More than 300 homologs were found in PanDaTox collection
for query gene Sama_1713 on replicon NC_008700
Organism: Shewanella amazonensis SB2B



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010506  Swoo_2282  methyl-accepting chemotaxis sensory transducer  54.27 
 
 
664 aa  671    Shewanella woodyi ATCC 51908  Bacteria  normal  0.330304  normal 
 
 
-
 
NC_009665  Shew185_1950  methyl-accepting chemotaxis sensory transducer  56.33 
 
 
664 aa  693    Shewanella baltica OS185  Bacteria  normal  0.0377955  n/a   
 
 
-
 
NC_008700  Sama_1713  putative methyl-accepting chemotaxis sensory transducer  100 
 
 
666 aa  1352    Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.000425798  normal  0.0665929 
 
 
-
 
NC_009831  Ssed_2325  methyl-accepting chemotaxis sensory transducer  55.27 
 
 
664 aa  703    Shewanella sediminis HAW-EB3  Bacteria  normal  0.100516  hitchhiker  0.00420774 
 
 
-
 
NC_009901  Spea_2242  methyl-accepting chemotaxis sensory transducer  52.71 
 
 
664 aa  654    Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_1685  methyl-accepting chemotaxis sensory transducer  56.02 
 
 
664 aa  704    Shewanella sp. MR-4  Bacteria  normal  0.0832618  normal  0.158688 
 
 
-
 
NC_009997  Sbal195_1957  methyl-accepting chemotaxis sensory transducer  56.02 
 
 
664 aa  689    Shewanella baltica OS195  Bacteria  normal  0.257458  normal  0.211978 
 
 
-
 
NC_008322  Shewmr7_1760  methyl-accepting chemotaxis sensory transducer  56.17 
 
 
664 aa  707    Shewanella sp. MR-7  Bacteria  normal  0.106787  normal  0.536367 
 
 
-
 
NC_009092  Shew_1929  methyl-accepting chemotaxis sensory transducer  55.27 
 
 
662 aa  688    Shewanella loihica PV-4  Bacteria  normal  0.23754  normal  0.0188929 
 
 
-
 
NC_009438  Sputcn32_1813  methyl-accepting chemotaxis sensory transducer  56.48 
 
 
664 aa  715    Shewanella putrefaciens CN-32  Bacteria  normal  0.280908  n/a   
 
 
-
 
NC_008345  Sfri_1352  methyl-accepting chemotaxis sensory transducer  51.96 
 
 
668 aa  664    Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_1790  methyl-accepting chemotaxis sensory transducer  56.33 
 
 
664 aa  701    Shewanella sp. ANA-3  Bacteria  normal  0.119789  normal  0.182995 
 
 
-
 
NC_011663  Sbal223_2369  methyl-accepting chemotaxis sensory transducer  56.17 
 
 
664 aa  692    Shewanella baltica OS223  Bacteria  normal  0.0315396  normal  0.0961625 
 
 
-
 
NC_009052  Sbal_1924  methyl-accepting chemotaxis sensory transducer  57.63 
 
 
531 aa  578  1e-164  Shewanella baltica OS155  Bacteria  normal  0.666083  n/a   
 
 
-
 
NC_003910  CPS_1937  methyl-accepting chemotaxis protein  36.63 
 
 
662 aa  343  8e-93  Colwellia psychrerythraea 34H  Bacteria  normal  0.0215017  n/a   
 
 
-
 
NC_003910  CPS_0763  methyl-accepting chemotaxis protein  36.44 
 
 
661 aa  319  1e-85  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_2511  methyl-accepting chemotaxis protein  34.67 
 
 
653 aa  286  8e-76  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.295069  n/a   
 
 
-
 
NC_007005  Psyr_2315  histidine kinase, HAMP region: chemotaxis sensory transducer  33.98 
 
 
653 aa  280  5e-74  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.967368  normal 
 
 
-
 
NC_007575  Suden_0989  methyl-accepting chemotaxis sensory transducer  31.07 
 
 
720 aa  275  2.0000000000000002e-72  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1041  methyl-accepting chemotaxis sensory transducer  30.85 
 
 
661 aa  270  7e-71  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_0377  Nitrate and nitrite sensing domain protein  33.45 
 
 
661 aa  265  1e-69  Sulfurospirillum deleyianum DSM 6946  Bacteria  decreased coverage  0.000413313  n/a   
 
 
-
 
NC_010501  PputW619_2284  methyl-accepting chemotaxis sensory transducer  31.79 
 
 
653 aa  262  1e-68  Pseudomonas putida W619  Bacteria  normal  hitchhiker  0.00297466 
 
 
-
 
NC_007575  Suden_0983  methyl-accepting chemotaxis sensory transducer  32.18 
 
 
720 aa  262  1e-68  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_007575  Suden_0209  methyl-accepting chemotaxis sensory transducer  32.03 
 
 
658 aa  243  7e-63  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.603066  n/a   
 
 
-
 
NC_008740  Maqu_3269  methyl-accepting chemotaxis sensory transducer  29.98 
 
 
605 aa  228  2e-58  Marinobacter aquaeolei VT8  Bacteria  hitchhiker  0.000515244  n/a   
 
 
-
 
NC_009831  Ssed_3705  methyl-accepting chemotaxis sensory transducer  35.4 
 
 
541 aa  227  5.0000000000000005e-58  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0963791  normal 
 
 
-
 
NC_008740  Maqu_3099  methyl-accepting chemotaxis sensory transducer  31.28 
 
 
672 aa  227  6e-58  Marinobacter aquaeolei VT8  Bacteria  normal  0.500846  n/a   
 
 
-
 
NC_009831  Ssed_4463  methyl-accepting chemotaxis sensory transducer  45.94 
 
 
552 aa  227  6e-58  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.43301 
 
 
-
 
NC_011901  Tgr7_0580  putative methyl-accepting chemotaxis sensory transducer  40.64 
 
 
679 aa  222  1.9999999999999999e-56  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1251  methyl-accepting chemotaxis sensory transducer  30.19 
 
 
646 aa  221  3.9999999999999997e-56  Dickeya zeae Ech1591  Bacteria  normal  0.457093  n/a   
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  39.38 
 
 
713 aa  220  6e-56  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  46.15 
 
 
637 aa  220  7e-56  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  42.22 
 
 
636 aa  219  1e-55  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_013889  TK90_1029  methyl-accepting chemotaxis sensory transducer  42.03 
 
 
411 aa  219  1e-55  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  39.51 
 
 
712 aa  218  2.9999999999999998e-55  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_010506  Swoo_0808  methyl-accepting chemotaxis sensory transducer  39.43 
 
 
541 aa  217  5.9999999999999996e-55  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  40.06 
 
 
712 aa  216  7e-55  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_008700  Sama_2607  putative methyl-accepting chemotaxis sensory transducer  38.2 
 
 
541 aa  217  7e-55  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.00122932  normal 
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  40.95 
 
 
716 aa  216  9.999999999999999e-55  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_007492  Pfl01_4022  chemotaxis sensory transducer  39.14 
 
 
493 aa  216  1.9999999999999998e-54  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009456  VC0395_1007  hemolysin secretion protein HylB  37.96 
 
 
548 aa  214  2.9999999999999995e-54  Vibrio cholerae O395  Bacteria  normal  0.702356  n/a   
 
 
-
 
NC_011901  Tgr7_1324  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  49.03 
 
 
523 aa  213  7.999999999999999e-54  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.587106  n/a   
 
 
-
 
NC_010501  PputW619_3984  methyl-accepting chemotaxis sensory transducer  44.35 
 
 
688 aa  212  1e-53  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_013456  VEA_003896  methyl-accepting chemotaxis protein  35.93 
 
 
545 aa  213  1e-53  Vibrio sp. Ex25  Bacteria  decreased coverage  0.000288698  n/a   
 
 
-
 
NC_009092  Shew_2954  methyl-accepting chemotaxis sensory transducer  36.84 
 
 
620 aa  212  2e-53  Shewanella loihica PV-4  Bacteria  decreased coverage  0.000679912  normal 
 
 
-
 
NC_007912  Sde_2316  putative methyl-accepting chemotaxis sensory transducer  37.98 
 
 
548 aa  212  2e-53  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0208981 
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  38.84 
 
 
638 aa  211  4e-53  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_004578  PSPTO_3379  methyl-accepting chemotaxis protein  39.37 
 
 
559 aa  210  5e-53  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_2492  methyl-accepting chemotaxis sensory transducer  47.06 
 
 
572 aa  211  5e-53  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_2657  methyl-accepting chemotaxis sensory transducer  27.89 
 
 
646 aa  210  8e-53  Dickeya dadantii Ech703  Bacteria  normal  0.653915  n/a   
 
 
-
 
NC_008789  Hhal_0167  methyl-accepting chemotaxis sensory transducer  39.94 
 
 
540 aa  209  1e-52  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_0413  methyl-accepting chemotaxis sensory transducer  30.39 
 
 
653 aa  209  1e-52  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_07022  histidine kinase  35.08 
 
 
553 aa  209  1e-52  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009052  Sbal_1494  methyl-accepting chemotaxis sensory transducer  35.75 
 
 
548 aa  208  2e-52  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  41.44 
 
 
541 aa  207  3e-52  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_010501  PputW619_1254  methyl-accepting chemotaxis sensory transducer  38.68 
 
 
639 aa  207  5e-52  Pseudomonas putida W619  Bacteria  normal  0.523103  normal  0.0331864 
 
 
-
 
NC_009092  Shew_2952  methyl-accepting chemotaxis sensory transducer  41.36 
 
 
541 aa  207  5e-52  Shewanella loihica PV-4  Bacteria  hitchhiker  0.000751538  normal 
 
 
-
 
NC_008345  Sfri_0861  methyl-accepting chemotaxis sensory transducer  34.25 
 
 
542 aa  207  5e-52  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0982  methyl-accepting chemotaxis sensory transducer  25.9 
 
 
663 aa  207  5e-52  Marinomonas sp. MWYL1  Bacteria  normal  0.293812  normal 
 
 
-
 
NC_009831  Ssed_2783  methyl-accepting chemotaxisprotein  37.78 
 
 
690 aa  207  5e-52  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.468562 
 
 
-
 
NC_009901  Spea_4196  methyl-accepting chemotaxis sensory transducer  42.37 
 
 
552 aa  207  6e-52  Shewanella pealeana ATCC 700345  Bacteria  normal  0.14959  n/a   
 
 
-
 
NC_009997  Sbal195_3617  methyl-accepting chemotaxis sensory transducer  38.75 
 
 
554 aa  206  1e-51  Shewanella baltica OS195  Bacteria  normal  normal  0.964358 
 
 
-
 
NC_011663  Sbal223_3422  methyl-accepting chemotaxis sensory transducer with Cache sensor  38.46 
 
 
554 aa  205  2e-51  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_3924  methyl-accepting chemotaxis sensory transducer  39.69 
 
 
527 aa  205  3e-51  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_3768  chemotaxis sensory transducer  42.71 
 
 
560 aa  205  3e-51  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_0870  methyl-accepting chemotaxis sensory transducer  38.46 
 
 
554 aa  205  3e-51  Shewanella baltica OS155  Bacteria  normal  0.0571565  n/a   
 
 
-
 
NC_009783  VIBHAR_01753  hypothetical protein  39.94 
 
 
545 aa  205  3e-51  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011901  Tgr7_1674  methyl-accepting chemotaxis sensory transducer  38.02 
 
 
543 aa  204  3e-51  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_0492  methyl-accepting chemotaxis sensory transducer  30.26 
 
 
649 aa  204  4e-51  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_4190  methyl-accepting chemotaxis sensory transducer  42.39 
 
 
688 aa  204  4e-51  Pseudomonas putida GB-1  Bacteria  normal  0.251316  normal 
 
 
-
 
NC_007954  Sden_0712  chemotaxis sensory transducer  38.02 
 
 
541 aa  204  5e-51  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.0000566108  n/a   
 
 
-
 
NC_009439  Pmen_2650  methyl-accepting chemotaxis sensory transducer  35.97 
 
 
568 aa  204  6e-51  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_0080  methyl-accepting chemotaxis sensory transducer  38.02 
 
 
636 aa  204  6e-51  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_3494  methyl-accepting chemotaxis sensory transducer  38.18 
 
 
554 aa  203  7e-51  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3742  methyl-accepting chemotaxis sensory transducer  41.19 
 
 
620 aa  203  7e-51  Shewanella baltica OS195  Bacteria  normal  normal  0.35347 
 
 
-
 
NC_009092  Shew_0808  methyl-accepting chemotaxis sensory transducer  40 
 
 
554 aa  203  7e-51  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_0584  methyl-accepting chemotaxis protein  36.49 
 
 
524 aa  203  8e-51  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_013457  VEA_001423  methyl-accepting chemotaxis protein  40 
 
 
623 aa  203  8e-51  Vibrio sp. Ex25  Bacteria  normal  0.896179  n/a   
 
 
-
 
NC_009512  Pput_1257  methyl-accepting chemotaxis sensory transducer  41.3 
 
 
688 aa  203  9e-51  Pseudomonas putida F1  Bacteria  normal  0.124474  normal 
 
 
-
 
NC_002947  PP_2310  methyl-accepting chemotaxis sensory transducer  40.06 
 
 
492 aa  203  9.999999999999999e-51  Pseudomonas putida KT2440  Bacteria  normal  0.178377  decreased coverage  0.00000773933 
 
 
-
 
NC_008577  Shewana3_3299  methyl-accepting chemotaxis sensory transducer  35.61 
 
 
554 aa  202  9.999999999999999e-51  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_0691  methyl-accepting chemotaxis sensory transducer  41.19 
 
 
620 aa  202  9.999999999999999e-51  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_3459  methyl-accepting chemotaxis sensory transducer  40.06 
 
 
492 aa  202  9.999999999999999e-51  Pseudomonas putida F1  Bacteria  normal  hitchhiker  0.000433284 
 
 
-
 
NC_011769  DvMF_1114  methyl-accepting chemotaxis sensory transducer  29.08 
 
 
700 aa  202  9.999999999999999e-51  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.655641 
 
 
-
 
NC_009665  Shew185_3619  methyl-accepting chemotaxis sensory transducer  41.51 
 
 
620 aa  202  9.999999999999999e-51  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_3799  methyl-accepting chemotaxis sensory transducer  40 
 
 
527 aa  203  9.999999999999999e-51  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_3551  methyl-accepting chemotaxis sensory transducer  41.19 
 
 
620 aa  202  9.999999999999999e-51  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.00183884 
 
 
-
 
NC_002947  PP_1228  methyl-accepting chemotaxis transducer  42.12 
 
 
688 aa  202  1.9999999999999998e-50  Pseudomonas putida KT2440  Bacteria  normal  normal  0.739741 
 
 
-
 
NC_008700  Sama_2609  putative methyl-accepting chemotaxis sensory transducer  32.48 
 
 
621 aa  202  1.9999999999999998e-50  Shewanella amazonensis SB2B  Bacteria  normal  0.206567  normal 
 
 
-
 
NC_009439  Pmen_2000  methyl-accepting chemotaxis sensory transducer  39.26 
 
 
560 aa  202  1.9999999999999998e-50  Pseudomonas mendocina ymp  Bacteria  normal  0.0144557  normal  0.0324669 
 
 
-
 
NC_008321  Shewmr4_0583  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.77 
 
 
524 aa  202  1.9999999999999998e-50  Shewanella sp. MR-4  Bacteria  normal  normal  0.344402 
 
 
-
 
NC_008322  Shewmr7_3447  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.77 
 
 
524 aa  202  1.9999999999999998e-50  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_1998  methyl-accepting chemotaxis sensory transducer  44.26 
 
 
714 aa  201  3e-50  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.0164438 
 
 
-
 
NC_009438  Sputcn32_0619  methyl-accepting chemotaxis sensory transducer  41.4 
 
 
634 aa  201  3e-50  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_3728  methyl-accepting chemotaxis sensory transducer  40.33 
 
 
527 aa  201  3e-50  Shewanella sp. MR-4  Bacteria  normal  normal  0.436185 
 
 
-
 
NC_008577  Shewana3_3611  methyl-accepting chemotaxis sensory transducer  44.48 
 
 
634 aa  201  5e-50  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_4053  methyl-accepting chemotaxis protein  41.37 
 
 
634 aa  201  5e-50  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009438  Sputcn32_1396  methyl-accepting chemotaxis sensory transducer  35.75 
 
 
548 aa  201  5e-50  Shewanella putrefaciens CN-32  Bacteria  normal  0.664947  n/a   
 
 
-
 
NC_007954  Sden_1091  chemotaxis sensory transducer  37.78 
 
 
620 aa  200  6e-50  Shewanella denitrificans OS217  Bacteria  normal  0.0174472  n/a   
 
 
-
 
NC_009997  Sbal195_3908  methyl-accepting chemotaxis sensory transducer  38.29 
 
 
524 aa  200  7e-50  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
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