More than 300 homologs were found in PanDaTox collection
for query gene Sama_2502 on replicon NC_008700
Organism: Shewanella amazonensis SB2B



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008700  Sama_2502  putative methyl-accepting chemotaxis sensory transducer  100 
 
 
649 aa  1297    Shewanella amazonensis SB2B  Bacteria  normal  0.988754  normal 
 
 
-
 
NC_009831  Ssed_1012  hypothetical protein  46.02 
 
 
626 aa  278  3e-73  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_3308  methyl-accepting chemotaxis sensory transducer  30.41 
 
 
682 aa  251  3e-65  Magnetococcus sp. MC-1  Bacteria  normal  0.785168  normal 
 
 
-
 
NC_004347  SO_2323  methyl-accepting chemotaxis protein  29.2 
 
 
646 aa  239  1e-61  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008322  Shewmr7_3858  methyl-accepting chemotaxis sensory transducer  31.32 
 
 
653 aa  229  1e-58  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_1334  methyl-accepting chemotaxis protein  37.53 
 
 
550 aa  228  3e-58  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_0157  methyl-accepting chemotaxis sensory transducer  40.36 
 
 
646 aa  226  1e-57  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.805637  n/a   
 
 
-
 
NC_010506  Swoo_0808  methyl-accepting chemotaxis sensory transducer  37.38 
 
 
541 aa  225  2e-57  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_1150  chemotaxis sensory transducer  35.13 
 
 
551 aa  224  3e-57  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_0861  methyl-accepting chemotaxis sensory transducer  35.49 
 
 
542 aa  218  2.9999999999999998e-55  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_3705  methyl-accepting chemotaxis sensory transducer  34.97 
 
 
541 aa  218  2.9999999999999998e-55  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0963791  normal 
 
 
-
 
NC_009654  Mmwyl1_2301  methyl-accepting chemotaxis sensory transducer  37.94 
 
 
632 aa  218  2.9999999999999998e-55  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_4441  methyl-accepting chemotaxis sensory transducer  31.64 
 
 
654 aa  218  2.9999999999999998e-55  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_0905  histidine kinase, HAMP region: chemotaxis sensory transducer  29.24 
 
 
640 aa  217  5.9999999999999996e-55  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.746842  normal 
 
 
-
 
NC_011901  Tgr7_0851  methyl-accepting chemotaxis sensory transducer  37.94 
 
 
674 aa  215  1.9999999999999998e-54  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.244273  n/a   
 
 
-
 
NC_008321  Shewmr4_3785  methyl-accepting chemotaxis sensory transducer  30.27 
 
 
653 aa  215  1.9999999999999998e-54  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_0160  methyl-accepting chemotaxis sensory transducer  31.28 
 
 
653 aa  214  4.9999999999999996e-54  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_67010  putative chemotaxis transducer  45.17 
 
 
647 aa  213  1e-53  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_3985  methyl-accepting chemotaxis sensory transducer  30.71 
 
 
653 aa  213  1e-53  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_2634  histidine kinase, HAMP region: chemotaxis sensory transducer  40.4 
 
 
542 aa  213  1e-53  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.917034  normal 
 
 
-
 
NC_010322  PputGB1_5070  methyl-accepting chemotaxis sensory transducer  33.05 
 
 
638 aa  211  3e-53  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_004349  SO_A0106  methyl-accepting chemotaxis protein  37.23 
 
 
546 aa  211  4e-53  Shewanella oneidensis MR-1  Bacteria  normal  0.827543  n/a   
 
 
-
 
NC_011138  MADE_01731  Methyl-accepting chemotaxis protein  38.94 
 
 
539 aa  210  5e-53  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_1701  methyl-accepting chemotaxis sensory transducer  38.33 
 
 
650 aa  210  5e-53  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.076135 
 
 
-
 
NC_009654  Mmwyl1_0341  methyl-accepting chemotaxis sensory transducer  35.97 
 
 
544 aa  209  9e-53  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_0219  methyl-accepting chemotaxis sensory transducer  38.61 
 
 
773 aa  209  1e-52  Marinomonas sp. MWYL1  Bacteria  normal  0.952357  normal 
 
 
-
 
NC_009654  Mmwyl1_0161  methyl-accepting chemotaxis sensory transducer  27.04 
 
 
661 aa  209  1e-52  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.0270172 
 
 
-
 
NC_007954  Sden_0712  chemotaxis sensory transducer  38.6 
 
 
541 aa  209  1e-52  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.0000566108  n/a   
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  38.64 
 
 
713 aa  209  2e-52  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_004578  PSPTO_3580  methyl-accepting chemotaxis protein  38.5 
 
 
546 aa  208  3e-52  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_0931  methyl-accepting chemotaxis sensory transducer  32.45 
 
 
541 aa  208  3e-52  Shewanella baltica OS195  Bacteria  normal  normal  0.476721 
 
 
-
 
NC_009901  Spea_4196  methyl-accepting chemotaxis sensory transducer  44.95 
 
 
552 aa  207  4e-52  Shewanella pealeana ATCC 700345  Bacteria  normal  0.14959  n/a   
 
 
-
 
NC_007520  Tcr_1999  methyl-accepting chemotaxis sensory transducer  41.61 
 
 
405 aa  207  5e-52  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_1102  methyl-accepting chemotaxis protein  38.14 
 
 
638 aa  207  5e-52  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_0921  methyl-accepting chemotaxis sensory transducer  35.91 
 
 
541 aa  207  6e-52  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  37.11 
 
 
541 aa  207  6e-52  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_008345  Sfri_0080  methyl-accepting chemotaxis sensory transducer  39.66 
 
 
636 aa  207  6e-52  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_4218  histidine kinase, HAMP region: chemotaxis sensory transducer  37.6 
 
 
541 aa  206  7e-52  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.599163 
 
 
-
 
NC_004578  PSPTO_4541  methyl-accepting chemotaxis protein  38.55 
 
 
541 aa  206  8e-52  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.726322  n/a   
 
 
-
 
NC_007005  Psyr_3351  histidine kinase, HAMP region: chemotaxis sensory transducer  39.54 
 
 
570 aa  206  8e-52  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0540062  normal  0.0241334 
 
 
-
 
NC_009052  Sbal_1494  methyl-accepting chemotaxis sensory transducer  36.97 
 
 
548 aa  206  9e-52  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_2616  methyl-accepting chemotaxis protein  38.87 
 
 
633 aa  206  9e-52  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  decreased coverage  0.00438795  n/a   
 
 
-
 
NC_007005  Psyr_2356  histidine kinase, HAMP region: chemotaxis sensory transducer  37.5 
 
 
619 aa  206  1e-51  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0809243  normal  0.398562 
 
 
-
 
NC_011901  Tgr7_0712  putative methyl-accepting chemotaxis sensory transducer  42.36 
 
 
624 aa  206  1e-51  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_3809  methyl-accepting chemotaxis sensory transducer  34.96 
 
 
547 aa  205  2e-51  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_3441  methyl-accepting chemotaxis sensory transducer  35.66 
 
 
541 aa  204  3e-51  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_0529  methyl-accepting chemotaxis protein-like protein  35.48 
 
 
677 aa  204  4e-51  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_0897  methyl-accepting chemotaxis sensory transducer  35.66 
 
 
541 aa  204  4e-51  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  38.81 
 
 
716 aa  204  4e-51  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_004578  PSPTO_1059  methyl-accepting chemotaxis protein  28.29 
 
 
629 aa  204  5e-51  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_0447  chemotaxis sensory transducer  34.66 
 
 
541 aa  204  5e-51  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_4404  methyl-accepting chemotaxis sensory transducer  38.2 
 
 
638 aa  204  6e-51  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.0156105 
 
 
-
 
NC_004578  PSPTO_3098  methyl-accepting chemotaxis protein  29.25 
 
 
642 aa  203  8e-51  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.398555  n/a   
 
 
-
 
NC_007005  Psyr_1491  histidine kinase, HAMP region: chemotaxis sensory transducer  39.76 
 
 
539 aa  203  8e-51  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_013457  VEA_001273  methyl-accepting chemotaxis protein  38.66 
 
 
638 aa  202  9.999999999999999e-51  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_2471  methyl-accepting chemotaxis sensory transducer  38.14 
 
 
425 aa  202  9.999999999999999e-51  Pseudomonas mendocina ymp  Bacteria  normal  0.817651  normal 
 
 
-
 
NC_009092  Shew_0876  methyl-accepting chemotaxis sensory transducer  34.41 
 
 
674 aa  202  9.999999999999999e-51  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_4894  methyl-accepting chemotaxis sensory transducer  41.36 
 
 
638 aa  202  9.999999999999999e-51  Pseudomonas putida F1  Bacteria  normal  0.291281  normal 
 
 
-
 
NC_007005  Psyr_3114  histidine kinase, HAMP region: chemotaxis sensory transducer  36.72 
 
 
541 aa  202  9.999999999999999e-51  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.860602  normal 
 
 
-
 
NC_010506  Swoo_4795  methyl-accepting chemotaxis sensory transducer  38.48 
 
 
638 aa  202  9.999999999999999e-51  Shewanella woodyi ATCC 51908  Bacteria  normal  0.884167  hitchhiker  0.000462611 
 
 
-
 
NC_009438  Sputcn32_1426  methyl-accepting chemotaxis sensory transducer  37.32 
 
 
634 aa  202  1.9999999999999998e-50  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_5020  methyl-accepting chemotaxis sensory transducer  40.36 
 
 
638 aa  202  1.9999999999999998e-50  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_4624  methyl-accepting chemotaxis protein  39.76 
 
 
539 aa  202  1.9999999999999998e-50  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.140064  n/a   
 
 
-
 
NC_009831  Ssed_4463  methyl-accepting chemotaxis sensory transducer  45.3 
 
 
552 aa  202  1.9999999999999998e-50  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.43301 
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  37.2 
 
 
712 aa  202  1.9999999999999998e-50  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  41.64 
 
 
637 aa  202  1.9999999999999998e-50  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_007954  Sden_0099  chemotaxis sensory transducer  38.76 
 
 
639 aa  202  1.9999999999999998e-50  Shewanella denitrificans OS217  Bacteria  unclonable  0.0000000152719  n/a   
 
 
-
 
NC_009092  Shew_0085  methyl-accepting chemotaxis sensory transducer  37.64 
 
 
638 aa  201  3e-50  Shewanella loihica PV-4  Bacteria  normal  0.0647334  normal 
 
 
-
 
NC_009654  Mmwyl1_3948  methyl-accepting chemotaxis sensory transducer  32.76 
 
 
658 aa  201  3.9999999999999996e-50  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_5811  putative chemotaxis transducer  44.83 
 
 
647 aa  201  3.9999999999999996e-50  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_3139  methyl-accepting chemotaxis sensory transducer  35.94 
 
 
640 aa  201  5e-50  Pseudomonas mendocina ymp  Bacteria  normal  0.753261  normal  0.0120166 
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  36.77 
 
 
712 aa  200  7e-50  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_011901  Tgr7_2492  methyl-accepting chemotaxis sensory transducer  44.95 
 
 
572 aa  200  9e-50  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_3279  methyl-accepting chemotaxis protein  37.1 
 
 
541 aa  199  1.0000000000000001e-49  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.149652  n/a   
 
 
-
 
NC_010322  PputGB1_5071  methyl-accepting chemotaxis sensory transducer  36.67 
 
 
647 aa  199  1.0000000000000001e-49  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_0030  putative methyl-accepting chemotaxis sensory transducer  35.98 
 
 
660 aa  199  1.0000000000000001e-49  Shewanella amazonensis SB2B  Bacteria  normal  0.136855  normal  0.0162002 
 
 
-
 
NC_009512  Pput_4895  methyl-accepting chemotaxis sensory transducer  29.93 
 
 
739 aa  198  2.0000000000000003e-49  Pseudomonas putida F1  Bacteria  normal  0.247309  normal 
 
 
-
 
NC_007005  Psyr_0868  histidine kinase, HAMP region: chemotaxis sensory transducer  36.53 
 
 
546 aa  198  2.0000000000000003e-49  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.872643 
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  36.71 
 
 
638 aa  199  2.0000000000000003e-49  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_009438  Sputcn32_1438  methyl-accepting chemotaxis sensory transducer  35.44 
 
 
540 aa  198  2.0000000000000003e-49  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_0466  methyl-accepting chemotaxis protein  37.26 
 
 
541 aa  198  3e-49  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_05150  adenylyl cyclase class-3/4/guanylyl cyclase  38.29 
 
 
650 aa  197  4.0000000000000005e-49  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011901  Tgr7_1324  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  41.09 
 
 
523 aa  197  4.0000000000000005e-49  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.587106  n/a   
 
 
-
 
NC_007492  Pfl01_2907  chemotaxis sensory transducer  36.32 
 
 
541 aa  197  5.000000000000001e-49  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.300582 
 
 
-
 
NC_008789  Hhal_0443  methyl-accepting chemotaxis sensory transducer  36.87 
 
 
541 aa  197  5.000000000000001e-49  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_5021  methyl-accepting chemotaxis sensory transducer  29.46 
 
 
647 aa  197  6e-49  Pseudomonas putida KT2440  Bacteria  normal  0.0828859  normal 
 
 
-
 
NC_009438  Sputcn32_0513  methyl-accepting chemotaxis sensory transducer  35.29 
 
 
542 aa  197  6e-49  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_3284  methyl-accepting chemotaxis sensory transducer  37.15 
 
 
522 aa  197  7e-49  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2966  histidine kinase, HAMP region: chemotaxis sensory transducer  36.16 
 
 
642 aa  196  8.000000000000001e-49  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.249585  normal  0.113943 
 
 
-
 
NC_007954  Sden_2891  chemotaxis sensory transducer  36.31 
 
 
673 aa  196  8.000000000000001e-49  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1672  methyl-accepting chemotaxis sensory transducer  37.1 
 
 
544 aa  196  9e-49  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_2650  methyl-accepting chemotaxis sensory transducer  42.46 
 
 
568 aa  196  9e-49  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_0317  methyl-accepting chemotaxis sensory transducer  37.96 
 
 
541 aa  196  1e-48  Pseudomonas putida KT2440  Bacteria  normal  0.365849  decreased coverage  0.0000342214 
 
 
-
 
NC_007005  Psyr_3348  histidine kinase, HAMP region: chemotaxis sensory transducer  37.11 
 
 
542 aa  196  1e-48  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.946905  normal  0.024921 
 
 
-
 
NC_008463  PA14_43220  putative methyl-accepting chemotaxis transducer  39.83 
 
 
652 aa  195  2e-48  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.625872 
 
 
-
 
NC_004578  PSPTO_5569  methyl-accepting chemotaxis protein  36.87 
 
 
541 aa  195  2e-48  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_3322  methyl-accepting chemotaxis sensory transducer  32.89 
 
 
539 aa  195  2e-48  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.910778 
 
 
-
 
NC_011901  Tgr7_1674  methyl-accepting chemotaxis sensory transducer  40.23 
 
 
543 aa  195  2e-48  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_3323  methyl-accepting chemotaxis sensory transducer  40 
 
 
539 aa  195  3e-48  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_2398  methyl-accepting chemotaxis sensory transducer  31.82 
 
 
656 aa  195  3e-48  Shewanella pealeana ATCC 700345  Bacteria  normal  0.201842  n/a   
 
 
-
 
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