20 homologs were found in PanDaTox collection
for query gene SNSL254_A2939 on replicon NC_011080
Organism: Salmonella enterica subsp. enterica serovar Newport str. SL254



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011080  SNSL254_A2939  zinc-finger protein  100 
 
 		 89 aa  187  5.999999999999999e-47  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  1  decreased coverage  6.930430000000001e-29 
 
 
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NC_011149  SeAg_B2802  zinc-finger protein  77.53 
 
 		 89 aa  153  8e-37  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  1  n/a   
 
 
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NC_010465  YPK_0895  transcriptional activator Ogr/delta  71.76 
 
 		 88 aa  144  6e-34  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.646461  n/a   
 
 
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NC_009784  VIBHAR_05018  hypothetical protein  59.74 
 
 		 83 aa  97.8  5e-20  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008322  Shewmr7_0718  phage transcriptional activator, Ogr/delta  55.41 
 
 		 82 aa  93.6  8e-19  Shewanella sp. MR-7  Bacteria  normal  1  normal  0.0220217 
 
 
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NC_009052  Sbal_1278  phage transcriptional activator, Ogr/delta  55.41 
 
 		 82 aa  90.5  6e-18  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
-
 
NC_011312  VSAL_I1024  phage zinc-binding transcriptional activator  52.05 
 
 		 154 aa  81.3  0.000000000000004  Aliivibrio salmonicida LFI1238  Bacteria  normal  1  n/a   
 
 
-
 
NC_008228  Patl_0692  phage transcriptional activator, Ogr/delta  40 
 
 		 81 aa  75.1  0.0000000000003  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_011883  Ddes_0237  transcriptional activator Ogr/delta  45.83 
 
 		 80 aa  68.9  0.00000000002  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  hitchhiker  0.000439463  n/a   
 
 
-
 
NC_009656  PSPA7_0358  phage transcriptional activator Ogr/delta  39.51 
 
 		 90 aa  68.2  0.00000000003  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_008751  Dvul_1475  phage transcriptional activator, Ogr/delta  53.85 
 
 		 79 aa  64.3  0.0000000005  Desulfovibrio vulgaris DP4  Bacteria  normal  0.0527212  normal  1 
 
 
-
 
NC_008751  Dvul_2769  phage transcriptional activator, Ogr/delta  50 
 
 		 80 aa  59.7  0.00000001  Desulfovibrio vulgaris DP4  Bacteria  normal  0.278918  normal  0.680282 
 
 
-
 
NC_012856  Rpic12D_3117  transcriptional activator Ogr/delta  46.38 
 
 		 88 aa  58.5  0.00000003  Ralstonia pickettii 12D  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009656  PSPA7_0359  zinc-finger protein  36.9 
 
 		 86 aa  55.8  0.0000002  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_003295  RSc0964  putative bacteriophage transcriptional activator-related transcription regulator protein  44.78 
 
 		 73 aa  54.7  0.0000004  Ralstonia solanacearum GMI1000  Bacteria  normal  0.809217  normal  1 
 
 
-
 
NC_007347  Reut_A2195  Phage transcriptional activator, Ogr/Delta  40.58 
 
 		 97 aa  54.3  0.0000006  Ralstonia eutropha JMP134  Bacteria  normal  1  n/a   
 
 
-
 
NC_010086  Bmul_4868  transcriptional activator Ogr/delta  31.65 
 
 		 82 aa  53.1  0.000001  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.547602  normal  0.181017 
 
 
-
 
NC_010508  Bcenmc03_0173  transcriptional activator Ogr/delta  31.65 
 
 		 82 aa  52.8  0.000002  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_003295  RSc1904  putative transcriptional activator transcription regulator protein  29.27 
 
 		 82 aa  42.7  0.002  Ralstonia solanacearum GMI1000  Bacteria  decreased coverage  0.00444501  normal  1 
 
 
-
 
NC_009436  Ent638_1360  phage transcriptional activator, Ogr/delta  38.64 
 
 		 71 aa  41.2  0.005  Enterobacter sp. 638  Bacteria  normal  1  normal  1 
 
 
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