17 homologs were found in PanDaTox collection
for query gene SNSL254_A2217 on replicon NC_011080
Organism: Salmonella enterica subsp. enterica serovar Newport str. SL254



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013757  Gobs_0284  Glycerol dehydratase  64.76 
 
 
564 aa  745  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_1031  Glycerol dehydratase  74.5 
 
 
553 aa  864  Sebaldella termitidis ATCC 33386  Bacteria  decreased coverage  0.00671582  n/a   
 
 
-
 
NC_011205  SeD_A2376  propanediol utilization dehydratase, large subunit  100 
 
 
554 aa  1150  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B2163  propanediol utilization dehydratase, large subunit  99.82 
 
 
554 aa  1149  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A2210  propanediol utilization dehydratase, large subunit  100 
 
 
554 aa  1150  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.897937  normal 
 
 
-
 
NC_011083  SeHA_C2263  propanediol utilization dehydratase large subunit  99.82 
 
 
554 aa  1149  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal  0.131408 
 
 
-
 
NC_011080  SNSL254_A2217  propanediol utilization dehydratase large subunit  100 
 
 
554 aa  1150  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_010320  Teth514_1953  glycerol dehydratase  69.8 
 
 
554 aa  795  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_2281  propanediol utilization dehydratase, large subunit  97.83 
 
 
554 aa  1128  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_009513  Lreu_1747  glycerol dehydratase  65.05 
 
 
558 aa  753  Lactobacillus reuteri DSM 20016  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_1004  glycerol dehydratase, alpha subunit  70.04 
 
 
554 aa  820  Clostridium perfringens SM101  Bacteria  normal  0.872763  n/a   
 
 
-
 
NC_008261  CPF_1173  coenzyme B12-dependent glycerol dehydratase, large subunit  70.04 
 
 
554 aa  820  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_5563  glycerol dehydratase  51.55 
 
 
746 aa  516  1e-145  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.811495  normal 
 
 
-
 
NC_009338  Mflv_1245  glycerol dehydratase  51.85 
 
 
746 aa  512  1e-144  Mycobacterium gilvum PYR-GCK  Bacteria  hitchhiker  0.00307379  decreased coverage  4.39875e-06 
 
 
-
 
NC_009077  Mjls_5335  glycerol dehydratase  51.12 
 
 
739 aa  508  1e-143  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008705  Mkms_5042  glycerol dehydratase  51.12 
 
 
739 aa  508  1e-143  Mycobacterium sp. KMS  Bacteria  normal  0.359522  normal 
 
 
-
 
NC_008146  Mmcs_4954  glycerol dehydratase  51.12 
 
 
739 aa  508  1e-143  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
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