More than 300 homologs were found in PanDaTox collection
for query gene Sare_2200 on replicon NC_009953
Organism: Salinispora arenicola CNS-205



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009953  Sare_2200  homocysteine S-methyltransferase  100 
 
 
307 aa  600  1.0000000000000001e-171  Salinispora arenicola CNS-205  Bacteria  normal  0.558388  normal  0.514236 
 
 
-
 
NC_011368  Rleg2_4534  homocysteine S-methyltransferase  33.56 
 
 
302 aa  119  4.9999999999999996e-26  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.0770365 
 
 
-
 
NC_011988  Avi_5017  S-methyltransferase  34 
 
 
301 aa  119  4.9999999999999996e-26  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_0692  homocysteine S-methyltransferase  35 
 
 
311 aa  118  9.999999999999999e-26  Pseudomonas putida F1  Bacteria  normal  normal  0.0245772 
 
 
-
 
NC_008709  Ping_2160  homocysteine S-methyltransferase  29.04 
 
 
310 aa  118  9.999999999999999e-26  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_008391  Bamb_4282  homocysteine S-methyltransferase  36.54 
 
 
309 aa  116  3.9999999999999997e-25  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_0658  homocysteine S-methyltransferase family protein  34.67 
 
 
311 aa  115  6e-25  Pseudomonas putida KT2440  Bacteria  normal  0.778946  normal 
 
 
-
 
NC_008789  Hhal_0392  homocysteine S-methyltransferase  38.26 
 
 
305 aa  115  1.0000000000000001e-24  Halorhodospira halophila SL1  Bacteria  normal  0.108543  n/a   
 
 
-
 
NC_012854  Rleg_6392  homocysteine S-methyltransferase  33.33 
 
 
302 aa  115  1.0000000000000001e-24  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.612657 
 
 
-
 
NC_010501  PputW619_5121  homocysteine S-methyltransferase  37.38 
 
 
299 aa  115  1.0000000000000001e-24  Pseudomonas putida W619  Bacteria  normal  0.0135376  normal  0.478948 
 
 
-
 
NC_008228  Patl_2815  homocysteine S-methyltransferase  29.35 
 
 
304 aa  111  1.0000000000000001e-23  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_3865  homocysteine S-methyltransferase  34.31 
 
 
300 aa  112  1.0000000000000001e-23  Shewanella putrefaciens CN-32  Bacteria  normal  0.0314464  n/a   
 
 
-
 
NC_002947  PP_2776  homocysteine S-methyltransferase family protein  33.23 
 
 
307 aa  110  3e-23  Pseudomonas putida KT2440  Bacteria  normal  0.420407  normal 
 
 
-
 
NC_011663  Sbal223_1277  homocysteine S-methyltransferase  34.63 
 
 
300 aa  110  3e-23  Shewanella baltica OS223  Bacteria  normal  normal  0.0441893 
 
 
-
 
NC_009997  Sbal195_3243  homocysteine S-methyltransferase  33.66 
 
 
300 aa  110  4.0000000000000004e-23  Shewanella baltica OS195  Bacteria  normal  0.562987  normal 
 
 
-
 
NC_004578  PSPTO_1135  homocysteine S-methyltransferase family protein  34.31 
 
 
298 aa  108  8.000000000000001e-23  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.300332  n/a   
 
 
-
 
NC_009654  Mmwyl1_2930  homocysteine S-methyltransferase  31.91 
 
 
303 aa  108  8.000000000000001e-23  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_1598  homocysteine S-methyltransferase  33.33 
 
 
297 aa  108  1e-22  Jannaschia sp. CCS1  Bacteria  normal  normal  0.296852 
 
 
-
 
NC_010718  Nther_0682  homocysteine S-methyltransferase  28.16 
 
 
793 aa  107  2e-22  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_009524  PsycPRwf_1497  homocysteine S-methyltransferase  30.67 
 
 
310 aa  107  3e-22  Psychrobacter sp. PRwf-1  Bacteria  normal  0.191799  normal  0.658864 
 
 
-
 
NC_007005  Psyr_0975  homocysteine S-methyltransferase  34.65 
 
 
310 aa  106  4e-22  Pseudomonas syringae pv. syringae B728a  Bacteria  decreased coverage  0.000866621  normal 
 
 
-
 
NC_007492  Pfl01_2779  homocysteine S-methyltransferase  33.33 
 
 
308 aa  106  5e-22  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_010512  Bcenmc03_6804  homocysteine S-methyltransferase  34.08 
 
 
313 aa  105  8e-22  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_0504  bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein  32.47 
 
 
605 aa  103  3e-21  Geobacter metallireducens GS-15  Bacteria  normal  0.0120544  normal 
 
 
-
 
NC_010552  BamMC406_4837  homocysteine S-methyltransferase  35.9 
 
 
309 aa  103  3e-21  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.345042 
 
 
-
 
NC_009665  Shew185_3100  homocysteine S-methyltransferase  34.2 
 
 
300 aa  103  3e-21  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_0613  bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein  35.12 
 
 
610 aa  103  4e-21  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_00664  homocysteine S-methyltransferase family protein  29.73 
 
 
305 aa  103  5e-21  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_3090  homocysteine S-methyltransferase  34.2 
 
 
300 aa  102  7e-21  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_0073  homocysteine S-methyltransferase  28.57 
 
 
290 aa  102  8e-21  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0627  bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein  34.78 
 
 
610 aa  100  3e-20  Geobacter sp. M21  Bacteria  n/a    unclonable  1.07944e-34 
 
 
-
 
NC_009012  Cthe_0645  methionine synthase (B12-dependent)  30.36 
 
 
804 aa  100  3e-20  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.474097  n/a   
 
 
-
 
NC_011899  Hore_19590  homocysteine S-methyltransferase  30.85 
 
 
819 aa  99.4  7e-20  Halothermothrix orenii H 168  Bacteria  normal  0.399567  n/a   
 
 
-
 
NC_002939  GSU2921  5-methyltetrahydrofolate-homocysteine methyltransferase, truncation  32.03 
 
 
804 aa  97.8  2e-19  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_0325  bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein  26.69 
 
 
605 aa  97.8  2e-19  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_004116  SAG1305  homocysteine methyltransferase  28.3 
 
 
314 aa  97.1  3e-19  Streptococcus agalactiae 2603V/R  Bacteria  normal  0.343801  n/a   
 
 
-
 
NC_009253  Dred_2207  homocysteine S-methyltransferase  30.36 
 
 
800 aa  97.1  4e-19  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0270016  n/a   
 
 
-
 
NC_010001  Cphy_3258  homocysteine S-methyltransferase  29.04 
 
 
841 aa  96.7  4e-19  Clostridium phytofermentans ISDg  Bacteria  normal  0.728955  n/a   
 
 
-
 
NC_010320  Teth514_1211  homocysteine S-methyltransferase  27.91 
 
 
807 aa  96.3  5e-19  Thermoanaerobacter sp. X514  Bacteria  normal  0.0179968  n/a   
 
 
-
 
NC_009784  VIBHAR_05821  homocysteine S-methyltransferase  27.76 
 
 
301 aa  96.3  6e-19  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_010003  Pmob_1792  homocysteine S-methyltransferase  25.57 
 
 
774 aa  95.9  7e-19  Petrotoga mobilis SJ95  Bacteria  normal  0.709712  n/a   
 
 
-
 
NC_009718  Fnod_0772  homocysteine S-methyltransferase  26.46 
 
 
780 aa  95.1  1e-18  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  0.0538889  n/a   
 
 
-
 
NC_013159  Svir_37350  homocysteine methyltransferase  34.44 
 
 
295 aa  95.5  1e-18  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.493269 
 
 
-
 
NC_002939  GSU2974  bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein  32.67 
 
 
605 aa  94.4  2e-18  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_1825  methionine synthase (B12-dependent)  31.43 
 
 
1158 aa  94  3e-18  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_1230  homocysteine S-methyltransferase  26.32 
 
 
311 aa  93.2  4e-18  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  0.829907  n/a   
 
 
-
 
NC_011685  PHATRDRAFT_48307  predicted protein  29.91 
 
 
346 aa  93.2  5e-18  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.532238  n/a   
 
 
-
 
NC_013216  Dtox_2941  homocysteine S-methyltransferase  30.48 
 
 
801 aa  92.8  6e-18  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.651468  normal 
 
 
-
 
NC_008346  Swol_1442  5-methyltetrahydrofolate-homocysteine methyltransferase, truncation  29.87 
 
 
839 aa  92.8  6e-18  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.955782  n/a   
 
 
-
 
NC_011769  DvMF_0476  homocysteine S-methyltransferase  37.17 
 
 
818 aa  92.4  8e-18  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.0411261 
 
 
-
 
NC_009565  TBFG_12156  5-methyltetrahydrofolate-homocystein methyltransferase metH  30.33 
 
 
1192 aa  91.7  2e-17  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.726643 
 
 
-
 
NC_009483  Gura_0708  bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein  32.16 
 
 
604 aa  90.9  3e-17  Geobacter uraniireducens Rf4  Bacteria  normal  0.537957  n/a   
 
 
-
 
NC_008312  Tery_2492  methionine synthase (B12-dependent)  28.31 
 
 
1224 aa  90.9  3e-17  Trichodesmium erythraeum IMS101  Bacteria  normal  0.494606  normal 
 
 
-
 
NC_013522  Taci_0141  homocysteine S-methyltransferase  33.89 
 
 
816 aa  90.5  3e-17  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  hitchhiker  0.0000403798  n/a   
 
 
-
 
NC_008609  Ppro_0283  bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein  34.23 
 
 
615 aa  90.9  3e-17  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_3081  homocysteine S-methyltransferase  24.68 
 
 
791 aa  90.1  4e-17  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_010180  BcerKBAB4_5466  homocysteine methyltransferase  28.06 
 
 
325 aa  90.1  4e-17  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0696243  hitchhiker  0.00895387 
 
 
-
 
NC_013525  Tter_1187  homocysteine S-methyltransferase  28.57 
 
 
629 aa  89.7  6e-17  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_002939  GSU1327  homocysteine S-methyltransferase domain-containing protein  31.65 
 
 
318 aa  89.4  7e-17  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0489  homocysteine S-methyltransferase  30.7 
 
 
804 aa  89.4  7e-17  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007513  Syncc9902_1123  5-methyltetrahydrofolate--homocysteine methyltransferase  29.51 
 
 
1208 aa  89.4  7e-17  Synechococcus sp. CC9902  Bacteria  decreased coverage  0.00712875  n/a   
 
 
-
 
NC_012912  Dd1591_3747  homocysteine S-methyltransferase  31.79 
 
 
302 aa  87.8  2e-16  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_1854  methionine synthase  29.8 
 
 
1154 aa  87.8  2e-16  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.516902 
 
 
-
 
NC_011898  Ccel_1861  homocysteine S-methyltransferase  27.7 
 
 
434 aa  88.2  2e-16  Clostridium cellulolyticum H10  Bacteria  decreased coverage  0.00000268518  n/a   
 
 
-
 
NC_008609  Ppro_1413  homocysteine S-methyltransferase  31.62 
 
 
806 aa  87.8  2e-16  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0607109  n/a   
 
 
-
 
NC_010085  Nmar_1268  homocysteine S-methyltransferase  26.1 
 
 
320 aa  87  3e-16  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal  0.897971 
 
 
-
 
NC_011831  Cagg_0866  homocysteine methyltransferase  33.44 
 
 
316 aa  87  4e-16  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.142005  normal  0.135969 
 
 
-
 
NC_014165  Tbis_1315  homocysteine S-methyltransferase  33.44 
 
 
288 aa  86.7  5e-16  Thermobispora bispora DSM 43833  Bacteria  normal  0.0420975  normal  0.31637 
 
 
-
 
NC_009457  VC0395_A2808  B12-dependent methionine synthase  28.65 
 
 
1226 aa  85.9  7e-16  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_3632  bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein  29.04 
 
 
617 aa  85.9  9e-16  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_0891  homocysteine S-methyltransferase  32.89 
 
 
303 aa  85.1  0.000000000000001  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.784239 
 
 
-
 
NC_012918  GM21_0262  homocysteine S-methyltransferase  30.2 
 
 
813 aa  84.7  0.000000000000002  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00180962 
 
 
-
 
NC_011146  Gbem_0277  homocysteine S-methyltransferase  31.14 
 
 
811 aa  84.7  0.000000000000002  Geobacter bemidjiensis Bem  Bacteria  normal  0.357222  n/a   
 
 
-
 
NC_007954  Sden_1115  B12-dependent methionine synthase  29.97 
 
 
1241 aa  83.2  0.000000000000005  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_5917  methionine synthase  29.19 
 
 
1154 aa  82.8  0.000000000000007  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0712476  normal  0.0446229 
 
 
-
 
NC_011312  VSAL_I0442  B12-dependent methionine synthase  29.2 
 
 
1226 aa  82.4  0.000000000000008  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_1146  homocysteine methyltransferase  30.56 
 
 
319 aa  82.4  0.000000000000008  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000617566 
 
 
-
 
NC_013205  Aaci_1583  bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein  31.29 
 
 
637 aa  82  0.00000000000001  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_4366  B12-dependent methionine synthase  32.2 
 
 
1247 aa  82  0.00000000000001  Methylobacterium sp. 4-46  Bacteria  normal  0.778137  normal 
 
 
-
 
NC_012034  Athe_0324  homocysteine S-methyltransferase  26 
 
 
413 aa  81.3  0.00000000000002  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_4499  methionine synthase  30.36 
 
 
1173 aa  81.6  0.00000000000002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.629663  hitchhiker  0.00843884 
 
 
-
 
NC_003909  BCE_4333  bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein  28.22 
 
 
610 aa  81.3  0.00000000000002  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS4157  bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein  28.22 
 
 
610 aa  81.3  0.00000000000002  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_3996  bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein  28.22 
 
 
610 aa  81.3  0.00000000000002  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK4006  bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein  28.22 
 
 
610 aa  81.3  0.00000000000002  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A4386  bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein  28.22 
 
 
610 aa  81.3  0.00000000000002  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A6259  methionine synthase (B12-dependent)  29.94 
 
 
372 aa  81.6  0.00000000000002  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_007530  GBAA_4479  bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein  28.22 
 
 
610 aa  81.3  0.00000000000002  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_4275  bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein  28.22 
 
 
610 aa  81.3  0.00000000000002  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_013421  Pecwa_3951  B12-dependent methionine synthase  29.05 
 
 
1227 aa  81.6  0.00000000000002  Pectobacterium wasabiae WPP163  Bacteria  normal  0.360627  n/a   
 
 
-
 
NC_010184  BcerKBAB4_4109  bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein  28.22 
 
 
610 aa  81.3  0.00000000000002  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_1101  B12-dependent methionine synthase  29.29 
 
 
1230 aa  80.5  0.00000000000003  Colwellia psychrerythraea 34H  Bacteria  normal  0.875071  n/a   
 
 
-
 
NC_010622  Bphy_0191  homocysteine S-methyltransferase  30.56 
 
 
356 aa  80.9  0.00000000000003  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_009080  BMA10247_3218  5-methyltetrahydrofolate--homocysteine methyltransferase  30.56 
 
 
359 aa  80.9  0.00000000000003  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_27020  methionine synthase (B12-dependent)  29.83 
 
 
1184 aa  80.5  0.00000000000003  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.12372  normal  0.910685 
 
 
-
 
NC_009074  BURPS668_0414  5-methyltetrahydrofolate--homocysteine methyltransferase  30.56 
 
 
359 aa  80.9  0.00000000000003  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_1858  homocysteine S-methyltransferase  32.77 
 
 
803 aa  80.5  0.00000000000003  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_1526  B12-dependent methionine synthase  29.62 
 
 
1232 aa  80.5  0.00000000000003  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_1548  homocysteine S-methyltransferase  35.25 
 
 
804 aa  80.9  0.00000000000003  Desulfovibrio vulgaris DP4  Bacteria  normal  0.0662443  normal 
 
 
-
 
NC_008785  BMASAVP1_A0249  5-methyltetrahydrofolate--homocysteine methyltransferase  30.56 
 
 
359 aa  80.9  0.00000000000003  Burkholderia mallei SAVP1  Bacteria  normal  0.481246  n/a   
 
 
-
 
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