More than 300 homologs were found in PanDaTox collection
for query gene Sare_0070 on replicon NC_009953
Organism: Salinispora arenicola CNS-205



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009953  Sare_0070  cyclic nucleotide-binding protein  100 
 
 
227 aa  446  1.0000000000000001e-124  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.376283 
 
 
-
 
NC_013947  Snas_1232  transcriptional regulator, Crp/Fnr family  50.46 
 
 
235 aa  201  9.999999999999999e-51  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_5506  Crp/FNR family transcriptional regulator  43.95 
 
 
246 aa  167  2e-40  Frankia sp. EAN1pec  Bacteria  normal  0.324567  normal  0.438631 
 
 
-
 
NC_013131  Caci_7216  transcriptional regulator, Crp/Fnr family  42.53 
 
 
246 aa  161  8.000000000000001e-39  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.726682  normal 
 
 
-
 
NC_013093  Amir_5850  transcriptional regulator, Crp/Fnr family  41.44 
 
 
223 aa  157  2e-37  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0120826  n/a   
 
 
-
 
NC_013093  Amir_6844  transcriptional regulator, Crp/Fnr family  40.45 
 
 
235 aa  154  1e-36  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0901192  n/a   
 
 
-
 
NC_013947  Snas_4977  transcriptional regulator, Crp/Fnr family  40 
 
 
234 aa  151  8e-36  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.111601 
 
 
-
 
NC_013093  Amir_5511  transcriptional regulator, Crp/Fnr family  41.87 
 
 
227 aa  148  5e-35  Actinosynnema mirum DSM 43827  Bacteria  normal  0.360617  n/a   
 
 
-
 
NC_013595  Sros_6885  putative transcriptional regulator, Crp/Fnr family  41.26 
 
 
240 aa  138  7.999999999999999e-32  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1608  putative transcriptional regulator, Crp/Fnr family  39.65 
 
 
248 aa  132  6e-30  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_5851  transcriptional regulator, Crp/Fnr family  37.67 
 
 
242 aa  131  6.999999999999999e-30  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0930905  n/a   
 
 
-
 
NC_009921  Franean1_1677  cyclic nucleotide-binding protein  35.45 
 
 
258 aa  131  9e-30  Frankia sp. EAN1pec  Bacteria  normal  0.506462  normal  0.511537 
 
 
-
 
NC_013739  Cwoe_0602  transcriptional regulator, Crp/Fnr family  36.24 
 
 
225 aa  114  7.999999999999999e-25  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.628877 
 
 
-
 
NC_013510  Tcur_1167  transcriptional regulator, Crp/Fnr family  34.36 
 
 
231 aa  114  8.999999999999998e-25  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0781257  n/a   
 
 
-
 
NC_013510  Tcur_1118  transcriptional regulator, Crp/Fnr family  33.76 
 
 
240 aa  109  3e-23  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_1814  transcriptional regulator, Crp/Fnr family  28.5 
 
 
225 aa  105  7e-22  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_5783  transcriptional regulator, Crp/Fnr family  36.54 
 
 
212 aa  105  7e-22  Actinosynnema mirum DSM 43827  Bacteria  hitchhiker  0.00268451  n/a   
 
 
-
 
NC_013169  Ksed_25400  cAMP-binding protein  31.71 
 
 
225 aa  100  3e-20  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_8981  putative transcriptional regulator, Crp/Fnr family  34.24 
 
 
222 aa  98.6  6e-20  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_3038  transcriptional regulator, Crp/Fnr family  30.36 
 
 
225 aa  94.7  1e-18  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_1644  Crp/FNR family transcriptional regulator  33.86 
 
 
223 aa  90.1  2e-17  Salinispora arenicola CNS-205  Bacteria  normal  normal 
 
 
-
 
NC_013721  HMPREF0424_0303  cyclic nucleotide-binding domain protein  26.61 
 
 
236 aa  90.1  3e-17  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.232206 
 
 
-
 
NC_008578  Acel_1995  transcriptional regulator  31.63 
 
 
224 aa  90.1  3e-17  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_4850  transcriptional regulator, Crp/Fnr family  29.25 
 
 
228 aa  89.4  5e-17  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_26230  cAMP-binding protein  29.44 
 
 
225 aa  89  6e-17  Brachybacterium faecium DSM 4810  Bacteria  normal  0.466611  n/a   
 
 
-
 
NC_008699  Noca_0339  cyclic nucleotide-binding  32.98 
 
 
225 aa  88.2  9e-17  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_0698  CRP/FNR family transcriptional regulator  25.12 
 
 
227 aa  87  2e-16  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_0517  transcriptional regulator, Crp/Fnr family  30.69 
 
 
224 aa  86.3  3e-16  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_1659  cyclic nucleotide-binding  33.33 
 
 
223 aa  85.9  4e-16  Salinispora tropica CNB-440  Bacteria  normal  0.834954  normal 
 
 
-
 
NC_008541  Arth_3395  Crp/FNR family transcriptional regulator  29.61 
 
 
225 aa  85.9  5e-16  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_010816  BLD_0979  cAMP-binding protein  28.72 
 
 
239 aa  84.3  0.000000000000001  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_0468  putative transcriptional regulator, Crp/Fnr family  32.5 
 
 
226 aa  84.3  0.000000000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.974187 
 
 
-
 
NC_013947  Snas_1066  transcriptional regulator, Crp/Fnr family  32.74 
 
 
225 aa  84.3  0.000000000000002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_3176  transcriptional regulator, Crp/Fnr family  28.65 
 
 
225 aa  84  0.000000000000002  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.231761 
 
 
-
 
NC_014151  Cfla_3095  transcriptional regulator, Crp/Fnr family  31.19 
 
 
220 aa  84  0.000000000000002  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.0000148221 
 
 
-
 
NC_014165  Tbis_0204  Crp/Fnr family transcriptional regulator  28.92 
 
 
226 aa  82.8  0.000000000000004  Thermobispora bispora DSM 43833  Bacteria  normal  0.0718939  normal 
 
 
-
 
NC_008262  CPR_0754  Crp/FNR family transcriptional regulator  26.6 
 
 
236 aa  80.9  0.00000000000001  Clostridium perfringens SM101  Bacteria  decreased coverage  0.0000212493  n/a   
 
 
-
 
NC_014211  Ndas_5315  transcriptional regulator, Crp/Fnr family  29.1 
 
 
228 aa  81.6  0.00000000000001  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.527594 
 
 
-
 
NC_007333  Tfu_0117  cyclic nucleotide-binding: regulatory protein, Crp  29.1 
 
 
228 aa  80.1  0.00000000000002  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_0824  Crp/FNR family transcriptional regulator  27.27 
 
 
225 aa  80.5  0.00000000000002  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0928817  normal  0.0486748 
 
 
-
 
NC_008261  CPF_0778  Crp/FNR family transcriptional regulator  26.6 
 
 
236 aa  80.9  0.00000000000002  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  0.000312841  n/a   
 
 
-
 
NC_013174  Jden_0435  transcriptional regulator, Crp/Fnr family  27.98 
 
 
226 aa  80.5  0.00000000000002  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.376669 
 
 
-
 
NC_012803  Mlut_18280  cAMP-binding protein  29.19 
 
 
225 aa  79.3  0.00000000000004  Micrococcus luteus NCTC 2665  Bacteria  normal  0.186071  n/a   
 
 
-
 
NC_008009  Acid345_3455  Crp/FNR family transcriptional regulator  26 
 
 
237 aa  78.6  0.00000000000007  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.063385 
 
 
-
 
NC_013739  Cwoe_5808  transcriptional regulator, Crp/Fnr family  30.95 
 
 
231 aa  77.4  0.0000000000002  Conexibacter woesei DSM 14684  Bacteria  normal  0.254135  normal  0.0101482 
 
 
-
 
NC_013411  GYMC61_1592  transcriptional regulator, Crp/Fnr family  26.94 
 
 
228 aa  77.4  0.0000000000002  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010424  Daud_2039  CRP/FNR family transcriptional regulator  26.06 
 
 
226 aa  77  0.0000000000002  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_0559  Crp/FNR family transcriptional regulator  26.19 
 
 
225 aa  77  0.0000000000002  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.338488  normal  0.42035 
 
 
-
 
NC_013061  Phep_2492  response regulator receiver  25 
 
 
352 aa  77.4  0.0000000000002  Pedobacter heparinus DSM 2366  Bacteria  normal  0.570528  normal  0.0101485 
 
 
-
 
NC_008261  CPF_0781  Crp/FNR family transcriptional regulator  24.32 
 
 
236 aa  76.6  0.0000000000003  Clostridium perfringens ATCC 13124  Bacteria  normal  0.0113537  n/a   
 
 
-
 
NC_008554  Sfum_2941  Crp/FNR family transcriptional regulator  25.93 
 
 
235 aa  75.9  0.0000000000004  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_008262  CPR_0757  Crp/FNR family transcriptional regulator  24.32 
 
 
236 aa  75.9  0.0000000000005  Clostridium perfringens SM101  Bacteria  normal  0.0100726  n/a   
 
 
-
 
NC_013216  Dtox_1633  transcriptional regulator, Crp/Fnr family  24.16 
 
 
226 aa  75.5  0.0000000000006  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.391452  normal  0.0281193 
 
 
-
 
NC_013521  Sked_04890  cAMP-binding protein  28.7 
 
 
226 aa  75.5  0.0000000000006  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.84759 
 
 
-
 
NC_007413  Ava_3066  Crp/FNR family transcriptional regulator  26.36 
 
 
232 aa  75.1  0.0000000000007  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_0893  Crp/FNR family transcriptional regulator  25 
 
 
226 aa  75.5  0.0000000000007  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007406  Nwi_3032  Crp family transcriptional regulator  25.6 
 
 
224 aa  74.7  0.000000000001  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.0461942  normal 
 
 
-
 
NC_012918  GM21_2448  transcriptional regulator, Crp/Fnr family  24.46 
 
 
238 aa  73.9  0.000000000002  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_010505  Mrad2831_0324  Crp/FNR family transcriptional regulator  27.67 
 
 
226 aa  74.3  0.000000000002  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.105795  normal 
 
 
-
 
NC_013510  Tcur_2257  transcriptional regulator, Crp/Fnr family  30.96 
 
 
234 aa  73.2  0.000000000003  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00000784359  n/a   
 
 
-
 
NC_013441  Gbro_0505  cyclic nucleotide-binding protein  29.15 
 
 
224 aa  73.2  0.000000000003  Gordonia bronchialis DSM 43247  Bacteria  normal  0.287437  n/a   
 
 
-
 
NC_007777  Francci3_4286  Crp/FNR family transcriptional regulator  32.64 
 
 
241 aa  73.2  0.000000000003  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_18160  putative transcriptional regulator, Crp/Fnr family  23.81 
 
 
219 aa  73.2  0.000000000003  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.000000607267  n/a   
 
 
-
 
NC_007958  RPD_1005  cyclic nucleotide-binding  24.39 
 
 
226 aa  73.6  0.000000000003  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.184599  normal  0.14907 
 
 
-
 
NC_014158  Tpau_3932  transcriptional regulator, Crp/Fnr family  29.79 
 
 
224 aa  73.6  0.000000000003  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.571672  n/a   
 
 
-
 
NC_012669  Bcav_0608  transcriptional regulator, Crp/Fnr family  30.32 
 
 
225 aa  72.8  0.000000000004  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.847542  normal 
 
 
-
 
NC_014248  Aazo_3421  Crp/Fnr family transcriptional regulator  27.93 
 
 
232 aa  72.8  0.000000000004  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_0253  transcriptional regulator, Crp/Fnr family  29.6 
 
 
224 aa  72.4  0.000000000005  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1853  transcriptional regulator, Crp/Fnr family  21.52 
 
 
240 aa  72  0.000000000007  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_4102  transcriptional regulator, Crp/Fnr family  28.95 
 
 
251 aa  72  0.000000000007  Haliangium ochraceum DSM 14365  Bacteria  normal  0.363021  normal  0.0126572 
 
 
-
 
NC_009674  Bcer98_3398  CRP/FNR family transcriptional regulator  23.2 
 
 
230 aa  72  0.000000000008  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_0424  putative transcriptional regulator, Crp/Fnr family  28.88 
 
 
242 aa  72  0.000000000008  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.24952 
 
 
-
 
NC_009012  Cthe_2775  Crp/FNR family transcriptional regulator  22.65 
 
 
232 aa  72  0.000000000008  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.9012  n/a   
 
 
-
 
NC_011662  Tmz1t_1763  transcriptional regulator, Crp/Fnr family  27.43 
 
 
223 aa  71.6  0.000000000009  Thauera sp. MZ1T  Bacteria  normal  0.796832  n/a   
 
 
-
 
NC_009511  Swit_2706  Crp/FNR family transcriptional regulator  23.96 
 
 
228 aa  71.6  0.000000000009  Sphingomonas wittichii RW1  Bacteria  normal  0.154877  normal 
 
 
-
 
NC_011146  Gbem_1802  transcriptional regulator, Crp/Fnr family  23.91 
 
 
238 aa  71.2  0.00000000001  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_0049  Crp/FNR family transcriptional regulator  33.1 
 
 
252 aa  71.2  0.00000000001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.422683  n/a   
 
 
-
 
NC_013159  Svir_36130  cAMP-binding protein  30.04 
 
 
224 aa  71.2  0.00000000001  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.758224 
 
 
-
 
NC_008048  Sala_1169  Crp/FNR family transcriptional regulator  27.62 
 
 
227 aa  71.2  0.00000000001  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.0303416  normal  0.0506186 
 
 
-
 
NC_013132  Cpin_0678  transcriptional regulator, Crp/Fnr family  22.58 
 
 
236 aa  71.2  0.00000000001  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0236133  normal 
 
 
-
 
NC_007484  Noc_1061  Crp family transcriptional regulator  23.94 
 
 
214 aa  70.5  0.00000000002  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.0336611  n/a   
 
 
-
 
NC_008009  Acid345_1498  Crp/FNR family transcriptional regulator  24.14 
 
 
239 aa  70.5  0.00000000002  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.163113  normal 
 
 
-
 
NC_009921  Franean1_0328  Crp/FNR family transcriptional regulator  32.64 
 
 
246 aa  70.1  0.00000000002  Frankia sp. EAN1pec  Bacteria  normal  0.0277272  normal  0.0570772 
 
 
-
 
NC_010184  BcerKBAB4_1975  Crp/FNR family transcriptional regulator  22.04 
 
 
230 aa  70.5  0.00000000002  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_05940  putative transcriptional regulator, Crp/Fnr family  22.89 
 
 
231 aa  70.1  0.00000000003  Halothermothrix orenii H 168  Bacteria  normal  0.558941  n/a   
 
 
-
 
NC_008146  Mmcs_4818  Crp/FNR family transcriptional regulator  27.8 
 
 
224 aa  68.9  0.00000000005  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_8903  transcriptional regulator, Crp/Fnr family  35.92 
 
 
224 aa  68.9  0.00000000005  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_4762  Crp/FNR family transcriptional regulator  32.45 
 
 
225 aa  69.3  0.00000000005  Salinispora arenicola CNS-205  Bacteria  normal  0.900483  hitchhiker  0.0000929699 
 
 
-
 
NC_008705  Mkms_4904  Crp/FNR family transcriptional regulator  27.8 
 
 
224 aa  68.9  0.00000000005  Mycobacterium sp. KMS  Bacteria  normal  normal  0.385516 
 
 
-
 
NC_009077  Mjls_5205  Crp/FNR family transcriptional regulator  27.8 
 
 
224 aa  68.9  0.00000000005  Mycobacterium sp. JLS  Bacteria  normal  0.703662  hitchhiker  0.000819508 
 
 
-
 
NC_011899  Hore_09760  putative transcriptional regulator, Crp/Fnr family  20.54 
 
 
226 aa  68.9  0.00000000006  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_4322  cyclic nucleotide-binding  31.91 
 
 
225 aa  68.6  0.00000000007  Salinispora tropica CNB-440  Bacteria  normal  normal  0.0230513 
 
 
-
 
NC_008148  Rxyl_2076  Crp/FNR family transcriptional regulator  26.52 
 
 
234 aa  68.6  0.00000000007  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.398696  n/a   
 
 
-
 
NC_010320  Teth514_1376  CRP/FNR family transcriptional regulator  22.22 
 
 
228 aa  68.2  0.00000000009  Thermoanaerobacter sp. X514  Bacteria  normal  0.271211  n/a   
 
 
-
 
NC_008312  Tery_1557  Crp/FNR family transcriptional regulator  26.47 
 
 
234 aa  68.2  0.00000000009  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.986178 
 
 
-
 
NC_013739  Cwoe_2918  transcriptional regulator, Crp/Fnr family  30.1 
 
 
226 aa  68.2  0.0000000001  Conexibacter woesei DSM 14684  Bacteria  normal  0.172063  normal  0.392966 
 
 
-
 
NC_009511  Swit_3029  CRP/FNR family transcriptional regulator  26.13 
 
 
228 aa  68.2  0.0000000001  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_0723  Crp/FNR family transcriptional regulator  27.65 
 
 
228 aa  67.8  0.0000000001  Methylobacterium sp. 4-46  Bacteria  normal  0.362046  normal  0.190371 
 
 
-
 
NC_008726  Mvan_5435  CRP/FNR family transcriptional regulator  27.8 
 
 
224 aa  68.2  0.0000000001  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.397858 
 
 
-
 
NC_004311  BRA0262  Crp/FNR family transcriptional regulator  25 
 
 
231 aa  67.4  0.0000000002  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
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