More than 300 homologs were found in PanDaTox collection
for query gene SERP1944 on replicon NC_002976
Organism: Staphylococcus epidermidis RP62A



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009487  SaurJH9_2376  EmrB/QacA family drug resistance transporter  72.2 
 
 
643 aa  931    Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_002976  SERP1944  EmrB/QacA family drug resistance transporter  100 
 
 
658 aa  1337    Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_2422  EmrB/QacA family drug resistance transporter  72.2 
 
 
643 aa  931    Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.845412  n/a   
 
 
-
 
NC_011772  BCG9842_B0561  drug resistance transporter, EmrB/QacA family  47.2 
 
 
599 aa  572  1.0000000000000001e-162  Bacillus cereus G9842  Bacteria  hitchhiker  0.0000151463  hitchhiker  0.00000000000000678179 
 
 
-
 
NC_005945  BAS4464  EmrB/QacA family drug resistance transporter  47.2 
 
 
599 aa  570  1e-161  Bacillus anthracis str. Sterne  Bacteria  normal  0.737474  n/a   
 
 
-
 
NC_005957  BT9727_4299  multidrug resistance protein B  47.05 
 
 
599 aa  569  1e-161  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.649426  n/a   
 
 
-
 
NC_007530  GBAA_4812  EmrB/QacA family drug resistance transporter  47.2 
 
 
599 aa  570  1e-161  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.127812  n/a   
 
 
-
 
NC_011773  BCAH820_4683  drug resistance transporter, EmrB/QacA family  46.89 
 
 
599 aa  570  1e-161  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  6.74665e-44 
 
 
-
 
NC_006274  BCZK4310  multidrug resistance protein B  46.89 
 
 
599 aa  568  1e-160  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A4676  drug resistance transporter, EmrB/QacA family  47.36 
 
 
599 aa  568  1e-160  Bacillus cereus B4264  Bacteria  hitchhiker  0.00195609  n/a   
 
 
-
 
NC_011658  BCAH187_A4692  drug resistance transporter, EmrB/QacA family  47.05 
 
 
599 aa  567  1e-160  Bacillus cereus AH187  Bacteria  hitchhiker  0.0000143582  n/a   
 
 
-
 
NC_010184  BcerKBAB4_4399  EmrB/QacA family drug resistance transporter  47.74 
 
 
597 aa  564  1.0000000000000001e-159  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.00696651  n/a   
 
 
-
 
NC_003909  BCE_4699  EmrB/QacA family drug resistance transporter  54.51 
 
 
599 aa  558  1e-158  Bacillus cereus ATCC 10987  Bacteria  normal  0.0449963  n/a   
 
 
-
 
NC_009674  Bcer98_3254  EmrB/QacA family drug resistance transporter  55.31 
 
 
579 aa  558  1e-157  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_2448  drug resistance transporter, EmrB/QacA subfamily  50.1 
 
 
570 aa  526  1e-148  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012793  GWCH70_1833  drug resistance transporter, EmrB/QacA subfamily  48.17 
 
 
564 aa  513  1e-144  Geobacillus sp. WCH70  Bacteria  normal  0.0281974  n/a   
 
 
-
 
NC_013205  Aaci_2428  drug resistance transporter, EmrB/QacA subfamily  48.09 
 
 
561 aa  488  1e-136  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.0683901  n/a   
 
 
-
 
NC_013205  Aaci_2909  drug resistance transporter, EmrB/QacA subfamily  44.36 
 
 
635 aa  469  1.0000000000000001e-131  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  hitchhiker  0.000610887  n/a   
 
 
-
 
NC_003909  BCE_3194  EmrB/QacA family drug resistance transporter  44.27 
 
 
484 aa  401  9.999999999999999e-111  Bacillus cereus ATCC 10987  Bacteria  normal  0.794509  n/a   
 
 
-
 
NC_010184  BcerKBAB4_2739  EmrB/QacA family drug resistance transporter  43.52 
 
 
482 aa  399  9.999999999999999e-111  Bacillus weihenstephanensis KBAB4  Bacteria  unclonable  0.00000169232  n/a   
 
 
-
 
NC_005957  BT9727_2982  multidrug resistance protein B  42.66 
 
 
492 aa  394  1e-108  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS2994  EmrB/QacA family drug resistance transporter  42.25 
 
 
492 aa  390  1e-107  Bacillus anthracis str. Sterne  Bacteria  normal  0.218586  n/a   
 
 
-
 
NC_006274  BCZK2922  multidrug resistance protein B  42.25 
 
 
492 aa  391  1e-107  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B2014  drug resistance transporter, EmrB/QacA family  40.84 
 
 
513 aa  390  1e-107  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_007530  GBAA_3223  EmrB/QacA family drug resistance transporter  42.25 
 
 
492 aa  390  1e-107  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.0356226  n/a   
 
 
-
 
NC_011658  BCAH187_A3251  drug resistance transporter, EmrB/QacA family  42.51 
 
 
492 aa  389  1e-107  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A3232  drug resistance transporter, EmrB/QacA family  40.84 
 
 
513 aa  390  1e-107  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_3230  drug resistance transporter, EmrB/QacA family  42.25 
 
 
492 aa  392  1e-107  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_003909  BCE_3240  EmrB/QacA family drug resistance transporter  42.25 
 
 
492 aa  389  1e-106  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_2937  EmrB/QacA family drug resistance transporter  41.25 
 
 
492 aa  384  1e-105  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.486174  n/a   
 
 
-
 
NC_013172  Bfae_22510  drug resistance transporter, EmrB/QacA subfamily  40.56 
 
 
494 aa  377  1e-103  Brachybacterium faecium DSM 4810  Bacteria  normal  0.319093  n/a   
 
 
-
 
NC_008530  LGAS_0725  major facilitator superfamily permease  39.84 
 
 
490 aa  375  1e-102  Lactobacillus gasseri ATCC 33323  Bacteria  normal  normal  0.29773 
 
 
-
 
NC_008528  OEOE_0877  major facilitator superfamily permease  39.88 
 
 
496 aa  368  1e-100  Oenococcus oeni PSU-1  Bacteria  normal  0.192576  n/a   
 
 
-
 
NC_009513  Lreu_1519  EmrB/QacA family drug resistance transporter  38.12 
 
 
502 aa  351  2e-95  Lactobacillus reuteri DSM 20016  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0959  permease, general substrate transporter  39.05 
 
 
482 aa  339  9.999999999999999e-92  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0281229  n/a   
 
 
-
 
NC_006274  BCZK0949  permease, general substrate transporter  38.76 
 
 
482 aa  337  2.9999999999999997e-91  Bacillus cereus E33L  Bacteria  hitchhiker  0.00000025972  n/a   
 
 
-
 
NC_005945  BAS0971  EmrB/QacA family drug resistance transporter  38.84 
 
 
482 aa  337  3.9999999999999995e-91  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_1038  EmrB/QacA family drug resistance transporter  38.84 
 
 
482 aa  337  3.9999999999999995e-91  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_1116  drug resistance transporter, EmrB/QacA family  38.76 
 
 
482 aa  336  7.999999999999999e-91  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.000271146 
 
 
-
 
NC_013204  Elen_2489  drug resistance transporter, EmrB/QacA subfamily  44.2 
 
 
657 aa  336  9e-91  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_002976  SERP2340  EmrB/QacA family drug resistance transporter  38.32 
 
 
472 aa  333  9e-90  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_2326  drug resistance transporter, EmrB/QacA subfamily  33.94 
 
 
579 aa  328  2.0000000000000001e-88  Desulfotomaculum acetoxidans DSM 771  Bacteria  unclonable  0.0000000685947  hitchhiker  0.0026086 
 
 
-
 
NC_005945  BAS0888  EmrB/QacA family drug resistance transporter  37.43 
 
 
486 aa  326  6e-88  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0944  EmrB/QacA family drug resistance transporter  37.43 
 
 
486 aa  326  6e-88  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_002976  SERP1766  EmrB/QacA family drug resistance transporter  38.97 
 
 
479 aa  326  1e-87  Staphylococcus epidermidis RP62A  Bacteria  normal  0.239731  n/a   
 
 
-
 
NC_008531  LEUM_1863  major facilitator superfamily permease  41.04 
 
 
465 aa  325  2e-87  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  0.0147099  n/a   
 
 
-
 
NC_011658  BCAH187_A1003  lincomycin resistance protein LmrB  39.42 
 
 
480 aa  324  4e-87  Bacillus cereus AH187  Bacteria  normal  0.2001  n/a   
 
 
-
 
NC_011773  BCAH820_1028  drug resistance transporter, EmrB/QacA family  37.28 
 
 
491 aa  323  4e-87  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.10576e-22 
 
 
-
 
NC_006274  BCZK0734  lincomycin resistance protein  39.42 
 
 
480 aa  323  6e-87  Bacillus cereus E33L  Bacteria  normal  0.498733  n/a   
 
 
-
 
NC_011725  BCB4264_A0988  drug resistance transporter, EmrB/QacA family  36.92 
 
 
491 aa  322  9.999999999999999e-87  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_010816  BLD_0659  permease of the major facilitator superfamily  33.58 
 
 
683 aa  320  6e-86  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A1115  drug resistance transporter, EmrB/QacA family  36.84 
 
 
491 aa  319  7.999999999999999e-86  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0845  EmrB/QacA family drug resistance transporter  37.8 
 
 
491 aa  319  1e-85  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4325  drug resistance transporter, EmrB/QacA family  37.55 
 
 
491 aa  317  4e-85  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_009632  SaurJH1_2236  EmrB/QacA family drug resistance transporter  40.12 
 
 
481 aa  315  9.999999999999999e-85  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.126562  n/a   
 
 
-
 
NC_009487  SaurJH9_2198  EmrB/QacA family drug resistance transporter  40.12 
 
 
481 aa  315  9.999999999999999e-85  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.0460557  n/a   
 
 
-
 
NC_009253  Dred_0455  EmrB/QacA family drug resistance transporter  34.73 
 
 
514 aa  315  1.9999999999999998e-84  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_2440  EmrB/QacA family drug resistance transporter  36.14 
 
 
479 aa  315  1.9999999999999998e-84  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_2488  EmrB/QacA family drug resistance transporter  36.14 
 
 
479 aa  315  1.9999999999999998e-84  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_009524  PsycPRwf_1468  EmrB/QacA family drug resistance transporter  37.25 
 
 
491 aa  312  1e-83  Psychrobacter sp. PRwf-1  Bacteria  normal  0.986472  normal  0.151461 
 
 
-
 
NC_009972  Haur_1459  EmrB/QacA family drug resistance transporter  36.85 
 
 
483 aa  301  3e-80  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.257317  n/a   
 
 
-
 
NC_014210  Ndas_2424  drug resistance transporter, EmrB/QacA subfamily  34.19 
 
 
496 aa  300  4e-80  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.153591 
 
 
-
 
NC_004116  SAG1707  EmrB/QacA family drug resistance transporter  36.31 
 
 
499 aa  300  6e-80  Streptococcus agalactiae 2603V/R  Bacteria  decreased coverage  0.00395265  n/a   
 
 
-
 
NC_007644  Moth_2324  EmrB/QacA family drug resistance transporter  34.09 
 
 
534 aa  297  3e-79  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.937948  normal 
 
 
-
 
NC_008541  Arth_0161  EmrB/QacA family drug resistance transporter  34.44 
 
 
494 aa  296  9e-79  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_0326  drug resistance transporter, EmrB/QacA subfamily  35.67 
 
 
490 aa  293  7e-78  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_009972  Haur_2761  EmrB/QacA family drug resistance transporter  36.15 
 
 
545 aa  293  7e-78  Herpetosiphon aurantiacus ATCC 23779  Bacteria  unclonable  0.00000648651  n/a   
 
 
-
 
NC_008527  LACR_1383  major facilitator superfamily permease  36.43 
 
 
519 aa  293  9e-78  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.601618  n/a   
 
 
-
 
NC_009664  Krad_0268  drug resistance transporter, EmrB/QacA subfamily  33.86 
 
 
500 aa  281  3e-74  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0312698  decreased coverage  0.00157172 
 
 
-
 
NC_013172  Bfae_05820  drug resistance transporter, EmrB/QacA subfamily  34.49 
 
 
510 aa  280  5e-74  Brachybacterium faecium DSM 4810  Bacteria  normal  0.835158  n/a   
 
 
-
 
NC_010816  BLD_0998  putative permease  34.83 
 
 
548 aa  278  3e-73  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_008531  LEUM_1880  major facilitator superfamily permease  36.61 
 
 
503 aa  274  4.0000000000000004e-72  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  n/a   
 
 
-
 
NC_013721  HMPREF0424_0354  drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family protein  37.7 
 
 
542 aa  272  2e-71  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_013385  Adeg_0100  drug resistance transporter, EmrB/QacA subfamily  34.46 
 
 
524 aa  271  4e-71  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1686  drug resistance transporter, EmrB/QacA subfamily  36.51 
 
 
620 aa  270  7e-71  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.892029  n/a   
 
 
-
 
NC_013521  Sked_06270  drug resistance transporter, EmrB/QacA subfamily  35.34 
 
 
490 aa  269  1e-70  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0845  drug resistance transporter, EmrB/QacA subfamily  35.97 
 
 
489 aa  265  2e-69  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.222515  normal  0.167552 
 
 
-
 
NC_014158  Tpau_3099  drug resistance transporter, EmrB/QacA subfamily  35.08 
 
 
491 aa  265  3e-69  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_008528  OEOE_1378  major facilitator superfamily permease  34.5 
 
 
512 aa  252  2e-65  Oenococcus oeni PSU-1  Bacteria  normal  0.0602023  n/a   
 
 
-
 
NC_013159  Svir_30030  drug resistance transporter, EmrB/QacA subfamily  31.75 
 
 
487 aa  249  9e-65  Saccharomonospora viridis DSM 43017  Bacteria  decreased coverage  0.00171806  normal 
 
 
-
 
NC_013172  Bfae_02600  drug resistance transporter, EmrB/QacA subfamily  33.02 
 
 
505 aa  240  5.999999999999999e-62  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009513  Lreu_1318  EmrB/QacA family drug resistance transporter  31.91 
 
 
465 aa  238  3e-61  Lactobacillus reuteri DSM 20016  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_1298  drug resistance transporter, EmrB/QacA subfamily  32.79 
 
 
500 aa  236  1.0000000000000001e-60  Cellulomonas flavigena DSM 20109  Bacteria  decreased coverage  0.000893352  hitchhiker  0.00471574 
 
 
-
 
NC_013170  Ccur_11090  drug resistance transporter, EmrB/QacA subfamily  34.41 
 
 
640 aa  235  2.0000000000000002e-60  Cryptobacterium curtum DSM 15641  Bacteria  decreased coverage  0.000431734  normal 
 
 
-
 
NC_013530  Xcel_3361  drug resistance transporter, EmrB/QacA subfamily  35.02 
 
 
492 aa  232  2e-59  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013170  Ccur_08630  drug resistance transporter, EmrB/QacA subfamily  31.38 
 
 
509 aa  231  4e-59  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal  0.315329 
 
 
-
 
NC_012917  PC1_3331  drug resistance transporter, EmrB/QacA subfamily  29.27 
 
 
511 aa  228  3e-58  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.0816524  n/a   
 
 
-
 
NC_010333  Caul_5403  EmrB/QacA family drug resistance transporter  28.6 
 
 
537 aa  225  2e-57  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_2019  drug resistance transporter, EmrB/QacA subfamily  30.27 
 
 
524 aa  225  2e-57  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_0617  EmrB/QacA family drug resistance transporter  29.17 
 
 
543 aa  224  4.9999999999999996e-57  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_3487  drug resistance transporter, EmrB/QacA subfamily  29.02 
 
 
511 aa  224  6e-57  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_0557  drug resistance transporter, EmrB/QacA subfamily  29.06 
 
 
526 aa  223  8e-57  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.362761  normal 
 
 
-
 
NC_009513  Lreu_1299  major facilitator transporter  33.33 
 
 
479 aa  223  9.999999999999999e-57  Lactobacillus reuteri DSM 20016  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_1309  drug resistance transporter, EmrB/QacA subfamily  27.98 
 
 
528 aa  223  9.999999999999999e-57  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.576525 
 
 
-
 
NC_013739  Cwoe_4177  drug resistance transporter, EmrB/QacA subfamily  30.8 
 
 
522 aa  221  1.9999999999999999e-56  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_3317  EmrB/QacA family drug resistance transporter  28.81 
 
 
526 aa  222  1.9999999999999999e-56  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.135478 
 
 
-
 
NC_013204  Elen_2667  drug resistance transporter, EmrB/QacA subfamily  30.16 
 
 
485 aa  220  7e-56  Eggerthella lenta DSM 2243  Bacteria  normal  0.0905281  normal  0.424193 
 
 
-
 
NC_013510  Tcur_1972  drug resistance transporter, EmrB/QacA subfamily  30.66 
 
 
510 aa  220  7.999999999999999e-56  Thermomonospora curvata DSM 43183  Bacteria  normal  0.073103  n/a   
 
 
-
 
NC_013947  Snas_5520  drug resistance transporter, EmrB/QacA subfamily  34.2 
 
 
502 aa  219  1e-55  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_011145  AnaeK_2290  drug resistance transporter, EmrB/QacA subfamily  26.65 
 
 
529 aa  217  4e-55  Anaeromyxobacter sp. K  Bacteria  normal  0.192526  n/a   
 
 
-
 
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