More than 300 homologs were found in PanDaTox collection
for query gene SERP0889 on replicon NC_002976
Organism: Staphylococcus epidermidis RP62A



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002976  SERP0889  LuxR family DNA-binding response regulator  100 
 
 
200 aa  406  1.0000000000000001e-112  Staphylococcus epidermidis RP62A  Bacteria  hitchhiker  0.0000916195  n/a   
 
 
-
 
NC_009487  SaurJH9_1383  two component LuxR family transcriptional regulator  69.5 
 
 
200 aa  295  2e-79  Staphylococcus aureus subsp. aureus JH9  Bacteria  hitchhiker  0.00000320378  n/a   
 
 
-
 
NC_009632  SaurJH1_1410  response regulator receiver  69.5 
 
 
200 aa  295  2e-79  Staphylococcus aureus subsp. aureus JH1  Bacteria  hitchhiker  0.000440417  n/a   
 
 
-
 
NC_008532  STER_1290  DNA-binding response regulator  47.24 
 
 
200 aa  198  3.9999999999999996e-50  Streptococcus thermophilus LMD-9  Bacteria  normal  0.29796  n/a   
 
 
-
 
NC_009674  Bcer98_3871  two component LuxR family transcriptional regulator  43.5 
 
 
200 aa  178  4e-44  Bacillus cytotoxicus NVH 391-98  Bacteria  hitchhiker  0.00685623  n/a   
 
 
-
 
NC_011725  BCB4264_A5475  DNA-binding response regulator  43 
 
 
200 aa  174  7e-43  Bacillus cereus B4264  Bacteria  normal  0.132453  n/a   
 
 
-
 
NC_005945  BAS5200  DNA-binding response regulator  43 
 
 
200 aa  174  9.999999999999999e-43  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A5531  DNA-binding response regulator  43 
 
 
200 aa  173  9.999999999999999e-43  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5597  DNA-binding response regulator  43 
 
 
200 aa  174  9.999999999999999e-43  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_5482  DNA-binding response regulator  42.5 
 
 
200 aa  173  1.9999999999999998e-42  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B5477  DNA-binding response regulator  42.5 
 
 
200 aa  173  1.9999999999999998e-42  Bacillus cereus G9842  Bacteria  hitchhiker  0.00156963  hitchhiker  0.00000000000102018 
 
 
-
 
NC_005957  BT9727_5034  DNA-binding response regulator  43 
 
 
200 aa  172  2.9999999999999996e-42  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.617082  n/a   
 
 
-
 
NC_011773  BCAH820_5444  DNA-binding response regulator  43 
 
 
200 aa  172  2.9999999999999996e-42  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_010184  BcerKBAB4_5150  two component LuxR family transcriptional regulator  42 
 
 
200 aa  172  2.9999999999999996e-42  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK5050  DNA-binding response regulator  42.5 
 
 
200 aa  172  3.9999999999999995e-42  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_008347  Mmar10_2543  two component LuxR family transcriptional regulator  37.5 
 
 
202 aa  158  6e-38  Maricaulis maris MCS10  Bacteria  normal  0.446643  normal 
 
 
-
 
NC_011071  Smal_0258  two component transcriptional regulator, LuxR family  35.5 
 
 
200 aa  156  2e-37  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_012803  Mlut_16250  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  37 
 
 
224 aa  155  3e-37  Micrococcus luteus NCTC 2665  Bacteria  normal  0.216822  n/a   
 
 
-
 
NC_011365  Gdia_1908  two component transcriptional regulator, LuxR family  37.81 
 
 
201 aa  154  1e-36  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal  0.264232 
 
 
-
 
NC_011138  MADE_03365  DNA-binding response regulator, LuxR family protein  35.18 
 
 
205 aa  153  2e-36  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_2068  two component transcriptional regulator, LuxR family  36 
 
 
212 aa  152  4e-36  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.385073  normal  0.894995 
 
 
-
 
NC_013946  Mrub_1264  two component LuxR family transcriptional regulator  39.5 
 
 
200 aa  152  4e-36  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.86401 
 
 
-
 
NC_013159  Svir_02200  two component transcriptional regulator, LuxR family  35.18 
 
 
208 aa  151  5.9999999999999996e-36  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_007912  Sde_3820  two component LuxR family transcriptional regulator  37.56 
 
 
205 aa  150  1e-35  Saccharophagus degradans 2-40  Bacteria  normal  0.113202  normal 
 
 
-
 
NC_013739  Cwoe_4753  two component transcriptional regulator, LuxR family  34.83 
 
 
201 aa  148  5e-35  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.226774 
 
 
-
 
NC_013131  Caci_0763  two component transcriptional regulator, LuxR family  35.32 
 
 
208 aa  146  2.0000000000000003e-34  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.313515 
 
 
-
 
NC_014165  Tbis_1720  LuxR family two component transcriptional regulator  35.32 
 
 
201 aa  144  6e-34  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_3506  two component LuxR family transcriptional regulator  34.17 
 
 
198 aa  143  2e-33  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_4055  response regulator receiver protein  35.32 
 
 
201 aa  142  3e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0367887 
 
 
-
 
NC_013205  Aaci_0655  two component transcriptional regulator, LuxR family  32.5 
 
 
200 aa  142  4e-33  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_2957  two component transcriptional regulator, LuxR family  33.33 
 
 
201 aa  141  6e-33  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00144362  n/a   
 
 
-
 
NC_008025  Dgeo_0183  two component LuxR family transcriptional regulator  35.5 
 
 
200 aa  140  9.999999999999999e-33  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.541303  normal  0.654013 
 
 
-
 
NC_007333  Tfu_0288  LuxR response regulator receiver  33.83 
 
 
201 aa  140  1.9999999999999998e-32  Thermobifida fusca YX  Bacteria  normal  0.0935286  n/a   
 
 
-
 
NC_013595  Sros_0091  response regulator receiver protein  34.16 
 
 
204 aa  140  1.9999999999999998e-32  Streptosporangium roseum DSM 43021  Bacteria  normal  0.520551  normal 
 
 
-
 
NC_013235  Namu_3006  two component transcriptional regulator, LuxR family  33 
 
 
204 aa  139  3.9999999999999997e-32  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.000248543  hitchhiker  0.000146029 
 
 
-
 
NC_014211  Ndas_5200  two component transcriptional regulator, LuxR family  31.34 
 
 
223 aa  138  4.999999999999999e-32  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0156716  normal  0.415255 
 
 
-
 
NC_013172  Bfae_06340  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  32.23 
 
 
211 aa  138  6e-32  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_1641  two component transcriptional regulator, LuxR family  34.33 
 
 
201 aa  137  1e-31  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_3654  two component transcriptional regulator, LuxR family  32.84 
 
 
201 aa  135  3.0000000000000003e-31  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0345388 
 
 
-
 
NC_013521  Sked_06600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  34.83 
 
 
200 aa  135  5e-31  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.680692  normal 
 
 
-
 
NC_010506  Swoo_4591  two component LuxR family transcriptional regulator  32.49 
 
 
198 aa  133  1.9999999999999998e-30  Shewanella woodyi ATCC 51908  Bacteria  normal  unclonable  0.00000001788 
 
 
-
 
NC_007954  Sden_3475  response regulator receiver  33.65 
 
 
207 aa  132  3e-30  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_4572  two component transcriptional regulator, LuxR family  32.84 
 
 
200 aa  132  3e-30  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.318618  normal  0.115695 
 
 
-
 
NC_008345  Sfri_0357  two component transcriptional regulator, LuxR family protein  33.66 
 
 
202 aa  132  3e-30  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_0195  two component LuxR family transcriptional regulator  33.5 
 
 
205 aa  132  3.9999999999999996e-30  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.116105 
 
 
-
 
NC_013595  Sros_8146  response regulator receiver protein  32.67 
 
 
202 aa  130  9e-30  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.524184 
 
 
-
 
NC_013510  Tcur_1624  two component transcriptional regulator, LuxR family  34.83 
 
 
201 aa  130  1.0000000000000001e-29  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0305603  n/a   
 
 
-
 
NC_013093  Amir_1937  two component transcriptional regulator, LuxR family  33.83 
 
 
201 aa  130  1.0000000000000001e-29  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_0118  two component transcriptional regulator, LuxR family  31 
 
 
205 aa  130  2.0000000000000002e-29  Jonesia denitrificans DSM 20603  Bacteria  normal  0.137239  normal  0.184056 
 
 
-
 
NC_014165  Tbis_0907  LuxR family two component transcriptional regulator  33.17 
 
 
197 aa  130  2.0000000000000002e-29  Thermobispora bispora DSM 43833  Bacteria  normal  0.365102  normal 
 
 
-
 
NC_013595  Sros_1680  response regulator receiver protein  31.84 
 
 
197 aa  129  2.0000000000000002e-29  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.516841 
 
 
-
 
NC_009665  Shew185_0345  two component LuxR family transcriptional regulator  32.16 
 
 
198 aa  129  3e-29  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_0322  two component LuxR family transcriptional regulator  32.66 
 
 
198 aa  129  3e-29  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_0347  two component LuxR family transcriptional regulator  32.16 
 
 
198 aa  129  3e-29  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_013169  Ksed_00990  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  29.85 
 
 
201 aa  129  3e-29  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.666199  normal 
 
 
-
 
NC_012669  Bcav_0286  two component transcriptional regulator, LuxR family  33 
 
 
203 aa  129  3e-29  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.784033  normal  0.130384 
 
 
-
 
NC_009997  Sbal195_0352  two component LuxR family transcriptional regulator  32.16 
 
 
198 aa  128  4.0000000000000003e-29  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_3621  two component LuxR family transcriptional regulator  32.66 
 
 
198 aa  129  4.0000000000000003e-29  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_3818  two component LuxR family transcriptional regulator  32.66 
 
 
198 aa  129  4.0000000000000003e-29  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_6441  response regulator receiver protein  32.34 
 
 
227 aa  129  4.0000000000000003e-29  Streptosporangium roseum DSM 43021  Bacteria  normal  0.176234  normal  0.0893652 
 
 
-
 
NC_004347  SO_0351  LuxR family DNA-binding response regulator  32.16 
 
 
198 aa  128  6e-29  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011663  Sbal223_0355  two component transcriptional regulator, LuxR family  32.16 
 
 
198 aa  128  6e-29  Shewanella baltica OS223  Bacteria  normal  0.881439  hitchhiker  0.0000000668977 
 
 
-
 
NC_012669  Bcav_1588  two component transcriptional regulator, LuxR family  30.35 
 
 
201 aa  127  2.0000000000000002e-28  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.117504  normal 
 
 
-
 
NC_013159  Svir_11510  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  32.34 
 
 
203 aa  126  2.0000000000000002e-28  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.575058  normal 
 
 
-
 
NC_013131  Caci_1897  two component transcriptional regulator, LuxR family  30 
 
 
200 aa  125  4.0000000000000003e-28  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.299419  normal 
 
 
-
 
NC_013131  Caci_0691  two component transcriptional regulator, LuxR family  34.21 
 
 
190 aa  125  4.0000000000000003e-28  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_03860  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  31.53 
 
 
204 aa  124  1e-27  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0649288  normal  0.281143 
 
 
-
 
NC_013595  Sros_4598  response regulator receiver protein  32.34 
 
 
201 aa  124  1e-27  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.053163 
 
 
-
 
NC_013510  Tcur_2770  two component transcriptional regulator, LuxR family  30.35 
 
 
201 aa  123  2e-27  Thermomonospora curvata DSM 43183  Bacteria  normal  0.282039  n/a   
 
 
-
 
NC_009921  Franean1_0528  two component LuxR family transcriptional regulator  31.34 
 
 
201 aa  123  2e-27  Frankia sp. EAN1pec  Bacteria  normal  0.653057  normal 
 
 
-
 
NC_014210  Ndas_1079  two component transcriptional regulator, LuxR family  31.5 
 
 
200 aa  123  2e-27  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.782019  normal  0.0499592 
 
 
-
 
NC_013947  Snas_0503  two component transcriptional regulator, LuxR family  32.5 
 
 
202 aa  121  7e-27  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.900292 
 
 
-
 
NC_014158  Tpau_3534  two component transcriptional regulator, LuxR family  30.58 
 
 
206 aa  120  1.9999999999999998e-26  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_4334  response regulator receiver protein  33.33 
 
 
200 aa  119  3.9999999999999996e-26  Streptosporangium roseum DSM 43021  Bacteria  normal  0.574495  normal  0.636855 
 
 
-
 
NC_013235  Namu_2610  two component transcriptional regulator, LuxR family  38.89 
 
 
144 aa  119  3.9999999999999996e-26  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00000438854  normal  0.0112001 
 
 
-
 
NC_013739  Cwoe_5628  two component transcriptional regulator, LuxR family  30.35 
 
 
200 aa  116  1.9999999999999998e-25  Conexibacter woesei DSM 14684  Bacteria  normal  0.946433  normal  0.876589 
 
 
-
 
NC_011725  BCB4264_A2245  DNA-binding response regulator, LuxR family  30.43 
 
 
213 aa  116  1.9999999999999998e-25  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_1808  two component transcriptional regulator, LuxR family  31.84 
 
 
201 aa  116  1.9999999999999998e-25  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.207018 
 
 
-
 
NC_011658  BCAH187_A2375  DNA-binding response regulator, LuxR family  31.22 
 
 
209 aa  115  3e-25  Bacillus cereus AH187  Bacteria  normal  0.248491  n/a   
 
 
-
 
NC_010184  BcerKBAB4_2087  two component LuxR family transcriptional regulator  30.43 
 
 
213 aa  115  5e-25  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0358431  n/a   
 
 
-
 
NC_014210  Ndas_0782  two component transcriptional regulator, LuxR family  27.44 
 
 
220 aa  114  7.999999999999999e-25  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_2293  LuxR family DNA-binding response regulator  30.62 
 
 
211 aa  114  1.0000000000000001e-24  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B3078  DNA-binding response regulator, LuxR family  29.95 
 
 
213 aa  114  1.0000000000000001e-24  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.000000185138 
 
 
-
 
NC_014248  Aazo_0236  LuxR family two component transcriptional regulator  30.48 
 
 
218 aa  114  1.0000000000000001e-24  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS2109  LuxR family DNA-binding response regulator  30.24 
 
 
209 aa  112  3e-24  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_2048  response regulator  30.24 
 
 
209 aa  112  3e-24  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.102554  n/a   
 
 
-
 
NC_006274  BCZK2046  response regulator  30.24 
 
 
209 aa  112  3e-24  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_2265  LuxR family DNA-binding response regulator  30.24 
 
 
209 aa  112  3e-24  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.201191  n/a   
 
 
-
 
NC_011773  BCAH820_2290  DNA-binding response regulator, LuxR family  30.24 
 
 
209 aa  112  3e-24  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.00000000000000736213 
 
 
-
 
NC_008148  Rxyl_1550  two component LuxR family transcriptional regulator  28.17 
 
 
220 aa  110  2.0000000000000002e-23  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1910  response regulator receiver protein  26.51 
 
 
226 aa  109  3e-23  Streptosporangium roseum DSM 43021  Bacteria  normal  0.238062  normal  0.36963 
 
 
-
 
NC_013595  Sros_6161  response regulator receiver protein  27.7 
 
 
221 aa  108  6e-23  Streptosporangium roseum DSM 43021  Bacteria  normal  0.902987  decreased coverage  0.000109123 
 
 
-
 
NC_010814  Glov_1561  two component transcriptional regulator, LuxR family  32.26 
 
 
199 aa  108  6e-23  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2804  two component transcriptional regulator, LuxR family  27.96 
 
 
216 aa  107  9.000000000000001e-23  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.995251  normal  0.311692 
 
 
-
 
NC_008010  Dgeo_2486  two component LuxR family transcriptional regulator  28.64 
 
 
208 aa  107  1e-22  Deinococcus geothermalis DSM 11300  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_2042  two component LuxR family transcriptional regulator  31.28 
 
 
208 aa  106  2e-22  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_4258  two component LuxR family transcriptional regulator  27.88 
 
 
216 aa  107  2e-22  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_2469  two component transcriptional regulator, LuxR family  26.92 
 
 
214 aa  107  2e-22  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.126163  normal 
 
 
-
 
NC_012669  Bcav_0588  two component transcriptional regulator, LuxR family  26.5 
 
 
204 aa  107  2e-22  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal 
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  30.2 
 
 
216 aa  105  4e-22  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
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