18 homologs were found in PanDaTox collection
for query gene Sare_1947 on replicon NC_009953
Organism: Salinispora arenicola CNS-205



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009953  Sare_1947  XRE family transcriptional regulator  100 
 
 		 507 aa  1011    Salinispora arenicola CNS-205  Bacteria  normal  0.505699  normal  0.0597402 
 
 
-
 
NC_009953  Sare_1962  XRE family transcriptional regulator  55.81 
 
 		 410 aa  96.7  9e-19  Salinispora arenicola CNS-205  Bacteria  normal  1  normal  0.622079 
 
 
-
 
NC_009953  Sare_1959  XRE family transcriptional regulator  52.33 
 
 		 461 aa  94.7  4e-18  Salinispora arenicola CNS-205  Bacteria  normal  1  normal  0.24175 
 
 
-
 
NC_013595  Sros_3358  hypothetical protein  43.59 
 
 		 274 aa  70.1  0.00000000009  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0307286  normal  0.0952777 
 
 
-
 
NC_007333  Tfu_1244  helix-hairpin-helix DNA-binding motif-containing protein  39.74 
 
 		 515 aa  58.5  0.0000003  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_007333  Tfu_0731  helix-hairpin-helix DNA-binding motif-containing protein  45.16 
 
 		 418 aa  55.8  0.000002  Thermobifida fusca YX  Bacteria  decreased coverage  0.00340964  n/a   
 
 
-
 
NC_013595  Sros_2542  putative transcriptional regulator, XRE family  33.75 
 
 		 277 aa  53.9  0.000006  Streptosporangium roseum DSM 43021  Bacteria  normal  0.259314  normal  1 
 
 
-
 
NC_013947  Snas_2843  transcriptional regulator, XRE family  37.88 
 
 		 401 aa  52.4  0.00002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  0.397563 
 
 
-
 
NC_013131  Caci_0225  transcriptional regulator, XRE family  40.3 
 
 		 792 aa  50.4  0.00006  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.312331  normal  1 
 
 
-
 
NC_013131  Caci_0228  transcriptional regulator, XRE family  37.7 
 
 		 770 aa  48.9  0.0002  Catenulispora acidiphila DSM 44928  Bacteria  hitchhiker  0.00256597  normal  0.277855 
 
 
-
 
NC_014210  Ndas_1874  transcriptional regulator, XRE family  38.16 
 
 		 267 aa  48.9  0.0002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013093  Amir_0980  transcriptional regulator, XRE family  36.23 
 
 		 445 aa  48.1  0.0003  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_013510  Tcur_2729  transcriptional regulator, XRE family  39.34 
 
 		 431 aa  48.1  0.0004  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00000809201  n/a   
 
 
-
 
NC_014165  Tbis_3484  XRE family transcriptional regulator  38.36 
 
 		 439 aa  48.1  0.0004  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009380  Strop_4236  helix-turn-helix domain-containing protein  34.18 
 
 		 270 aa  47.4  0.0006  Salinispora tropica CNB-440  Bacteria  normal  1  normal  0.359637 
 
 
-
 
NC_013510  Tcur_3781  transcriptional regulator, XRE family  31.43 
 
 		 279 aa  46.2  0.001  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_011146  Gbem_3248  transcriptional regulator, XRE family  31.17 
 
 		 110 aa  45.1  0.003  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_007333  Tfu_0264  helix-hairpin-helix DNA-binding motif-containing protein  34.43 
 
 		 146 aa  44.7  0.004  Thermobifida fusca YX  Bacteria  normal  0.269806  n/a   
 
 
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