7 homologs were found in PanDaTox collection
for query gene SNSL254_A1048 on replicon NC_011080
Organism: Salmonella enterica subsp. enterica serovar Newport str. SL254



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011080  SNSL254_A1048  hypothetical protein  100 
 
 
52 aa  107  5e-23  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  decreased coverage  0.00172615  hitchhiker  0.00000103589 
 
 
-
 
NC_011080  SNSL254_A2840  hypothetical protein  96.15 
 
 
52 aa  102  1e-21  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  decreased coverage  0.0000763539  normal  0.0219908 
 
 
-
 
NC_011094  SeSA_A2288  hypothetical protein  96.15 
 
 
52 aa  102  1e-21  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  decreased coverage  0.000000753586  normal  0.127461 
 
 
-
 
NC_011205  SeD_A1079  hypothetical protein  58.93 
 
 
56 aa  62.4  0.000000002  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  hitchhiker  0.000508403  hitchhiker  0.000000834559 
 
 
-
 
CP001509  ECD_01329  conserved hypothetical protein  40 
 
 
56 aa  42.7  0.002  Escherichia coli BL21(DE3)  Bacteria  normal  0.521708  n/a   
 
 
-
 
CP001637  EcDH1_2292  putative bacteriophage protein  40 
 
 
56 aa  42.7  0.002  Escherichia coli DH1  Bacteria  hitchhiker  0.000295766  n/a   
 
 
-
 
NC_012892  B21_01339  hypothetical protein  40 
 
 
56 aa  42.7  0.002  Escherichia coli BL21  Bacteria  normal  0.542135  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>