SDR  37.45 
 
 
249 aa  125  6e-28  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_4285  short chain dehydrogenase/reductase family oxidoreductase  33.06 
 
 
249 aa  125  6e-28  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_1056  oxidoreductase, short chain dehydrogenase/reductase family  37.15 
 
 
254 aa  125  8.000000000000001e-28  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_2239  short-chain dehydrogenase/reductase SDR  35.83 
 
 
250 aa  124  1e-27  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_1751  Short-chain dehydrogenase/reductase SDR  33.47 
 
 
257 aa  124  1e-27  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.0168825 
 
 
-
 
NC_008261  CPF_1326  3-ketoacyl-(acyl-carrier-protein) reductase  34.69 
 
 
246 aa  124  1e-27  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_0253  short-chain dehydrogenase/reductase SDR  37.4 
 
 
241 aa  124  1e-27  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_1790  short-chain dehydrogenase/reductase SDR  35.04 
 
 
255 aa  124  1e-27  Arthrobacter sp. FB24  Bacteria  normal  0.0755029  n/a   
 
 
-
 
NC_014158  Tpau_3825  short-chain dehydrogenase/reductase SDR  35.77 
 
 
261 aa  124  1e-27  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_4381  short-chain dehydrogenase/reductase SDR  37.25 
 
 
254 aa  124  1e-27  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_1869  short-chain dehydrogenase/reductase SDR  35.54 
 
 
263 aa  124  2e-27  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_0608  short-chain dehydrogenase/reductase SDR  32.81 
 
 
251 aa  124  2e-27  Thermotoga sp. RQ2  Bacteria  normal  0.236394  n/a   
 
 
-
 
NC_009485  BBta_3818  3-oxoacyl-[acyl-carrier-protein] reductase  33.88 
 
 
245 aa  124  2e-27  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0470155 
 
 
-
 
NC_008009  Acid345_4309  short-chain dehydrogenase/reductase SDR  32.7 
 
 
257 aa  124  2e-27  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.313012  normal 
 
 
-
 
NC_013132  Cpin_4842  short-chain dehydrogenase/reductase SDR  34.27 
 
 
249 aa  123  2e-27  Chitinophaga pinensis DSM 2588  Bacteria  hitchhiker  0.00384997  hitchhiker  0.000208801 
 
 
-
 
NC_009486  Tpet_0594  short-chain dehydrogenase/reductase SDR  32.81 
 
 
251 aa  124  2e-27  Thermotoga petrophila RKU-1  Bacteria  hitchhiker  0.000000426585  n/a   
 
 
-
 
NC_009505  BOV_1080  short chain dehydrogenase/reductase family oxidoreductase  33.06 
 
 
246 aa  124  2e-27  Brucella ovis ATCC 25840  Bacteria  normal  0.38691  n/a   
 
 
-
 
NC_009427  Saro_3657  short-chain dehydrogenase/reductase SDR  36.33 
 
 
290 aa  123  3e-27  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_007794  Saro_2429  short-chain dehydrogenase/reductase SDR  38.34 
 
 
246 aa  122  4e-27  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
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