More than 300 homologs were found in PanDaTox collection
for query gene SNSL254_A3302 on replicon NC_011080
Organism: Salmonella enterica subsp. enterica serovar Newport str. SL254



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011094  SeSA_A3237  chromosome replication initiation inhibitor protein  100 
 
 
297 aa  608  1e-173  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C3299  chromosome replication initiation inhibitor protein  100 
 
 
297 aa  608  1e-173  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.335083  normal 
 
 
-
 
NC_011149  SeAg_B3225  chromosome replication initiation inhibitor protein  100 
 
 
297 aa  608  1e-173  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.0441076  n/a   
 
 
-
 
NC_011080  SNSL254_A3302  chromosome replication initiation inhibitor protein  100 
 
 
297 aa  608  1e-173  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.779303  normal 
 
 
-
 
NC_011205  SeD_A3404  chromosome replication initiation inhibitor protein  99.66 
 
 
297 aa  606  9.999999999999999e-173  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.269089  normal  0.216257 
 
 
-
 
CP001509  ECD_02747  chromosome replication initiation inhibitor protein  97.31 
 
 
297 aa  595  1e-169  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_0777  transcriptional regulator, ArgP, LysR family  97.31 
 
 
297 aa  595  1e-169  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A3074  chromosome replication initiation inhibitor protein  97.31 
 
 
297 aa  595  1e-169  Escherichia coli HS  Bacteria  normal  0.093516  n/a   
 
 
-
 
NC_009801  EcE24377A_3243  chromosome replication initiation inhibitor protein  97.31 
 
 
297 aa  595  1e-169  Escherichia coli E24377A  Bacteria  normal  0.361223  n/a   
 
 
-
 
NC_010658  SbBS512_E3336  chromosome replication initiation inhibitor protein  97.31 
 
 
297 aa  595  1e-169  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_3052  chromosome replication initiation inhibitor protein  97.31 
 
 
297 aa  595  1e-169  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_011353  ECH74115_4212  chromosome replication initiation inhibitor protein  97.31 
 
 
297 aa  595  1e-169  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.307213  normal 
 
 
-
 
NC_012892  B21_02710  hypothetical protein  97.31 
 
 
297 aa  595  1e-169  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_0794  chromosome replication initiation inhibitor protein  97.31 
 
 
297 aa  595  1e-169  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_3334  chromosome replication initiation inhibitor protein  95.29 
 
 
297 aa  581  1.0000000000000001e-165  Enterobacter sp. 638  Bacteria  normal  0.197754  normal 
 
 
-
 
NC_012880  Dd703_0559  chromosome replication initiation inhibitor protein  91.55 
 
 
297 aa  556  1e-157  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_3925  chromosome replication initiation inhibitor protein  92.26 
 
 
297 aa  557  1e-157  Serratia proteamaculans 568  Bacteria  normal  0.567079  normal 
 
 
-
 
NC_009708  YpsIP31758_0854  chromosome replication initiation inhibitor protein  92.26 
 
 
302 aa  556  1e-157  Yersinia pseudotuberculosis IP 31758  Bacteria  hitchhiker  0.00300239  n/a   
 
 
-
 
NC_010159  YpAngola_A3821  chromosome replication initiation inhibitor protein  92.26 
 
 
302 aa  556  1e-157  Yersinia pestis Angola  Bacteria  normal  0.353961  normal 
 
 
-
 
NC_010465  YPK_0857  chromosome replication initiation inhibitor protein  92.26 
 
 
302 aa  556  1e-157  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_3878  chromosome replication initiation inhibitor protein  90.54 
 
 
297 aa  550  1e-156  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_0518  chromosome replication initiation inhibitor protein  90.54 
 
 
297 aa  550  1e-156  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_3684  chromosome replication initiation inhibitor protein  90.54 
 
 
297 aa  551  1e-156  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_03558  chromosome replication initiation inhibitor protein  48.3 
 
 
313 aa  293  3e-78  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013456  VEA_002477  chromosome initiation inhibitor  47.32 
 
 
298 aa  288  6e-77  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A0034  chromosome replication initiation inhibitor protein  47.99 
 
 
298 aa  279  5e-74  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_1473  chromosome replication initiation inhibitor protein  45.95 
 
 
297 aa  278  9e-74  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008309  HS_1009  chromosome replication initiation inhibitor protein  46.69 
 
 
295 aa  271  9e-72  Haemophilus somnus 129PT  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_4135  chromosome replication initiation inhibitor protein  45.27 
 
 
298 aa  256  3e-67  Colwellia psychrerythraea 34H  Bacteria  normal  0.931472  n/a   
 
 
-
 
NC_008709  Ping_1012  chromosome replication initiation inhibitor protein  42.62 
 
 
298 aa  256  5e-67  Psychromonas ingrahamii 37  Bacteria  normal  0.245419  normal 
 
 
-
 
NC_008700  Sama_2987  chromosome replication initiation inhibitor protein  44.07 
 
 
299 aa  233  3e-60  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_2434  chromosome replication initiation inhibitor protein  43.66 
 
 
295 aa  219  3.9999999999999997e-56  Shewanella sediminis HAW-EB3  Bacteria  normal  0.609977  hitchhiker  0.000411507 
 
 
-
 
NC_011662  Tmz1t_3749  transcriptional regulator, ArgP, LysR family  42.66 
 
 
303 aa  218  1e-55  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_2173  chromosome replication initiation inhibitor protein  41.9 
 
 
297 aa  213  2.9999999999999995e-54  Shewanella woodyi ATCC 51908  Bacteria  normal  0.342879  normal 
 
 
-
 
NC_009092  Shew_1844  chromosome replication initiation inhibitor protein  41.98 
 
 
295 aa  207  2e-52  Shewanella loihica PV-4  Bacteria  normal  0.225634  normal  0.103464 
 
 
-
 
NC_009901  Spea_1974  chromosome replication initiation inhibitor protein  41.55 
 
 
296 aa  204  1e-51  Shewanella pealeana ATCC 700345  Bacteria  normal  0.0576454  n/a   
 
 
-
 
NC_009665  Shew185_2594  chromosome replication initiation inhibitor protein  40.27 
 
 
311 aa  201  9.999999999999999e-51  Shewanella baltica OS185  Bacteria  hitchhiker  0.000000186754  n/a   
 
 
-
 
NC_011663  Sbal223_1788  chromosome replication initiation inhibitor protein  39.93 
 
 
311 aa  201  9.999999999999999e-51  Shewanella baltica OS223  Bacteria  decreased coverage  0.0000000405332  unclonable  0.00000000000392786 
 
 
-
 
NC_009997  Sbal195_2671  chromosome replication initiation inhibitor protein  39.93 
 
 
311 aa  200  3e-50  Shewanella baltica OS195  Bacteria  decreased coverage  0.000215658  normal 
 
 
-
 
NC_008322  Shewmr7_2416  chromosome replication initiation inhibitor protein  39.6 
 
 
305 aa  200  3e-50  Shewanella sp. MR-7  Bacteria  normal  0.343193  hitchhiker  0.00112785 
 
 
-
 
NC_008321  Shewmr4_2344  chromosome replication initiation inhibitor protein  39.6 
 
 
305 aa  199  3.9999999999999996e-50  Shewanella sp. MR-4  Bacteria  normal  0.0367629  hitchhiker  0.0000000918792 
 
 
-
 
NC_008577  Shewana3_1652  chromosome replication initiation inhibitor protein  39.6 
 
 
305 aa  199  3.9999999999999996e-50  Shewanella sp. ANA-3  Bacteria  normal  0.963239  normal 
 
 
-
 
NC_007519  Dde_3474  chromosome replication initiation inhibitor protein  39.49 
 
 
316 aa  199  5e-50  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_2866  chromosome replication initiation inhibitor protein  39.47 
 
 
306 aa  198  1.0000000000000001e-49  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009656  PSPA7_4934  chromosome replication initiation inhibitor protein  41.11 
 
 
298 aa  198  1.0000000000000001e-49  Pseudomonas aeruginosa PA7  Bacteria  normal  0.72562  n/a   
 
 
-
 
NC_010086  Bmul_3312  chromosome replication initiation inhibitor protein  38.01 
 
 
301 aa  197  2.0000000000000003e-49  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.028913  normal  0.162228 
 
 
-
 
NC_009052  Sbal_2556  chromosome replication initiation inhibitor protein  39.6 
 
 
311 aa  196  3e-49  Shewanella baltica OS155  Bacteria  hitchhiker  0.0000319404  n/a   
 
 
-
 
NC_008463  PA14_56740  chromosome replication initiation inhibitor protein  41.11 
 
 
300 aa  195  7e-49  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_2123  chromosome replication initiation inhibitor protein  40.19 
 
 
320 aa  195  8.000000000000001e-49  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.876879 
 
 
-
 
NC_009438  Sputcn32_1698  chromosome replication initiation inhibitor protein  38.36 
 
 
309 aa  192  4e-48  Shewanella putrefaciens CN-32  Bacteria  normal  0.52148  n/a   
 
 
-
 
NC_007511  Bcep18194_B0180  chromosome replication initiation inhibitor protein  37.41 
 
 
301 aa  192  8e-48  Burkholderia sp. 383  Bacteria  normal  normal  0.240236 
 
 
-
 
NC_013173  Dbac_3445  transcriptional regulator, ArgP, LysR family  40.07 
 
 
321 aa  191  2e-47  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_010515  Bcenmc03_4796  chromosome replication initiation inhibitor protein  37.41 
 
 
301 aa  190  2.9999999999999997e-47  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.43549  normal 
 
 
-
 
NC_008061  Bcen_5388  chromosome replication initiation inhibitor protein  37.41 
 
 
301 aa  190  2.9999999999999997e-47  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_5473  chromosome replication initiation inhibitor protein  37.41 
 
 
301 aa  190  2.9999999999999997e-47  Burkholderia cenocepacia HI2424  Bacteria  normal  0.259043  normal  0.391167 
 
 
-
 
NC_009439  Pmen_1116  chromosome replication initiation inhibitor protein  40.77 
 
 
297 aa  189  4e-47  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.472937 
 
 
-
 
NC_008391  Bamb_4815  chromosome replication initiation inhibitor protein  37.41 
 
 
301 aa  188  8e-47  Burkholderia ambifaria AMMD  Bacteria  normal  0.173708  normal 
 
 
-
 
NC_010552  BamMC406_5362  chromosome replication initiation inhibitor protein  37.07 
 
 
301 aa  185  8e-46  Burkholderia ambifaria MC40-6  Bacteria  normal  0.217291  normal 
 
 
-
 
NC_007650  BTH_II2146  chromosome replication initiation inhibitor protein  36.52 
 
 
323 aa  184  1.0000000000000001e-45  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A0429  chromosome replication initiation inhibitor protein  36.18 
 
 
325 aa  183  2.0000000000000003e-45  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008784  BMASAVP1_0835  chromosome replication initiation inhibitor protein  36.18 
 
 
319 aa  183  4.0000000000000006e-45  Burkholderia mallei SAVP1  Bacteria  normal  0.0738995  n/a   
 
 
-
 
NC_006349  BMAA1833  chromosome replication initiation inhibitor protein  36.18 
 
 
325 aa  183  4.0000000000000006e-45  Burkholderia mallei ATCC 23344  Bacteria  normal  0.565601  n/a   
 
 
-
 
NC_008835  BMA10229_1126  chromosome replication initiation inhibitor protein  36.18 
 
 
325 aa  183  4.0000000000000006e-45  Burkholderia mallei NCTC 10229  Bacteria  normal  0.0698805  n/a   
 
 
-
 
NC_009079  BMA10247_A2099  chromosome replication initiation inhibitor protein  36.18 
 
 
325 aa  183  4.0000000000000006e-45  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1772  chromosome replication initiation inhibitor protein  35.84 
 
 
325 aa  181  1e-44  Burkholderia pseudomallei 1710b  Bacteria  normal  0.188561  n/a   
 
 
-
 
NC_009078  BURPS1106A_A0336  chromosome replication initiation inhibitor protein  35.84 
 
 
325 aa  181  1e-44  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009007  RSP_3862  chromosome replication initiation inhibitor protein  39.22 
 
 
299 aa  179  4e-44  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_2358  chromosome replication initiation inhibitor protein  36.36 
 
 
302 aa  179  4e-44  Desulfovibrio vulgaris DP4  Bacteria  normal  0.17613  normal  0.155084 
 
 
-
 
NC_007492  Pfl01_4483  chromosome replication initiation inhibitor protein  39.1 
 
 
297 aa  178  1e-43  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.111794 
 
 
-
 
NC_009431  Rsph17025_4249  chromosome replication initiation inhibitor protein  39.86 
 
 
298 aa  176  3e-43  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.373423  normal  0.150215 
 
 
-
 
NC_007963  Csal_2433  chromosome replication initiation inhibitor protein  38.6 
 
 
302 aa  176  6e-43  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_1337  chromosome replication initiation inhibitor protein  38.01 
 
 
290 aa  174  9.999999999999999e-43  Marinobacter aquaeolei VT8  Bacteria  normal  0.449997  n/a   
 
 
-
 
NC_004578  PSPTO_4361  chromosome initiation inhibitor  36.67 
 
 
299 aa  174  1.9999999999999998e-42  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_4012  transcriptional regulator, LysR family  41.11 
 
 
284 aa  174  1.9999999999999998e-42  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.725863 
 
 
-
 
NC_007908  Rfer_2058  chromosome replication initiation inhibitor protein  37.09 
 
 
303 aa  173  2.9999999999999996e-42  Rhodoferax ferrireducens T118  Bacteria  normal  0.215595  n/a   
 
 
-
 
NC_007005  Psyr_4057  chromosome replication initiation inhibitor protein  36.61 
 
 
299 aa  171  1e-41  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_0072  chromosome replication initiation inhibitor protein  36.75 
 
 
303 aa  171  1e-41  Acidovorax sp. JS42  Bacteria  normal  0.608118  normal 
 
 
-
 
NC_011992  Dtpsy_0091  chromosome replication initiation inhibitor protein  36.75 
 
 
303 aa  171  1e-41  Acidovorax ebreus TPSY  Bacteria  normal  0.730131  n/a   
 
 
-
 
NC_008782  Ajs_3162  chromosome replication initiation inhibitor protein  39.11 
 
 
303 aa  170  3e-41  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_009484  Acry_2774  chromosome replication initiation inhibitor protein  39.79 
 
 
295 aa  170  3e-41  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_2509  chromosome replication initiation inhibitor protein  39.11 
 
 
303 aa  170  3e-41  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_0132  chromosome replication initiation inhibitor protein  39.02 
 
 
305 aa  169  4e-41  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.350257 
 
 
-
 
NC_010322  PputGB1_4471  chromosome replication initiation inhibitor protein  36.93 
 
 
296 aa  167  1e-40  Pseudomonas putida GB-1  Bacteria  normal  normal  0.134322 
 
 
-
 
NC_010524  Lcho_0982  LysR family transcriptional regulator  36.33 
 
 
300 aa  167  2e-40  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_011989  Avi_3099  transcriptional regulator LysR family  36.86 
 
 
301 aa  167  2e-40  Agrobacterium vitis S4  Bacteria  normal  0.109242  n/a   
 
 
-
 
NC_013757  Gobs_0665  transcriptional regulator, LysR family  37.71 
 
 
299 aa  167  2.9999999999999998e-40  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.409403  n/a   
 
 
-
 
NC_010002  Daci_2836  chromosome replication initiation inhibitor protein  34.92 
 
 
301 aa  166  4e-40  Delftia acidovorans SPH-1  Bacteria  normal  0.284111  normal  0.240548 
 
 
-
 
NC_010501  PputW619_0983  chromosome replication initiation inhibitor protein  36.59 
 
 
296 aa  166  5.9999999999999996e-40  Pseudomonas putida W619  Bacteria  normal  hitchhiker  0.00028343 
 
 
-
 
NC_009040  Rsph17029_4178  chromosome replication initiation inhibitor protein  39.22 
 
 
299 aa  166  5.9999999999999996e-40  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.257723  normal  0.264843 
 
 
-
 
NC_007948  Bpro_0149  chromosome replication initiation inhibitor protein  36.91 
 
 
304 aa  165  8e-40  Polaromonas sp. JS666  Bacteria  normal  0.898117  normal 
 
 
-
 
NC_008781  Pnap_0095  chromosome replication initiation inhibitor protein  36.7 
 
 
304 aa  164  1.0000000000000001e-39  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.720683 
 
 
-
 
NC_002947  PP_0917  chromosome replication initiation inhibitor protein  36.93 
 
 
296 aa  164  2.0000000000000002e-39  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_0947  chromosome replication initiation inhibitor protein  40.07 
 
 
311 aa  164  2.0000000000000002e-39  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_009512  Pput_0956  chromosome replication initiation inhibitor protein  36.93 
 
 
296 aa  164  2.0000000000000002e-39  Pseudomonas putida F1  Bacteria  normal  0.480683  normal  0.474013 
 
 
-
 
NC_011365  Gdia_1399  chromosome replication initiation inhibitor protein  36.11 
 
 
300 aa  163  3e-39  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal 
 
 
-
 
NC_008686  Pden_1904  chromosome replication initiation inhibitor protein  38.66 
 
 
289 aa  163  3e-39  Paracoccus denitrificans PD1222  Bacteria  normal  normal  0.188746 
 
 
-
 
NC_010086  Bmul_5298  chromosome replication initiation inhibitor protein  37.09 
 
 
297 aa  162  5.0000000000000005e-39  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_1573  chromosome replication initiation inhibitor protein  36.86 
 
 
318 aa  162  8.000000000000001e-39  Acidovorax citrulli AAC00-1  Bacteria  normal  0.187685  normal 
 
 
-
 
NC_011369  Rleg2_2144  chromosome replication initiation inhibitor protein  36.5 
 
 
297 aa  162  9e-39  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.184842 
 
 
-
 
NC_007511  Bcep18194_B3139  chromosome replication initiation inhibitor protein  36.36 
 
 
297 aa  161  1e-38  Burkholderia sp. 383  Bacteria  normal  0.677329  normal 
 
 
-
 
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