56 homologs were found in PanDaTox collection
for query gene Sama_0074 on replicon NC_008700
Organism: Shewanella amazonensis SB2B



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008700  Sama_0074  HAD-superfamily hydrolase, subfamily IA, variant 1 family protein  100 
 
 
226 aa  470  1e-132  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_0085  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  76.99 
 
 
226 aa  375  1e-103  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_0088  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  76.99 
 
 
226 aa  375  1e-103  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_0084  HAD-superfamily hydrolase, subfamily IA, variant 1 family protein  76.55 
 
 
226 aa  372  1e-102  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009997  Sbal195_0091  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  76.55 
 
 
226 aa  373  1e-102  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_4264  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  76.99 
 
 
226 aa  373  1e-102  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_0069  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  75.66 
 
 
226 aa  369  1e-101  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_0085  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  76.68 
 
 
226 aa  365  1e-100  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_0089  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  76.68 
 
 
226 aa  365  1e-100  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_0090  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  76.68 
 
 
226 aa  365  1e-100  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_3771  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  76.89 
 
 
225 aa  362  2e-99  Shewanella loihica PV-4  Bacteria  normal  0.166559  normal 
 
 
-
 
NC_009831  Ssed_4454  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  73.78 
 
 
225 aa  352  2e-96  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_4180  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  73.45 
 
 
226 aa  346  2e-94  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_4855  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  72.44 
 
 
225 aa  343  1e-93  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_3966  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  73.89 
 
 
226 aa  333  9e-91  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_0077  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  66.52 
 
 
225 aa  309  2e-83  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_1857  HAD family 2,3-diketo-5-methylthio-1-phosphopentane phosphatase  47.32 
 
 
227 aa  229  3e-59  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0326852  normal  0.421452 
 
 
-
 
NC_004578  PSPTO_2047  HAD-superfamily hydrolase  46.61 
 
 
227 aa  225  4e-58  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0777387  n/a   
 
 
-
 
NC_008463  PA14_42720  enolase-phosphatase  47.35 
 
 
225 aa  225  5e-58  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_3587  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  47.35 
 
 
225 aa  221  7e-57  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_1726  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  45.13 
 
 
227 aa  219  3e-56  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_23800  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  44.64 
 
 
227 aa  214  1e-54  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_1142  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  45.54 
 
 
229 aa  208  7e-53  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_009832  Spro_0943  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  42.6 
 
 
229 aa  202  2e-51  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_010159  YpAngola_A3330  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  42.99 
 
 
229 aa  201  1e-50  Yersinia pestis Angola  Bacteria  normal  normal  0.788555 
 
 
-
 
NC_010465  YPK_3320  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  42.99 
 
 
229 aa  201  1e-50  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_002977  MCA0797  HAD superfamily hydrolase  47.17 
 
 
227 aa  200  1e-50  Methylococcus capsulatus str. Bath  Bacteria  normal  0.0437994  n/a   
 
 
-
 
NC_013421  Pecwa_3456  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  41.26 
 
 
229 aa  200  2e-50  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_010730  SYO3AOP1_0245  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  42.86 
 
 
230 aa  199  3e-50  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_3181  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  42.53 
 
 
229 aa  199  3e-50  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_3302  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  41.7 
 
 
229 aa  196  3e-49  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_0919  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  40.81 
 
 
230 aa  190  2e-47  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_0909  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  43.95 
 
 
230 aa  185  5e-46  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_1854  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  44.39 
 
 
235 aa  182  3e-45  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.0977225  normal  0.251212 
 
 
-
 
NC_011901  Tgr7_2625  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  43.56 
 
 
224 aa  181  8e-45  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_0886  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  39.01 
 
 
236 aa  180  2e-44  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_06081  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  40.61 
 
 
232 aa  176  2e-43  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.307515  n/a   
 
 
-
 
NC_010717  PXO_00846  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  40.61 
 
 
232 aa  176  2e-43  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  hitchhiker  0.00945264  n/a   
 
 
-
 
NC_010577  XfasM23_1345  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  40.26 
 
 
232 aa  172  4e-42  Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_010513  Xfasm12_1412  enolase-phosphatase  40.26 
 
 
232 aa  172  6e-42  Xylella fastidiosa M12  Bacteria  normal  0.185542  n/a   
 
 
-
 
NC_011071  Smal_1780  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  43.06 
 
 
231 aa  170  2e-41  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.269926  normal  0.265772 
 
 
-
 
NC_007604  Synpcc7942_1994  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  40.85 
 
 
238 aa  163  2e-39  Synechococcus elongatus PCC 7942  Bacteria  normal  normal  0.567266 
 
 
-
 
NC_011126  HY04AAS1_1512  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  36.61 
 
 
221 aa  158  5e-38  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  0.317976  n/a   
 
 
-
 
NC_011365  Gdia_1413  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  37.07 
 
 
237 aa  148  6e-35  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal 
 
 
-
 
NC_009484  Acry_0019  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  37 
 
 
232 aa  148  9e-35  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_007513  Syncc9902_1846  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  32.62 
 
 
245 aa  145  3e-34  Synechococcus sp. CC9902  Bacteria  normal  n/a   
 
 
-
 
NC_008820  P9303_21781  putative enolase-phosphatase E-1  34.47 
 
 
240 aa  140  2e-32  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal  0.0917092 
 
 
-
 
NC_009485  BBta_2512  putative hydrolase  40.86 
 
 
230 aa  139  4e-32  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.341573  normal 
 
 
-
 
NC_013093  Amir_0985  2,3-diketo-5-methylthio-1- phosphopentanephosphat ase  35.75 
 
 
224 aa  135  7e-31  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_007516  Syncc9605_0489  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  33.33 
 
 
250 aa  134  1e-30  Synechococcus sp. CC9605  Bacteria  normal  0.226131  normal  0.360579 
 
 
-
 
NC_011697  PHATRDRAFT_31147  predicted protein  39.41 
 
 
559 aa  132  3e-30  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.0700452  n/a   
 
 
-
 
NC_009720  Xaut_2913  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  30 
 
 
221 aa  116  4e-25  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_009043  PICST_44113  predicted protein  34.02 
 
 
241 aa  112  6e-24  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  normal 
 
 
-
 
NC_013889  TK90_1789  enolase-phosphatase  25.37 
 
 
231 aa  89.7  3e-17  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.0590429  normal  0.022514 
 
 
-
 
NC_007484  Noc_2439  enolase-phosphatase-like  37.5 
 
 
112 aa  70.5  2e-11  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.91308  n/a   
 
 
-
 
NC_008609  Ppro_3203  hydrolase  25.34 
 
 
220 aa  44.3  0.001  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>