More than 300 homologs were found in PanDaTox collection
for query gene Rxyl_0160 on replicon NC_008148
Organism: Rubrobacter xylanophilus DSM 9941



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008148  Rxyl_0160  two component LuxR family transcriptional regulator  100 
 
 
212 aa  414  9.999999999999999e-116  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_1051  two component transcriptional regulator, LuxR family  62.14 
 
 
211 aa  256  2e-67  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.0337978 
 
 
-
 
NC_013946  Mrub_1071  two component LuxR family transcriptional regulator  63.11 
 
 
209 aa  254  8e-67  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1684  response regulator receiver protein  61.76 
 
 
207 aa  244  4.9999999999999997e-64  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.966789 
 
 
-
 
NC_013131  Caci_0175  two component transcriptional regulator, LuxR family  59.72 
 
 
222 aa  238  5.999999999999999e-62  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_0277  response regulator receiver protein  59.33 
 
 
214 aa  235  4e-61  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_0615  two component transcriptional regulator, LuxR family  63.29 
 
 
216 aa  234  6e-61  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_0606  two component transcriptional regulator, LuxR family  62.8 
 
 
212 aa  234  7e-61  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_0928  response regulator receiver protein  60.87 
 
 
207 aa  234  9e-61  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0707495  normal 
 
 
-
 
NC_012669  Bcav_3541  two component transcriptional regulator, LuxR family  58.54 
 
 
211 aa  233  1.0000000000000001e-60  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.485125  normal  0.513005 
 
 
-
 
NC_014151  Cfla_2683  two component transcriptional regulator, LuxR family  60.29 
 
 
209 aa  233  1.0000000000000001e-60  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_0827  response regulator receiver protein  61.95 
 
 
217 aa  231  4.0000000000000004e-60  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7346  two component transcriptional regulator, LuxR family  61.65 
 
 
211 aa  228  6e-59  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0451998 
 
 
-
 
NC_014210  Ndas_0346  two component transcriptional regulator, LuxR family  61.84 
 
 
210 aa  226  1e-58  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0205277  normal  0.823307 
 
 
-
 
NC_013595  Sros_0074  response regulator receiver protein  58.82 
 
 
207 aa  226  2e-58  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_1030  two component transcriptional regulator, LuxR family  59.11 
 
 
212 aa  226  2e-58  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_29940  two component transcriptional regulator, LuxR family  57.84 
 
 
234 aa  225  5.0000000000000005e-58  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.683883 
 
 
-
 
NC_013093  Amir_0513  two component transcriptional regulator, LuxR family  64.22 
 
 
209 aa  220  1.9999999999999999e-56  Actinosynnema mirum DSM 43827  Bacteria  normal  0.52986  n/a   
 
 
-
 
NC_014211  Ndas_4922  two component transcriptional regulator, LuxR family  56.86 
 
 
206 aa  219  3e-56  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0302523  normal 
 
 
-
 
NC_013947  Snas_2579  two component transcriptional regulator, LuxR family  57 
 
 
213 aa  218  6e-56  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.0500394 
 
 
-
 
NC_013595  Sros_4744  response regulator receiver protein  55.45 
 
 
209 aa  216  1e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  0.620464  normal  0.690137 
 
 
-
 
NC_013235  Namu_4606  two component transcriptional regulator, LuxR family  57.28 
 
 
207 aa  216  2e-55  Nakamurella multipartita DSM 44233  Bacteria  normal  normal  0.296562 
 
 
-
 
NC_013441  Gbro_2881  response regulator receiver  54.93 
 
 
220 aa  214  9.999999999999999e-55  Gordonia bronchialis DSM 43247  Bacteria  decreased coverage  0.00126066  n/a   
 
 
-
 
NC_011886  Achl_3380  two component transcriptional regulator, LuxR family  56.22 
 
 
222 aa  211  7e-54  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013131  Caci_6980  two component transcriptional regulator, LuxR family  53.92 
 
 
213 aa  211  9e-54  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.999676 
 
 
-
 
NC_013947  Snas_3811  two component transcriptional regulator, LuxR family  56.04 
 
 
206 aa  208  6e-53  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  hitchhiker  0.00252848 
 
 
-
 
NC_008025  Dgeo_0555  two component LuxR family transcriptional regulator  54.07 
 
 
228 aa  206  2e-52  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0717  two component transcriptional regulator, LuxR family  53.62 
 
 
209 aa  203  1e-51  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.854815  normal  0.189113 
 
 
-
 
NC_011886  Achl_0642  two component transcriptional regulator, LuxR family  56.08 
 
 
208 aa  201  7e-51  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013595  Sros_1936  response regulator receiver protein  55.83 
 
 
205 aa  201  9.999999999999999e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  50.71 
 
 
218 aa  199  1.9999999999999998e-50  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_008148  Rxyl_2511  two component LuxR family transcriptional regulator  49.54 
 
 
229 aa  197  1.0000000000000001e-49  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_1600  two component LuxR family transcriptional regulator  48.54 
 
 
207 aa  195  4.0000000000000005e-49  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_4147  two component LuxR family transcriptional regulator  56.36 
 
 
218 aa  193  2e-48  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  47.96 
 
 
224 aa  191  8e-48  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_008541  Arth_0485  two component LuxR family transcriptional regulator  53.44 
 
 
208 aa  190  1e-47  Arthrobacter sp. FB24  Bacteria  normal  0.0855535  n/a   
 
 
-
 
NC_011831  Cagg_0340  two component transcriptional regulator, LuxR family  50 
 
 
217 aa  189  2e-47  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00614189  hitchhiker  0.00317709 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  49.32 
 
 
226 aa  188  4e-47  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_011884  Cyan7425_1929  two component transcriptional regulator, LuxR family  49.53 
 
 
209 aa  189  4e-47  Cyanothece sp. PCC 7425  Bacteria  normal  0.142226  normal 
 
 
-
 
NC_009972  Haur_2171  two component LuxR family transcriptional regulator  48.34 
 
 
218 aa  188  5.999999999999999e-47  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.0762379  n/a   
 
 
-
 
NC_013172  Bfae_00310  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  50 
 
 
213 aa  187  7e-47  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_1316  two component transcriptional regulator, LuxR family  44.5 
 
 
210 aa  186  2e-46  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_014248  Aazo_0236  LuxR family two component transcriptional regulator  49.02 
 
 
218 aa  186  3e-46  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_2028  two component LuxR family transcriptional regulator  45.89 
 
 
219 aa  185  6e-46  Anabaena variabilis ATCC 29413  Bacteria  normal  0.515359  normal 
 
 
-
 
NC_008699  Noca_2635  response regulator receiver  49.26 
 
 
207 aa  184  7e-46  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_007412  Ava_C0116  two component LuxR family transcriptional regulator  47.17 
 
 
209 aa  183  2.0000000000000003e-45  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  47.71 
 
 
226 aa  182  5.0000000000000004e-45  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_013525  Tter_0300  two component transcriptional regulator, LuxR family  44.04 
 
 
224 aa  181  6e-45  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  42.52 
 
 
216 aa  181  6e-45  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_4227  two component LuxR family transcriptional regulator  50.48 
 
 
213 aa  181  9.000000000000001e-45  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.624898 
 
 
-
 
NC_013235  Namu_5018  two component transcriptional regulator, LuxR family  50.52 
 
 
209 aa  180  2e-44  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_012803  Mlut_18530  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  53.37 
 
 
209 aa  179  2e-44  Micrococcus luteus NCTC 2665  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_1160  two component LuxR family transcriptional regulator  43.54 
 
 
210 aa  180  2e-44  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_2629  two component LuxR family transcriptional regulator  48.4 
 
 
232 aa  179  2.9999999999999997e-44  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.312922  n/a   
 
 
-
 
NC_013525  Tter_1109  two component transcriptional regulator, LuxR family  44.81 
 
 
218 aa  179  4e-44  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  47.22 
 
 
224 aa  178  4e-44  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_011725  BCB4264_A1495  DNA-binding response regulator  43.54 
 
 
210 aa  179  4e-44  Bacillus cereus B4264  Bacteria  unclonable  0.0000174821  n/a   
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  48.6 
 
 
220 aa  178  5.999999999999999e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_013526  Tter_2548  two component transcriptional regulator, LuxR family  46.01 
 
 
218 aa  177  8e-44  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A5535  DNA-binding response regulator  44.39 
 
 
215 aa  177  1e-43  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_2340  two component transcriptional regulator, LuxR family  49.76 
 
 
217 aa  177  1e-43  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.273151  normal 
 
 
-
 
NC_009972  Haur_1309  two component LuxR family transcriptional regulator  52.68 
 
 
206 aa  177  1e-43  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.000148999  n/a   
 
 
-
 
NC_003909  BCE_1563  DNA-binding response regulator  43.54 
 
 
210 aa  177  2e-43  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.0000000942452  n/a   
 
 
-
 
NC_005945  BAS1348  DNA-binding response regulator  43.54 
 
 
210 aa  177  2e-43  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.0000440829  n/a   
 
 
-
 
NC_005957  BT9727_1322  response regulator  43.54 
 
 
210 aa  177  2e-43  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  7.30192e-17  n/a   
 
 
-
 
NC_007530  GBAA_1457  DNA-binding response regulator  43.54 
 
 
210 aa  177  2e-43  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  0.0000538049  n/a   
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  47.49 
 
 
227 aa  176  2e-43  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_010571  Oter_2926  two component LuxR family transcriptional regulator  46.6 
 
 
223 aa  176  2e-43  Opitutus terrae PB90-1  Bacteria  normal  0.380263  normal 
 
 
-
 
NC_011658  BCAH187_A5591  DNA-binding response regulator  43.93 
 
 
215 aa  176  2e-43  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1363  two component LuxR family transcriptional regulator  43.54 
 
 
210 aa  177  2e-43  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.0039551  n/a   
 
 
-
 
NC_011658  BCAH187_A1601  DNA-binding response regulator  43.54 
 
 
210 aa  177  2e-43  Bacillus cereus AH187  Bacteria  unclonable  0.00000000136266  n/a   
 
 
-
 
NC_013946  Mrub_0806  two component LuxR family transcriptional regulator  44.5 
 
 
216 aa  176  3e-43  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  45.79 
 
 
218 aa  176  3e-43  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5205  two component LuxR family transcriptional regulator  43.93 
 
 
215 aa  176  3e-43  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B3849  DNA-binding response regulator  43.06 
 
 
210 aa  176  3e-43  Bacillus cereus G9842  Bacteria  decreased coverage  0.0000000308683  hitchhiker  0.000000000350245 
 
 
-
 
NC_005945  BAS5263  DNA-binding response regulator  44.39 
 
 
215 aa  175  4e-43  Bacillus anthracis str. Sterne  Bacteria  normal  0.24037  n/a   
 
 
-
 
NC_005957  BT9727_5091  response regulator  44.39 
 
 
215 aa  175  4e-43  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK5108  response regulator  44.39 
 
 
215 aa  175  4e-43  Bacillus cereus E33L  Bacteria  decreased coverage  0.00235048  n/a   
 
 
-
 
NC_007530  GBAA_5661  DNA-binding response regulator  44.39 
 
 
215 aa  175  4e-43  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_5506  DNA-binding response regulator  44.39 
 
 
215 aa  175  4e-43  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  44.55 
 
 
229 aa  175  4e-43  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_3359  two component transcriptional regulator, LuxR family  45.54 
 
 
219 aa  175  5e-43  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0172663  normal 
 
 
-
 
NC_003909  BCE_5540  DNA-binding response regulator  43.93 
 
 
215 aa  175  5e-43  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_2482  two component transcriptional regulator, LuxR family  52.17 
 
 
208 aa  175  5e-43  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0211915  normal  0.642006 
 
 
-
 
NC_011884  Cyan7425_1401  two component transcriptional regulator, LuxR family  48.79 
 
 
217 aa  175  5e-43  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.482316 
 
 
-
 
NC_013947  Snas_4662  two component transcriptional regulator, LuxR family  47.42 
 
 
221 aa  174  6e-43  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.142047  hitchhiker  0.00679998 
 
 
-
 
NC_011773  BCAH820_1531  DNA-binding response regulator  43.06 
 
 
210 aa  174  6e-43  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  8.64189e-24 
 
 
-
 
NC_010338  Caul_0621  two component LuxR family transcriptional regulator  48.54 
 
 
212 aa  175  6e-43  Caulobacter sp. K31  Bacteria  normal  normal  0.881689 
 
 
-
 
NC_011772  BCG9842_B5417  DNA-binding response regulator  44.39 
 
 
215 aa  175  6e-43  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_1039  two component LuxR family transcriptional regulator  44.04 
 
 
238 aa  174  7e-43  Frankia sp. CcI3  Bacteria  normal  normal  0.135118 
 
 
-
 
NC_014151  Cfla_2842  two component transcriptional regulator, LuxR family  47.77 
 
 
226 aa  174  7e-43  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.622781  decreased coverage  0.00305681 
 
 
-
 
NC_013131  Caci_7843  two component transcriptional regulator, LuxR family  46.26 
 
 
231 aa  174  8e-43  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.176081 
 
 
-
 
NC_007644  Moth_0975  two component LuxR family transcriptional regulator  42.13 
 
 
222 aa  174  8e-43  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_006274  BCZK1321  response regulator  43.06 
 
 
210 aa  173  9.999999999999999e-43  Bacillus cereus E33L  Bacteria  hitchhiker  0.00000332221  n/a   
 
 
-
 
NC_011884  Cyan7425_3249  two component transcriptional regulator, LuxR family  46 
 
 
211 aa  173  9.999999999999999e-43  Cyanothece sp. PCC 7425  Bacteria  normal  0.414819  normal  0.558116 
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  46.51 
 
 
217 aa  173  9.999999999999999e-43  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000794288  unclonable  0.0000000332591 
 
 
-
 
NC_013595  Sros_1417  response regulator receiver protein  42.86 
 
 
234 aa  174  9.999999999999999e-43  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0224272 
 
 
-
 
NC_013093  Amir_6405  two component transcriptional regulator, LuxR family  47.22 
 
 
225 aa  173  9.999999999999999e-43  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_2443  two component LuxR family transcriptional regulator  42.65 
 
 
215 aa  173  1.9999999999999998e-42  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_009455  DehaBAV1_0632  two component LuxR family transcriptional regulator  42.13 
 
 
224 aa  173  1.9999999999999998e-42  Dehalococcoides sp. BAV1  Bacteria  hitchhiker  0.00385785  n/a   
 
 
-
 
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